diff --git a/CHANGES b/CHANGES
index 893827869..38d719d5c 100644
--- a/CHANGES
+++ b/CHANGES
@@ -89,6 +89,9 @@ Release 1.0 (in development)
 Release 0.6.5 (in development)
 ==============================
 
+* In autodoc, fix the omission of some module members explicitly
+  documented using documentation comments.
+
 * #345: Fix cropping of sidebar scroll bar with ``stickysidebar``
   option of the default theme.
 
diff --git a/sphinx/environment.py b/sphinx/environment.py
index dddcd4369..99cd47bbe 100644
--- a/sphinx/environment.py
+++ b/sphinx/environment.py
@@ -1592,6 +1592,8 @@ class BuildEnvironment:
         else:
             if name in self.descrefs:
                 newname = name
+            elif classname and classname + '.' + name in self.descrefs:
+                newname = classname + '.' + name
             elif modname and modname + '.' + name in self.descrefs:
                 newname = modname + '.' + name
             elif modname and classname and \
diff --git a/sphinx/ext/autodoc.py b/sphinx/ext/autodoc.py
index 1be4a7059..57cba83a8 100644
--- a/sphinx/ext/autodoc.py
+++ b/sphinx/ext/autodoc.py
@@ -594,19 +594,19 @@ class Documenter(object):
             # of inner classes can be documented
             full_mname = self.modname + '::' + \
                               '.'.join(self.objpath + [mname])
-            memberdocumenters.append(
-                classes[-1](self.directive, full_mname, self.indent))
+            documenter = classes[-1](self.directive, full_mname, self.indent)
+            memberdocumenters.append((documenter, isattr))
 
         if (self.options.member_order or self.env.config.autodoc_member_order) \
                == 'groupwise':
             # sort by group; relies on stable sort to keep items in the
             # same group sorted alphabetically
-            memberdocumenters.sort(key=lambda d: d.member_order)
+            memberdocumenters.sort(key=lambda d: d[0].member_order)
 
-        for documenter in memberdocumenters:
-            documenter.generate(all_members=True,
-                                real_modname=self.real_modname,
-                                check_module=members_check_module)
+        for documenter, isattr in memberdocumenters:
+            documenter.generate(
+                all_members=True, real_modname=self.real_modname,
+                check_module=members_check_module and not isattr)
 
         # reset current objects
         self.env.autodoc_current_module = None