diff --git a/CHANGES b/CHANGES
index 7469e42f8..c6f345323 100644
--- a/CHANGES
+++ b/CHANGES
@@ -85,9 +85,24 @@ Documentation
 Release 1.3.6 (in development)
 ==============================
 
+Features added
+--------------
+
+* #1873, #1876, #2278: Add ``page_source_suffix`` html context variable. This should be
+  introduced with :confval:`source_parsers` feature. Thanks for Eric Holscher.
+
+
 Bugs fixed
 ----------
 
+* #2265: Fix babel is used in spite of disabling it on ``latex_elements``
+* #2295: Avoid mutating dictionary errors while enumerating members in autodoc
+  with Python 3
+* #2291: Fix pdflatex "Counter too large" error from footnotes inside tables of contents
+* #2292: Fix some footnotes disappear from LaTeX output
+* #2287: ``sphinx.transforms.Locale`` always uses rst parser. Sphinx i18n feature should
+  support parsers that specified source_parsers.
+
 
 Release 1.3.5 (released Jan 24, 2016)
 =====================================
@@ -103,7 +118,8 @@ Bugs fixed
 * #2243: Ignore strange docstring types for classes, do not crash
 * #2247: Fix #2205 breaks make html for definition list with classifiers
   that contains regular-expression like string
-* #1565: Show warning if Pygments throws an ErrorToken
+* #1565: Sphinx will now emit a warning that highlighting was skipped if the syntax
+  is incorrect for `code-block`, `literalinclude` and so on.
 * #2211: Fix paragraphs in table cell doesn't work in Latex output
 * #2253: ``:pyobject:`` option of ``literalinclude`` directive can't detect indented
   body block when the block starts with blank or comment lines.
diff --git a/doc/intl.rst b/doc/intl.rst
index bd4f9e889..2290b0fde 100644
--- a/doc/intl.rst
+++ b/doc/intl.rst
@@ -106,17 +106,23 @@ This section describe a easy way to translate with sphinx-intl.
 
 #. Translate your po files under `./locale/<lang>/LC_MESSAGES/`.
 
-#. Build mo files and make translated document.
+#. make translated document.
 
    You need a :confval:`language` parameter in ``conf.py`` or you may also
    specify the parameter on the command line::
 
-      $ sphinx-intl build
       $ make -e SPHINXOPTS="-D language='de'" html
 
 Congratulations! You got the translated documentation in the ``_build/html``
 directory.
 
+.. versionadded:: 1.3
+
+   sphinx-build that is invoked by make command will build po files into mo files.
+
+   If you are using 1.2.x or earlier, please invoke ``sphinx-intl build`` command
+   before make command.
+
 
 Translating
 ^^^^^^^^^^^
@@ -251,9 +257,8 @@ easy to fetch and push translations.
       ...
       Done.
 
-   Build po files into mo and make html::
+   Invoke make html::
 
-      $ sphinx-intl build
       $ make -e SPHINXOPTS="-D language='de'" html
 
 
diff --git a/sphinx/application.py b/sphinx/application.py
index b88fb311c..7f4aaa1bb 100644
--- a/sphinx/application.py
+++ b/sphinx/application.py
@@ -35,7 +35,8 @@ from sphinx.errors import SphinxError, SphinxWarning, ExtensionError, \
 from sphinx.domains import ObjType, BUILTIN_DOMAINS
 from sphinx.domains.std import GenericObject, Target, StandardDomain
 from sphinx.builders import BUILTIN_BUILDERS
-from sphinx.environment import BuildEnvironment, SphinxStandaloneReader
+from sphinx.environment import BuildEnvironment
+from sphinx.io import SphinxStandaloneReader
 from sphinx.util import pycompat  # noqa: imported for side-effects
 from sphinx.util import import_object
 from sphinx.util.tags import Tags
diff --git a/sphinx/environment.py b/sphinx/environment.py
index ad07b642a..13822a755 100644
--- a/sphinx/environment.py
+++ b/sphinx/environment.py
@@ -23,24 +23,23 @@ from os import path
 from glob import glob
 from itertools import groupby
 
-from six import iteritems, itervalues, text_type, class_types, string_types, next
+from six import iteritems, itervalues, text_type, class_types, next
 from six.moves import cPickle as pickle
 from docutils import nodes
-from docutils.io import FileInput, NullOutput
+from docutils.io import NullOutput
 from docutils.core import Publisher
 from docutils.utils import Reporter, relative_path, get_source_line
-from docutils.readers import standalone
 from docutils.parsers.rst import roles, directives
 from docutils.parsers.rst.languages import en as english
 from docutils.parsers.rst.directives.html import MetaBody
-from docutils.writers import UnfilteredWriter
 from docutils.frontend import OptionParser
 
 from sphinx import addnodes
+from sphinx.io import SphinxStandaloneReader, SphinxDummyWriter, SphinxFileInput
 from sphinx.util import url_re, get_matching_docs, docname_join, split_into, \
-    FilenameUniqDict, get_figtype, import_object, split_index_msg, split_docinfo
+    FilenameUniqDict, get_figtype, import_object, split_index_msg
 from sphinx.util.nodes import clean_astext, make_refnode, WarningStream, is_translatable
-from sphinx.util.osutil import SEP, getcwd, fs_encoding
+from sphinx.util.osutil import SEP, getcwd, fs_encoding, ensuredir
 from sphinx.util.i18n import find_catalog_files
 from sphinx.util.console import bold, purple
 from sphinx.util.matching import compile_matchers
@@ -49,12 +48,7 @@ from sphinx.util.websupport import is_commentable
 from sphinx.errors import SphinxError, ExtensionError
 from sphinx.locale import _
 from sphinx.versioning import add_uids, merge_doctrees
-from sphinx.transforms import (
-    DefaultSubstitutions, MoveModuleTargets, ApplySourceWorkaround,
-    HandleCodeBlocks, AutoNumbering, SortIds, CitationReferences, Locale,
-    RemoveTranslatableInline, SphinxContentsFilter, ExtraTranslatableNodes,
-)
-
+from sphinx.transforms import SphinxContentsFilter
 
 orig_role_function = roles.role
 orig_directive_function = directives.directive
@@ -97,77 +91,6 @@ class NoUri(Exception):
     pass
 
 
-class SphinxStandaloneReader(standalone.Reader):
-    """
-    Add our own transforms.
-    """
-    transforms = [ApplySourceWorkaround, ExtraTranslatableNodes, Locale, CitationReferences,
-                  DefaultSubstitutions, MoveModuleTargets, HandleCodeBlocks,
-                  AutoNumbering, SortIds, RemoveTranslatableInline]
-
-    def __init__(self, app, parsers={}, *args, **kwargs):
-        standalone.Reader.__init__(self, *args, **kwargs)
-        self.parser_map = {}
-        for suffix, parser_class in parsers.items():
-            if isinstance(parser_class, string_types):
-                parser_class = import_object(parser_class, 'source parser')
-            parser = parser_class()
-            if hasattr(parser, 'set_application'):
-                parser.set_application(app)
-            self.parser_map[suffix] = parser
-
-    def read(self, source, parser, settings):
-        self.source = source
-
-        for suffix in self.parser_map:
-            if source.source_path.endswith(suffix):
-                self.parser = self.parser_map[suffix]
-                break
-
-        if not self.parser:
-            self.parser = parser
-        self.settings = settings
-        self.input = self.source.read()
-        self.parse()
-        return self.document
-
-    def get_transforms(self):
-        return standalone.Reader.get_transforms(self) + self.transforms
-
-
-class SphinxDummyWriter(UnfilteredWriter):
-    supported = ('html',)  # needed to keep "meta" nodes
-
-    def translate(self):
-        pass
-
-
-class SphinxFileInput(FileInput):
-    def __init__(self, app, env, *args, **kwds):
-        self.app = app
-        self.env = env
-        kwds['error_handler'] = 'sphinx'  # py3: handle error on open.
-        FileInput.__init__(self, *args, **kwds)
-
-    def decode(self, data):
-        if isinstance(data, text_type):  # py3: `data` already decoded.
-            return data
-        return data.decode(self.encoding, 'sphinx')  # py2: decoding
-
-    def read(self):
-        data = FileInput.read(self)
-        if self.app:
-            arg = [data]
-            self.app.emit('source-read', self.env.docname, arg)
-            data = arg[0]
-        docinfo, data = split_docinfo(data)
-        if self.env.config.rst_epilog:
-            data = data + '\n' + self.env.config.rst_epilog + '\n'
-        if self.env.config.rst_prolog:
-            data = self.env.config.rst_prolog + '\n' + data
-        return docinfo + data
-
-
 class BuildEnvironment:
     """
     The environment in which the ReST files are translated.
@@ -859,9 +782,7 @@ class BuildEnvironment:
         # save the parsed doctree
         doctree_filename = self.doc2path(docname, self.doctreedir,
                                          '.doctree')
-        dirname = path.dirname(doctree_filename)
-        if not path.isdir(dirname):
-            os.makedirs(dirname)
+        ensuredir(path.dirname(doctree_filename))
         f = open(doctree_filename, 'wb')
         try:
             pickle.dump(doctree, f, pickle.HIGHEST_PROTOCOL)
diff --git a/sphinx/io.py b/sphinx/io.py
new file mode 100644
index 000000000..301a0da31
--- /dev/null
+++ b/sphinx/io.py
@@ -0,0 +1,125 @@
+# -*- coding: utf-8 -*-
+"""
+    sphinx.io
+    ~~~~~~~~~
+
+    Input/Output files
+
+    :copyright: Copyright 2007-2016 by the Sphinx team, see AUTHORS.
+    :license: BSD, see LICENSE for details.
+"""
+from docutils.io import FileInput
+from docutils.readers import standalone
+from docutils.writers import UnfilteredWriter
+from six import string_types, text_type
+
+from sphinx.transforms import ApplySourceWorkaround, ExtraTranslatableNodes, Locale, \
+    CitationReferences, DefaultSubstitutions, MoveModuleTargets, HandleCodeBlocks, \
+    AutoNumbering, SortIds, RemoveTranslatableInline
+from sphinx.util import import_object, split_docinfo
+
+
+class SphinxBaseReader(standalone.Reader):
+    """
+    Add our source parsers
+    """
+    def __init__(self, app, parsers={}, *args, **kwargs):
+        standalone.Reader.__init__(self, *args, **kwargs)
+        self.parser_map = {}
+        for suffix, parser_class in parsers.items():
+            if isinstance(parser_class, string_types):
+                parser_class = import_object(parser_class, 'source parser')
+            parser = parser_class()
+            if hasattr(parser, 'set_application'):
+                parser.set_application(app)
+            self.parser_map[suffix] = parser
+
+    def read(self, source, parser, settings):
+        self.source = source
+
+        for suffix in self.parser_map:
+            if source.source_path.endswith(suffix):
+                self.parser = self.parser_map[suffix]
+                break
+
+        if not self.parser:
+            self.parser = parser
+        self.settings = settings
+        self.input = self.source.read()
+        self.parse()
+        return self.document
+
+    def get_transforms(self):
+        return standalone.Reader.get_transforms(self) + self.transforms
+
+
+class SphinxStandaloneReader(SphinxBaseReader):
+    """
+    Add our own transforms.
+    """
+    transforms = [ApplySourceWorkaround, ExtraTranslatableNodes, Locale, CitationReferences,
+                  DefaultSubstitutions, MoveModuleTargets, HandleCodeBlocks,
+                  AutoNumbering, SortIds, RemoveTranslatableInline]
+
+
+class SphinxI18nReader(SphinxBaseReader):
+    """
+    Replacer for document.reporter.get_source_and_line method.
+
+    reST text lines for translation do not have the original source line number.
+    This class provides the correct line numbers when reporting.
+    """
+
+    transforms = [ApplySourceWorkaround, ExtraTranslatableNodes, CitationReferences,
+                  DefaultSubstitutions, MoveModuleTargets, HandleCodeBlocks,
+                  AutoNumbering, SortIds, RemoveTranslatableInline]
+
+    def __init__(self, *args, **kwargs):
+        SphinxBaseReader.__init__(self, *args, **kwargs)
+        self.lineno = None
+
+    def set_lineno_for_reporter(self, lineno):
+        self.lineno = lineno
+
+    def new_document(self):
+        document = SphinxBaseReader.new_document(self)
+        reporter = document.reporter
+
+        def get_source_and_line(lineno=None):
+            return reporter.source, self.lineno
+
+        reporter.get_source_and_line = get_source_and_line
+        return document
+
+
+class SphinxDummyWriter(UnfilteredWriter):
+    supported = ('html',)  # needed to keep "meta" nodes
+
+    def translate(self):
+        pass
+
+
+class SphinxFileInput(FileInput):
+    def __init__(self, app, env, *args, **kwds):
+        self.app = app
+        self.env = env
+        kwds['error_handler'] = 'sphinx'  # py3: handle error on open.
+        FileInput.__init__(self, *args, **kwds)
+
+    def decode(self, data):
+        if isinstance(data, text_type):  # py3: `data` already decoded.
+            return data
+        return data.decode(self.encoding, 'sphinx')  # py2: decoding
+
+    def read(self):
+        data = FileInput.read(self)
+        if self.app:
+            arg = [data]
+            self.app.emit('source-read', self.env.docname, arg)
+            data = arg[0]
+        docinfo, data = split_docinfo(data)
+        if self.env.config.rst_epilog:
+            data = data + '\n' + self.env.config.rst_epilog + '\n'
+        if self.env.config.rst_prolog:
+            data = self.env.config.rst_prolog + '\n' + data
+        return docinfo + data
diff --git a/sphinx/quickstart.py b/sphinx/quickstart.py
index 7d7271824..e3f226e19 100644
--- a/sphinx/quickstart.py
+++ b/sphinx/quickstart.py
@@ -9,6 +9,7 @@
     :license: BSD, see LICENSE for details.
 """
 from __future__ import print_function
+from __future__ import absolute_import
 
 import re
 import os
diff --git a/sphinx/transforms.py b/sphinx/transforms.py
index 4619449e7..f8b0bf984 100644
--- a/sphinx/transforms.py
+++ b/sphinx/transforms.py
@@ -12,8 +12,8 @@
 from os import path
 
 from docutils import nodes
-from docutils.utils import new_document, relative_path
-from docutils.parsers.rst import Parser as RSTParser
+from docutils.io import StringInput
+from docutils.utils import relative_path
 from docutils.transforms import Transform
 from docutils.transforms.parts import ContentsFilter
 
@@ -202,21 +202,35 @@ class ExtraTranslatableNodes(Transform):
             node['translatable'] = True
 
 
-class CustomLocaleReporter(object):
+def publish_msgstr(app, source, source_path, source_line, config, settings):
+    """Publish msgstr (single line) into docutils document
+
+    :param sphinx.application.Sphinx app: sphinx application
+    :param unicode source: source text
+    :param unicode source_path: source path for warning indication
+    :param source_line: source line for warning indication
+    :param sphinx.config.Config config: sphinx config
+    :param docutils.frontend.Values settings: docutils settings
+    :return: document
+    :rtype: docutils.nodes.document
     """
-    Replacer for document.reporter.get_source_and_line method.
-
-    reST text lines for translation do not have the original source line number.
-    This class provides the correct line numbers when reporting.
-    """
-    def __init__(self, source, line):
-        self.source, self.line = source, line
-
-    def set_reporter(self, document):
-        document.reporter.get_source_and_line = self.get_source_and_line
-
-    def get_source_and_line(self, lineno=None):
-        return self.source, self.line
+    from sphinx.io import SphinxI18nReader
+    reader = SphinxI18nReader(
+        app=app,
+        parsers=config.source_parsers,
+        parser_name='restructuredtext',  # default parser
+    )
+    reader.set_lineno_for_reporter(source_line)
+    doc = reader.read(
+        source=StringInput(source=source, source_path=source_path),
+        parser=reader.parser,
+        settings=settings,
+    )
+    try:
+        doc = doc[0]
+    except IndexError:  # empty node
+        pass
+    return doc
 
 
 class Locale(Transform):
@@ -244,8 +258,6 @@ class Locale(Transform):
         if not has_catalog:
             return
 
-        parser = RSTParser()
-
         # phase1: replace reference ids with translated names
         for node, msg in extract_messages(self.document):
             msgstr = catalog.gettext(msg)
@@ -267,13 +279,8 @@ class Locale(Transform):
             if isinstance(node, LITERAL_TYPE_NODES):
                 msgstr = '::\n\n' + indent(msgstr, ' '*3)
 
-            patch = new_document(source, settings)
-            CustomLocaleReporter(node.source, node.line).set_reporter(patch)
-            parser.parse(msgstr, patch)
-            try:
-                patch = patch[0]
-            except IndexError:  # empty node
-                pass
+            patch = publish_msgstr(
+                env.app, msgstr, source, node.line, env.config, settings)
             # XXX doctest and other block markup
             if not isinstance(patch, nodes.paragraph):
                 continue  # skip for now
@@ -390,13 +397,8 @@ class Locale(Transform):
             if isinstance(node, LITERAL_TYPE_NODES):
                 msgstr = '::\n\n' + indent(msgstr, ' '*3)
 
-            patch = new_document(source, settings)
-            CustomLocaleReporter(node.source, node.line).set_reporter(patch)
-            parser.parse(msgstr, patch)
-            try:
-                patch = patch[0]
-            except IndexError:  # empty node
-                pass
+            patch = publish_msgstr(
+                env.app, msgstr, source, node.line, env.config, settings)
             # XXX doctest and other block markup
             if not isinstance(
                     patch,
diff --git a/sphinx/util/nodes.py b/sphinx/util/nodes.py
index f8d2d0a93..ccea95777 100644
--- a/sphinx/util/nodes.py
+++ b/sphinx/util/nodes.py
@@ -141,9 +141,10 @@ def find_source_node(node):
             return pnode.source
 
 
-def traverse_parent(node):
+def traverse_parent(node, cls=None):
     while node:
-        yield node
+        if cls is None or isinstance(node, cls):
+            yield node
         node = node.parent
 
 
diff --git a/sphinx/writers/latex.py b/sphinx/writers/latex.py
index 6676bfc65..3510c6358 100644
--- a/sphinx/writers/latex.py
+++ b/sphinx/writers/latex.py
@@ -25,7 +25,7 @@ from sphinx import highlighting
 from sphinx.errors import SphinxError
 from sphinx.locale import admonitionlabels, _
 from sphinx.util import split_into
-from sphinx.util.nodes import clean_astext
+from sphinx.util.nodes import clean_astext, traverse_parent
 from sphinx.util.osutil import ustrftime
 from sphinx.util.texescape import tex_escape_map, tex_replace_map
 from sphinx.util.smartypants import educate_quotes_latex
@@ -174,11 +174,15 @@ class ShowUrlsTransform(object):
                 if node.astext() != uri:
                     index = node.parent.index(node)
                     if show_urls == 'footnote':
-                        footnote_nodes = self.create_footnote(uri)
-                        for i, fn in enumerate(footnote_nodes):
-                            node.parent.insert(index + i + 1, fn)
+                        if list(traverse_parent(node, nodes.topic)):
+                            # should not expand references in topics
+                            pass
+                        else:
+                            footnote_nodes = self.create_footnote(uri)
+                            for i, fn in enumerate(footnote_nodes):
+                                node.parent.insert(index + i + 1, fn)
 
-                        self.expanded = True
+                            self.expanded = True
                     else:  # all other true values (b/w compat)
                         textnode = nodes.Text(" (%s)" % uri)
                         node.parent.insert(index + 1, textnode)
@@ -210,9 +214,14 @@ class ShowUrlsTransform(object):
         def is_auto_footnote(node):
             return isinstance(node, nodes.footnote) and node.get('auto')
 
-        def footnote_ref_by(ids):
+        def footnote_ref_by(node):
+            ids = node['ids']
+            parent = list(traverse_parent(node, (nodes.document, addnodes.start_of_file)))[0]
+
             def is_footnote_ref(node):
-                return isinstance(node, nodes.footnote_reference) and ids[0] == node['refid']
+                return (isinstance(node, nodes.footnote_reference) and
+                        ids[0] == node['refid'] and
+                        parent in list(traverse_parent(node)))
 
             return is_footnote_ref
 
@@ -231,7 +240,7 @@ class ShowUrlsTransform(object):
                 footnote['names'].remove(old_label)
             footnote['names'].append(label)
 
-            for footnote_ref in self.document.traverse(footnote_ref_by(footnote['ids'])):
+            for footnote_ref in self.document.traverse(footnote_ref_by(footnote)):
                 footnote_ref.remove(footnote_ref[0])
                 footnote_ref += nodes.Text(label)
 
@@ -378,12 +387,6 @@ class LaTeXTranslator(nodes.NodeVisitor):
                     return '\\usepackage{%s}' % (packagename,)
             usepackages = (declare_package(*p) for p in builder.usepackages)
             self.elements['usepackages'] += "\n".join(usepackages)
-        if getattr(document.settings, 'contentsname', None):
-            self.elements['contentsname'] = \
-                self.babel_renewcommand('\\contentsname', document.settings.contentsname)
-        self.elements['pageautorefname'] = \
-            self.babel_defmacro('\\pageautorefname', self.encode(_('page')))
-        self.elements['numfig_format'] = self.generate_numfig_format(builder)
         # allow the user to override them all
         self.elements.update(builder.config.latex_elements)
         if self.elements['extraclassoptions']:
@@ -396,6 +399,12 @@ class LaTeXTranslator(nodes.NodeVisitor):
             else:
                 self.elements['tocdepth'] = ('\\setcounter{tocdepth}{%d}' %
                                              (document['tocdepth'] - 1))
+        if getattr(document.settings, 'contentsname', None):
+            self.elements['contentsname'] = \
+                self.babel_renewcommand('\\contentsname', document.settings.contentsname)
+        self.elements['pageautorefname'] = \
+            self.babel_defmacro('\\pageautorefname', self.encode(_('page')))
+        self.elements['numfig_format'] = self.generate_numfig_format(builder)
 
         self.highlighter = highlighting.PygmentsBridge(
             'latex',
diff --git a/tests/roots/test-footnotes/bar.rst b/tests/roots/test-footnotes/bar.rst
new file mode 100644
index 000000000..660c66306
--- /dev/null
+++ b/tests/roots/test-footnotes/bar.rst
@@ -0,0 +1,6 @@
+bar
+===
+
+Same footnote number [1]_ in bar.rst
+
+.. [1] footnote in bar
diff --git a/tests/roots/test-footnotes/baz.rst b/tests/roots/test-footnotes/baz.rst
new file mode 100644
index 000000000..af496c5f6
--- /dev/null
+++ b/tests/roots/test-footnotes/baz.rst
@@ -0,0 +1,6 @@
+baz
+===
+
+Auto footnote number [#]_ in baz.rst
+
+.. [#] footnote in baz
diff --git a/tests/roots/test-footnotes/index.rst b/tests/roots/test-footnotes/index.rst
index a20052037..3a8bc25c5 100644
--- a/tests/roots/test-footnotes/index.rst
+++ b/tests/roots/test-footnotes/index.rst
@@ -2,6 +2,14 @@
 test-footenotes
 ===============
 
+.. toctree::
+
+   bar
+   baz
+
+.. contents::
+   :local:
+
 The section with a reference to [AuthorYear]_
 =============================================
 
diff --git a/tests/test_build_latex.py b/tests/test_build_latex.py
index 38dc665c2..d7d208c58 100644
--- a/tests/test_build_latex.py
+++ b/tests/test_build_latex.py
@@ -264,6 +264,25 @@ def test_numref_with_language_ja(app, status, warning):
     assert '\\hyperref[baz:code22]{Code-\\ref{baz:code22}}' in result
 
 
+@with_app(buildername='latex', testroot='numfig',
+          confoverrides={'numfig': True, 'language': 'ru', 'latex_elements': {'babel': ''}})
+def test_numref_on_bable_disabled(app, status, warning):
+    app.builder.build_all()
+    result = (app.outdir / 'Python.tex').text(encoding='utf8')
+    print(result)
+    print(status.getvalue())
+    print(warning.getvalue())
+    assert '\\renewcommand{\\figurename}{Fig. }' in result
+    assert '\\renewcommand{\\tablename}{Table }' in result
+    assert '\\SetupFloatingEnvironment{literal-block}{name=Listing }' in result
+    assert '\\hyperref[index:fig1]{Fig. \\ref{index:fig1}}' in result
+    assert '\\hyperref[baz:fig22]{Figure\\ref{baz:fig22}}' in result
+    assert '\\hyperref[index:table-1]{Table \\ref{index:table-1}}' in result
+    assert '\\hyperref[baz:table22]{Table:\\ref{baz:table22}}' in result
+    assert '\\hyperref[index:code-1]{Listing \\ref{index:code-1}}' in result
+    assert '\\hyperref[baz:code22]{Code-\\ref{baz:code22}}' in result
+
+
 @with_app(buildername='latex')
 def test_latex_add_latex_package(app, status, warning):
     app.add_latex_package('foo')
@@ -423,6 +442,15 @@ def test_latex_show_urls_is_inline(app, status, warning):
     print(result)
     print(status.getvalue())
     print(warning.getvalue())
+    assert 'Same footnote number \\footnote[1]{\nfootnote in bar\n} in bar.rst' in result
+    assert 'Auto footnote number \\footnote[1]{\nfootnote in baz\n} in baz.rst' in result
+    assert ('\\phantomsection\\label{index:id26}{\\hyperref[index:the\\string-section'
+            '\\string-with\\string-a\\string-reference\\string-to\\string-authoryear]'
+            '{\\emph{The section with a reference to \\phantomsection\\label{index:id1}'
+            '{\\hyperref[index:authoryear]{\\emph{{[}AuthorYear{]}}}}}}}' in result)
+    assert ('\\phantomsection\\label{index:id27}{\\hyperref[index:the\\string-section'
+            '\\string-with\\string-a\\string-reference\\string-to]{\\emph{The section '
+            'with a reference to }}}' in result)
     assert 'First footnote: \\footnote[2]{\nFirst\n}' in result
     assert 'Second footnote: \\footnote[1]{\nSecond\n}' in result
     assert '\\href{http://sphinx-doc.org/}{Sphinx} (http://sphinx-doc.org/)' in result
@@ -449,20 +477,29 @@ def test_latex_show_urls_is_footnote(app, status, warning):
     print(result)
     print(status.getvalue())
     print(warning.getvalue())
-    assert 'First footnote: \\footnote[2]{\nFirst\n}' in result
+    assert 'Same footnote number \\footnote[1]{\nfootnote in bar\n} in bar.rst' in result
+    assert 'Auto footnote number \\footnote[2]{\nfootnote in baz\n} in baz.rst' in result
+    assert ('\\phantomsection\\label{index:id26}{\\hyperref[index:the\\string-section'
+            '\\string-with\\string-a\\string-reference\\string-to\\string-authoryear]'
+            '{\\emph{The section with a reference to \\phantomsection\\label{index:id1}'
+            '{\\hyperref[index:authoryear]{\\emph{{[}AuthorYear{]}}}}}}}' in result)
+    assert ('\\phantomsection\\label{index:id27}{\\hyperref[index:the\\string-section'
+            '\\string-with\\string-a\\string-reference\\string-to]{\\emph{The section '
+            'with a reference to }}}' in result)
+    assert 'First footnote: \\footnote[3]{\nFirst\n}' in result
     assert 'Second footnote: \\footnote[1]{\nSecond\n}' in result
     assert ('\\href{http://sphinx-doc.org/}{Sphinx}'
-            '\\footnote[3]{\nhttp://sphinx-doc.org/\n}' in result)
-    assert 'Third footnote: \\footnote[5]{\nThird\n}' in result
+            '\\footnote[4]{\nhttp://sphinx-doc.org/\n}' in result)
+    assert 'Third footnote: \\footnote[6]{\nThird\n}' in result
     assert ('\\href{http://sphinx-doc.org/~test/}{URL including tilde}'
-            '\\footnote[4]{\nhttp://sphinx-doc.org/\\textasciitilde{}test/\n}' in result)
-    assert ('\\item[{\\href{http://sphinx-doc.org/}{URL in term}\\protect\\footnotemark[7]}] '
-            '\\leavevmode\\footnotetext[7]{\nhttp://sphinx-doc.org/\n}\nDescription' in result)
-    assert ('\\item[{Footnote in term \\protect\\footnotemark[9]}] '
-            '\\leavevmode\\footnotetext[9]{\nFootnote in term\n}\nDescription' in result)
-    assert ('\\item[{\\href{http://sphinx-doc.org/}{Term in deflist}\\protect'
-            '\\footnotemark[8]}] '
+            '\\footnote[5]{\nhttp://sphinx-doc.org/\\textasciitilde{}test/\n}' in result)
+    assert ('\\item[{\\href{http://sphinx-doc.org/}{URL in term}\\protect\\footnotemark[8]}] '
             '\\leavevmode\\footnotetext[8]{\nhttp://sphinx-doc.org/\n}\nDescription' in result)
+    assert ('\\item[{Footnote in term \\protect\\footnotemark[10]}] '
+            '\\leavevmode\\footnotetext[10]{\nFootnote in term\n}\nDescription' in result)
+    assert ('\\item[{\\href{http://sphinx-doc.org/}{Term in deflist}\\protect'
+            '\\footnotemark[9]}] '
+            '\\leavevmode\\footnotetext[9]{\nhttp://sphinx-doc.org/\n}\nDescription' in result)
     assert ('\\href{https://github.com/sphinx-doc/sphinx}'
             '{https://github.com/sphinx-doc/sphinx}\n' in result)
     assert ('\\href{mailto:sphinx-dev@googlegroups.com}'
@@ -477,6 +514,15 @@ def test_latex_show_urls_is_no(app, status, warning):
     print(result)
     print(status.getvalue())
     print(warning.getvalue())
+    assert 'Same footnote number \\footnote[1]{\nfootnote in bar\n} in bar.rst' in result
+    assert 'Auto footnote number \\footnote[1]{\nfootnote in baz\n} in baz.rst' in result
+    assert ('\\phantomsection\\label{index:id26}{\\hyperref[index:the\\string-section'
+            '\\string-with\\string-a\\string-reference\\string-to\\string-authoryear]'
+            '{\\emph{The section with a reference to \\phantomsection\\label{index:id1}'
+            '{\\hyperref[index:authoryear]{\\emph{{[}AuthorYear{]}}}}}}}' in result)
+    assert ('\\phantomsection\\label{index:id27}{\\hyperref[index:the\\string-section'
+            '\\string-with\\string-a\\string-reference\\string-to]{\\emph{The section '
+            'with a reference to }}}' in result)
     assert 'First footnote: \\footnote[2]{\nFirst\n}' in result
     assert 'Second footnote: \\footnote[1]{\nSecond\n}' in result
     assert '\\href{http://sphinx-doc.org/}{Sphinx}' in result