Files
openbabel/scripts/python/examples/examples.py
T
Eisuke Kawashima 6b57788a05 Improve python script
- `from __future__ import print_function`
- replace deprecated `unittest.TestCase.assertEquals` with
  `assertEqual`, `assertTrue`, or `assertFalse`
- use `obj is None` instead of `obj == None`
- remove modules and functions that are imported but not used
2019-04-17 21:59:20 +09:00

32 lines
674 B
Python

from __future__ import print_function
import openbabel
mol = openbabel.OBMol()
print('Should print 0 (atoms)')
print(mol.NumAtoms())
a = mol.NewAtom()
b = mol.NewAtom()
mol.AddBond(1, 2, 1)
print('Should print 2 (atoms)')
print(mol.NumAtoms())
print('Should print 1 (bond)')
print(mol.NumBonds())
obConversion = openbabel.OBConversion()
obConversion.SetInAndOutFormats("smi", "mdl")
mol.Clear()
obConversion.ReadString(mol, "C1=CC=CS1")
print('Should print 5 (atoms)')
print(mol.NumAtoms())
mol.AddHydrogens()
print('Should print 9 (atoms) after adding hydrogens')
print(mol.NumAtoms())
outMDL = obConversion.WriteString(mol)
obConversion.WriteFile(mol, 'temp.mdl')