openbabel/java at 9d2edcdea12d76d5c33d6fa5d8123a019947d47d - openbabel - Git Repository of IntenseWebs.com, IF.Finance, IWeb.City, NuKVM.org, OilfieldTools Network, Spartan International Drilling, Green Polymer Products & more

GreenPolyProducts/openbabel

mirror of https://github.com/openbabel/openbabel.git synced 2025-02-25 18:55:23 -06:00

Files

History

Geoffrey Hutchison 9d2edcdea1 Regenerate Makefiles to eliminate some build problems.

2007-01-04 13:49:27 +00:00

..

atomreftype.java

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CharPtrLess.java

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DataSource.java

Updates for recent changes.

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FastSearch.java

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FastSearchIndexer.java

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FptIndex.java

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FptIndexHeader.java

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matrix3x3.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

OBAngle.java

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OBAngleData.java

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OBAromaticTyper.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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OBAtom.java

Updates for recent changes.

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OBAtomAtomIter.java

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OBAtomBondIter.java

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OBAtomTyper.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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OBBase.java

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OBBitVec.java

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OBBond.java

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OBChainsParser.java

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OBChiralData.java

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OBCommentData.java

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OBConformerData.java

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OBConversion.java

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OBElement.java

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OBElementTable.java

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OBError.java

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OBExternalBond.java

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OBExternalBondData.java

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OBFingerprint.java

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OBFormat.java

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OBGenericData.java

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OBGlobalDataBase.java

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OBIsotopeTable.java

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obLogBuf.java

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OBMessageHandler.java

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obMessageLevel.java

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OBMol.java

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OBMolAngleIter.java

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OBMolAtomBFSIter.java

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OBMolAtomDFSIter.java

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OBMolAtomIter.java

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OBMolBondIter.java

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OBMolPairIter.java

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OBMolRingIter.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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OBMolTorsionIter.java

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OBPairData.java

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OBResidue.java

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OBResidueAtomIter.java

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OBResidueData.java

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OBResidueIter.java

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OBRing.java

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OBRingData.java

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OBRingSearch.java

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OBRTree.java

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OBSerialNums.java

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OBSetData.java

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OBSmartsPattern.java

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OBSqrtTbl.java

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OBSSMatch.java

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OBStopwatch.java

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OBSymmetryData.java

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OBTorsion.java

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OBTorsionData.java

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OBTypeTable.java

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OBUnitCell.java

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OBVirtualBond.java

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openbabel_java.cpp

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openbabel.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

openbabelConstants.java

Updates for recent changes.

2006-12-28 19:51:38 +00:00

openbabelJNI.java

Regenerate Makefiles to eliminate some build problems.

2007-01-04 13:49:27 +00:00

README

Updates for Java targets.

2006-12-15 15:36:18 +00:00

SWIGTYPE_p_a_3__double.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_a_4__char.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_char.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_double.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_int.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_OpenBabel__FMapType__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_OpenBabel__OBInternalCoord.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_OpenBabel__OBRandom.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_OpenBabel__Pattern.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_OpenBabel__quadTOpenBabel__OBAtom_p_OpenBabel__OBAtom_p_OpenBabel__OBAtom_p_OpenBabel__OBAtom_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_OpenBabel__tripleTOpenBabel__OBAtom_p_OpenBabel__OBAtom_p_OpenBabel__OBAtom_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_p_double.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_p_int.java

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SWIGTYPE_p_std__dequeTint_t.java

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SWIGTYPE_p_std__ifstream.java

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SWIGTYPE_p_std__istream.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__mapTint_OpenBabel__OBAtom_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__mapTstd__string_std__string_t.java

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SWIGTYPE_p_std__multimapTdouble_unsigned_int_t.java

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SWIGTYPE_p_std__ostream.java

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SWIGTYPE_p_std__pairTint_int_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__pairTOpenBabel__OBAtom_p_OpenBabel__OBAtom_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__streampos.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__string.java

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SWIGTYPE_p_std__type_info.java

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SWIGTYPE_p_std__vectorTdouble_p_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTdouble_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTOpenBabel__OBAtom_p_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBAtom_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBBond_p_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBBond_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTOpenBabel__OBExternalBond_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBGenericData_p_t__iterator.java

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SWIGTYPE_p_std__vectorTOpenBabel__OBInternalCoord_p_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBInternalCoord_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBResidue_p_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTOpenBabel__OBRing_p_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTOpenBabel__OBRing_p_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTOpenBabel__OBTorsion_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTOpenBabel__tripleTOpenBabel__OBAtom_p_OpenBabel__OBAtom_p_double_t_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTstd__pairTint_int_t_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTstd__pairTstd__string_std__string_t_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTstd__string_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTstd__vectorTint_t_t__iterator.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTstd__vectorTOpenBabel__vector3_t_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

SWIGTYPE_p_std__vectorTstd__vectorTunsigned_int_t_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_std__vectorTunsigned_short_t.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

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SWIGTYPE_p_unsigned_int.java

Fixed Java (JNI) interfaces to compile cleanly. Updated other SWIG interfaces.

2006-12-14 23:17:34 +00:00

vector3.java

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vectorBond.java

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vectorData.java

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vectorDouble.java

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vectorInt.java

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vectorMol.java

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vectorResidue.java

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vectorRing.java

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vectorUnsignedInt.java

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vVector3.java

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vvInt.java

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README

Open Babel for Java (JNI) 0.5
--------------------

This directory contains a set of SWIG-generated interface classes for
using the Open Babel C++ library from Java. It is currently
experimental and has not been thoroughly tested.

To compile, run the following steps:

% javac *.java
# assuming that jni.h is found in /usr/include/java
% g++ -c -fpic openbabel_java.cpp -I../../include -I/usr/include/java
# assuming that libopenbabel.so is in /usr/local/lib
% g++ -shared -lopenbabel -L/usr/local/lib openbabel_java.o libopenbabel.so 

(This README needs a bit of work... hopefully some experimentation
will automate this process and give some simple java examples.