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[Python] Show call site in deprecation warnings
For warnings from pure Python methods, we need the 'stacklevel=2' argument to show the call in the users' code. For Cythonized methods, the default 'stacklevel=1' gives the desired result because the Cython method is not visible as part of the Python stacktrace.
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@ -1203,7 +1203,7 @@ class SolutionArray(SolutionArrayBase):
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`write_csv` does not support escaping of commas within string entries.
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"""
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warnings.warn("SolutionArray.write_csv: Superseded by 'save' and will be removed "
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"after Cantera 3.0.", DeprecationWarning)
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"after Cantera 3.0.", DeprecationWarning, stacklevel=2)
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data_dict = self.collect_data(*args, cols=cols, tabular=True, **kwargs)
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data = np.hstack([d[:, np.newaxis] for d in data_dict.values()])
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labels = list(data_dict.keys())
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@ -1433,7 +1433,7 @@ class SolutionArray(SolutionArrayBase):
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warnings.warn("SolutionArray.write_hdf: To be removed after Cantera 3.0; use "
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"'save' instead.\n Note that the call is redirected to 'save' in order to "
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"prevent the creation of a file with legacy HDF format;\nas a consequence, "
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"some options are no longer supported.", DeprecationWarning)
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"some options are no longer supported.", DeprecationWarning, stacklevel=2)
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if group is None:
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raise KeyError("Missing required parameter 'group'.")
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@ -1477,7 +1477,7 @@ class SolutionArray(SolutionArrayBase):
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_import_h5py()
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warnings.warn("SolutionArray.read_hdf: Method to be removed after Cantera 3.0; "
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"use 'restore' instead.", DeprecationWarning)
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"use 'restore' instead.", DeprecationWarning, stacklevel=2)
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with _h5py.File(filename, 'r') as hdf:
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@ -55,7 +55,7 @@ class FlameBase(Sim1D):
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export to the C++ core, this method is unused.
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"""
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warnings.warn("FlameBase.other_components: Method to be removed after "
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"Cantera 3.0 (unused).", DeprecationWarning)
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"Cantera 3.0 (unused).", DeprecationWarning, stacklevel=2)
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if domain is None:
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return self._other
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@ -385,7 +385,8 @@ class FlameBase(Sim1D):
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Replaceable by `profile` or `value`.
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"""
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warnings.warn("FlameBase.solution: To be removed after Cantera 3.0. "
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"Replaceable by 'profile' or 'value'.", DeprecationWarning)
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"Replaceable by 'profile' or 'value'.", DeprecationWarning,
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stacklevel=2)
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if point is None:
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return self.profile(self.flame, component)
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else:
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@ -422,7 +423,7 @@ class FlameBase(Sim1D):
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Method to be removed after Cantera 3.0; superseded by `save`.
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"""
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warnings.warn("FlameBase.write_csv: Superseded by 'save'. To be removed "
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"after Cantera 3.0.", DeprecationWarning)
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"after Cantera 3.0.", DeprecationWarning, stacklevel=2)
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# save data
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cols = ('extra', 'T', 'D', species)
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@ -466,7 +467,7 @@ class FlameBase(Sim1D):
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Method to be removed after Cantera 3.0; superseded by `to_array`.
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"""
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warnings.warn("FlameBase.to_solution_array: To be removed after Cantera 3.0. "
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"Replaceable by 'to_array'.", DeprecationWarning)
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"Replaceable by 'to_array'.", DeprecationWarning, stacklevel=2)
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return self.to_array(domain, normalize)
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def from_array(self, arr, domain=None):
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@ -497,7 +498,7 @@ class FlameBase(Sim1D):
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Method to be removed after Cantera 3.0; replaced by `from_array`.
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"""
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warnings.warn("FlameBase.from_solution_array: To be removed after Cantera 3.0. "
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"Replaced by 'from_array'.", DeprecationWarning)
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"Replaced by 'from_array'.", DeprecationWarning, stacklevel=2)
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if domain is None:
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domain = self.flame
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else:
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@ -636,7 +637,7 @@ class FlameBase(Sim1D):
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warnings.warn("FlameBase.write_hdf: To be removed after Cantera 3.0; use "
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"'save' instead.\nNote that the call is redirected to 'save' in order to "
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"prevent the creation of a file with deprecated HDF format.",
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DeprecationWarning)
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DeprecationWarning, stacklevel=2)
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self.save(filename, name=group, description=description,
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compression=compression_opts)
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@ -665,7 +666,7 @@ class FlameBase(Sim1D):
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Method to be removed after Cantera 3.0; superseded by `restore`.
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"""
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warnings.warn("FlameBase.read_hdf: To be removed after Cantera 3.0; use "
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"'restore' instead.", DeprecationWarning)
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"'restore' instead.", DeprecationWarning, stacklevel=2)
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if restore_boundaries:
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domains = range(3)
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@ -693,7 +694,7 @@ class FlameBase(Sim1D):
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`Domain1D.settings`; for the setter, use setters for individual settings.
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"""
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warnings.warn("FlameBase.settings: to be removed after Cantera 3.0. Access "
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"settings from domains instead.", DeprecationWarning)
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"settings from domains instead.", DeprecationWarning, stacklevel=2)
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out = {'Sim1D_type': type(self).__name__}
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out['transport_model'] = self.transport_model
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out['energy_enabled'] = self.energy_enabled
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@ -709,7 +710,7 @@ class FlameBase(Sim1D):
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@settings.setter
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def settings(self, s):
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warnings.warn("FlameBase.settings: To be removed after Cantera 3.0. Use "
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"individual setters instead.", DeprecationWarning)
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"individual setters instead.", DeprecationWarning, stacklevel=2)
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# simple setters
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attr = {'transport_model',
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'energy_enabled', 'soret_enabled', 'radiation_enabled',
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@ -1045,7 +1046,7 @@ class IonFreeFlame(FreeFlame):
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def __init__(self, gas, grid=None, width=None):
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warnings.warn(
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"'IonFreeFlame' is deprecated and will be removed after Cantera 3.0;",
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"replaceable by 'FreeFlame'.", DeprecationWarning)
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"replaceable by 'FreeFlame'.", DeprecationWarning, stacklevel=2)
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super().__init__(gas, grid, width)
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@ -1199,7 +1200,7 @@ class IonBurnerFlame(BurnerFlame):
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def __init__(self, gas, grid=None, width=None):
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warnings.warn(
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"'IonBurnerFlame' is deprecated and will be removed after Cantera 3.0; ",
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"replaceable by 'BurnerFlame'.", DeprecationWarning)
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"replaceable by 'BurnerFlame'.", DeprecationWarning, stacklevel=2)
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super().__init__(gas, grid, width)
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