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Looking at the schema in 60basev2.ldif there were many attributes that did not have an ORDERING matching rule specified correctly. There were also a number of attributeTypes that should have been just SUP distinguishedName that had a combination of SUP, SYNTAX, ORDERING, etc. This requires 389-ds-base-1.2.8.0-1+ ticket 1153
The update files are sorted before being processed because there are cases where order matters (such as getting schema added first, creating parent entries, etc). 10 - 20: Schema 20 - 30: FDS Configuration, new indices 30 - 40: Structual elements of the DIT 40 - 50: Pre-loaded data