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From IPA 3.0, persistent search is a preferred mechanism for new DNS zone detection and is also needed for other features (DNSSEC, SOA serial updates). Enable psearch and make sure connections attribute is right. This step is done just once for a case when user switched the persistent search back to disabled on purpose. ipa-upgradeconfig was updated to accept --debug option in case somebody would want to see debug messages.
Ground rules on adding new schema Brand new schema, particularly when written specifically for IPA, should be added in share/*.ldif. Any new files need to be explicitly loaded in ipaserver/install/dsinstance.py. These simply get copied directly into the new instance schema directory. Existing schema (e.g. in an LDAP draft) may either be added as a separate ldif in share or as an update in the updates directory. The advantage of adding the schema as an update is if 389-ds ever adds the schema then the installation won't fail due to existing schema failing to load during bootstrap. If the new schema requires a new container then this should be added to install/bootstrap-template.ldif.