35 lines
856 B
Plaintext
35 lines
856 B
Plaintext
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#!/bin/bash
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#SBATCH -p normal_q
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#SBATCH -N 1
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#SBATCH -n 20
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#SBATCH -t 0:30:00
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#SBATCH --exclusive
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#SBATCH --gres=gpu:4
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#SBATCH --account=slurmtest
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echo "LBPM on huckleberry"
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module load gcc/7.3.0 openmpi/3.1.2 cuda
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module load szip
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module load zlib
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module list
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module load hdf5/1.8.12
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module load silo
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#module load lbpm
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export LBPM_BIN=$HOME/install/huckleberry/LBPM/bin
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export CUDA_VISIBLE_DEVICES=0,1,2,3
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export OMPI_MCA_btl_smcuda_use_cuda_ipc=0
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export OMPI_MCA_pml=ob1
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export OMPI_MCA_mpi_warn_on_fork=0
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#srun --exclusive -n 4 --cpu-bind=v,map_cpu=0,40,80,120 --accel-bind=g --gres=gpu:4 $LBPM_BIN/lbpm_color_simulator input.db
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#
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#
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mpirun -np 1 $LBPM_BIN/lbpm_serial_decomp input.db
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mpirun --oversubscribe --npernode 8 -mca pml ob1 -mca btl_smcuda_use_cuda_ipc 0 --bind-to core:overload-allowed $LBPM_BIN/lbpm_morphdrain_pp input.db
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exit;
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