82 lines
3.9 KiB
Python
82 lines
3.9 KiB
Python
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#!/usr/bin/env python
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import sys
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import os
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import numpy as np
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#import matplotlib.pyplot as plt
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from glob import glob
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#from netCDF4 import Dataset
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from LBPM_WIA_OutputData_Postprocessing_utils import *
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# Check if there is a proper command line argument
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if len(sys.argv) !=2:
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sys.stderr.write('**Error: Usage: ' + sys.argv[0] + ' <Domain.in>\n')
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sys.exit()
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# end if
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# Read 'Domain.in' --------------------------------------------------------------------------
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f = open(sys.argv[1],'r')
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lines = f.readlines()
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# Read processors configuration
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nproc_x,nproc_y,nproc_z=np.fromstring(lines[0].splitlines()[0],dtype = np.int32,sep=' ')
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# Read subdomain dimensions
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lx,ly,lz = np.fromstring(lines[1].splitlines()[0],dtype = np.int32,sep=' ')
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# Read domain dimensions
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LX,LY,LZ = np.fromstring(lines[3].splitlines()[0],dtype = np.float32,sep=' ')
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LX=int(LX)
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LY=int(LY)
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LZ=int(LZ)
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f.close()
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# NOTE: Do not forget the halo layer attached on each subdomain !
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lx = lx + 2
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ly = ly + 2
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lz = lz + 2
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# -------------------------------------------------------------------------------------------
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print "**Info: Reconstructing individual data sets according to the processor grid..."
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dataOUT = Reconstruct_SignDist_data('DenNW.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('DenW.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f0.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f1.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f2.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f3.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f4.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f5.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f6.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f7.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f8.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f9.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f10.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f11.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f12.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f13.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f14.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f15.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f16.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f17.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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dataOUT = np.hstack((dataOUT,Reconstruct_SignDist_data('f18.0*',(nproc_x,nproc_y,nproc_z),(lx,ly,lz))))
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#output_data_name_bin='Output_data.bin'
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output_data_name_nc ='Restart_dbg_TimeStep_.nc'
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# Write to binary file
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#output_data.tofile(output_data_name_bin)
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#print '**Info: Output data \''+output_data_name_bin+'\' is written.'
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# Write to *nc file
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Writer_NetCDF_multiVar_Restart_LBPMWIA(output_data_name_nc,dataOUT.astype(np.float32),LX,LY,LZ)
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# Clean up temporary files
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files=glob('Den*')
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for file_tmp in files:
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print "**Warning: Remove file: "+file_tmp
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os.remove(file_tmp)
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#end for
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files=glob('f*.0*')
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for file_tmp in files:
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print "**Warning: Remove file: "+file_tmp
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os.remove(file_tmp)
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#end for
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