Updating CMake files to remove option for visit plugin and force C++14 or newer
This commit is contained in:
Mark Berrill
parent
3c55966984
commit
078464151a
@ -28,11 +28,13 @@ ENDIF()
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SET( CMAKE_CXX_EXTENSIONS OFF )
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SET( CMAKE_CXX_EXTENSIONS OFF )
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IF ( NOT CMAKE_CXX_STANDARD )
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IF ( NOT CMAKE_CXX_STANDARD )
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IF ( CXX_STD )
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IF ( CXX_STD )
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MESSAGE( WARNING "CXX_STD is obsolete, please set CMAKE_CXX_STANDARD" )
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MESSAGE( FATAL_ERROR "CXX_STD is obsolete, please set CMAKE_CXX_STANDARD" )
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SET( CMAKE_CXX_STANDARD ${CXX_STD} )
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ENDIF()
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ENDIF()
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SET( CMAKE_CXX_STANDARD 14 )
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SET( CMAKE_CXX_STANDARD 14 )
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ENDIF()
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ENDIF()
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IF ( ( "${CMAKE_CXX_STANDARD}" GREATER "90" ) OR ( "${CMAKE_CXX_STANDARD}" LESS "14" ) )
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MESSAGE( FATAL_ERROR "C++14 or newer required" )
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ENDIF()
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# Set source/install paths
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# Set source/install paths
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@ -110,7 +112,7 @@ ENDIF()
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ADD_CUSTOM_TARGET( build-test )
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ADD_CUSTOM_TARGET( build-test )
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ADD_CUSTOM_TARGET( build-examples )
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ADD_CUSTOM_TARGET( build-examples )
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ADD_CUSTOM_TARGET( check COMMAND make test )
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ADD_CUSTOM_TARGET( check COMMAND make test )
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ADD_DISTCLEAN( analysis null_timer tests liblbpm-wia.* cpu gpu example common visit IO threadpool )
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ADD_DISTCLEAN( analysis null_timer tests liblbpm-wia.* cpu gpu example common IO threadpool )
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# Check for CUDA
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# Check for CUDA
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@ -168,11 +170,3 @@ IF ( NOT ONLY_BUILD_DOCS )
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INSTALL_PROJ_LIB()
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INSTALL_PROJ_LIB()
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ENDIF()
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ENDIF()
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# Create the visit plugin
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IF ( USE_VISIT )
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INCLUDE( ${CMAKE_CURRENT_SOURCE_DIR}/cmake/FindVisIt.cmake )
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VISIT_PLUGIN( visit LBM )
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ENDIF()
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@ -8,8 +8,8 @@ Lattice Boltzmann Methods for Porous Media
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Notes on installation
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Notes on installation
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* example configure scripts for cmake are in the sample_scripts directory
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* example configure scripts for cmake are in the sample_scripts directory
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* required dependencies - MPI, HDF5, SILO, C++11
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* required dependencies - MPI, HDF5, SILO, C++14
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* optional dependencies - NetCDF, CUDA, TimerUtility, VisIT
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* optional dependencies - NetCDF, CUDA, TimerUtility
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Build dependencies (zlib, hdf5, silo) OR point to an existing installation
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Build dependencies (zlib, hdf5, silo) OR point to an existing installation
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64
README.visit
64
README.visit
@ -1,64 +0,0 @@
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To compile the visit plug-in and run in parallel on computational back-end:
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Checkout code and create a cmake script to compile plug-in.
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Example commands for Rhea:
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Load the proper modules
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module unload intel gcc
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module load gcc/4.8.2
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module load cmake
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Configure cmake to build the plug-in
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cmake \
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-D CMAKE_BUILD_TYPE:STRING=Release \
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-D CMAKE_C_COMPILER:PATH=gcc \
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-D CMAKE_CXX_COMPILER:PATH=g++ \
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-D USE_MPI=false \
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-D USE_CUDA=false \
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-D USE_VISIT=true \
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-D VISIT_ROOT_DIR=/sw/redhat6/visit \
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-D USE_TIMER=false \
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../../LBPM-WIA
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Build the visit plug-in
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make install -j 8
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make visit
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Check that the visit plug-in installed in ~/.visit/2.9.0/linux-x86_64/plugins/databases
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where 2.9.0 is the current version of visit on rhea
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It should have created several shared libraries:
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libELBMDatabase_par.so libELBMDatabase_ser.so libILBMDatabase.so libMLBMDatabase.so
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Install visit on local machine (2.9.0)
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Start visit on local machine
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First time:
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Go to: Options - Host profiles
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Click Remote Profiles - Update
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After list populates, drag host_ornl_rhea.xml to Hosts
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Select ORNL_Rhea from Hosts, click on Machines
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Set account username
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Click on Launch Profiles tab
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Change profile name and timeout if desired
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Click on Parallel tab
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Add Default Bank / Account with project number, set default nodes/processors if desired
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Click Apply, then close window
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Go to: Options - Save Settings
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Open remote file / launch parallel job
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Click Open file
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Change Host to ORNL_Rhea, enter passcode when prompted
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Open visualization file
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/lustre/atlas/proj-shared/geo106/vis_test/dumps.LBM
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New window will open prompting for # of nodes, processors, Bank (project number) and time limit
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Rhea as 16 physical-cores/node and 64 GB/node
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for example file above I used 1 node, 16 cores
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Visit will call qsub and submit a parallel job that will start when ready
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Visualize desired quantities
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@ -1,61 +0,0 @@
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# Tool for building visit plugins
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#
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# The script will prompt the user to specify VISIT_ROOT_DIR if the prefix
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# cannot be determined by the location of xml2cmake in the system path.
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# Users can set the environment variable VISIT_BIN_PATH before running cmake
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# (e.g. VISIT_BIN_PATH=/usr/local/bin instead of VISIT_ROOT_DIR)
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# Find the xml2cmake executable and set VISIT_XML_CMAKE
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SET( VISIT_XML_CMAKE )
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FIND_PROGRAM( VISIT_XML_CMAKE
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NAMES xml2cmake
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PATHS
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"${VISIT_ROOT_DIR}"
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"${VISIT_BIN_PATH}"
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"$ENV{VISIT_ROOT_DIR}"
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"$ENV{VISIT_BIN_PATH}"
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PATH_SUFFIXES bin bin64
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NO_DEFAULT_PATH
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)
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IF( NOT VISIT_XML_CMAKE )
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MESSAGE( FATAL_ERROR "xml2cmake not found in:\n"
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"${VISIT_ROOT_DIR}/bin\n"
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"${VISIT_BIN_PATH}\n"
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"$ENV{VISIT_ROOT_DIR}/bin\n"
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"$ENV{VISIT_BIN_PATH}\n"
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)
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ELSE()
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MESSAGE( "VISIT_XML_CMAKE=${VISIT_XML_CMAKE}" )
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ENDIF()
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# Install plugin
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MACRO( VISIT_PLUGIN SRC_DIR TARGET )
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CONFIGURE_FILE( "${CMAKE_CURRENT_SOURCE_DIR}/${SRC_DIR}/${TARGET}.xml" "${CMAKE_CURRENT_BINARY_DIR}/${SRC_DIR}/${TARGET}.xml" )
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FILE( GLOB ConfigFiles RELATIVE "${CMAKE_CURRENT_SOURCE_DIR}/${SRC_DIR}"
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"${CMAKE_CURRENT_SOURCE_DIR}/${SRC_DIR}/*.C" "${CMAKE_CURRENT_SOURCE_DIR}/${SRC_DIR}/*.h" )
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ADD_CUSTOM_TARGET(copy-${SRC_DIR})
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FOREACH( ConfigFile ${ConfigFiles} )
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ADD_CUSTOM_COMMAND(TARGET copy-${SRC_DIR} PRE_BUILD
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COMMAND ${CMAKE_COMMAND} -E copy "${CMAKE_CURRENT_SOURCE_DIR}/${SRC_DIR}/${ConfigFile}"
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"${CMAKE_CURRENT_BINARY_DIR}/${SRC_DIR}/${ConfigFile}"
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)
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ENDFOREACH()
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ADD_CUSTOM_TARGET(
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${SRC_DIR}
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COMMAND ${VISIT_XML_CMAKE} -clobber ${TARGET}.xml
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COMMAND ${CMAKE_COMMAND} -DCMAKE_BUILD_TYPE=${CMAKE_BUILD_TYPE}
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-DCMAKE_C_COMPILER=${CMAKE_C_COMPILER} -DCMAKE_C_FLAGS=${CMAKE_C_FLAGS}
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-DCMAKE_CXX_COMPILER=${CMAKE_CXX_COMPILER} -DCMAKE_CXX_FLAGS=${CMAKE_CXX_FLAGS}
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-DVISIT_NOLINK_MPI_WITH_LIBRARIES=TRUE
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.
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COMMAND make
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WORKING_DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}/${SRC_DIR}"
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SOURCES ${SRC_DIR}
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DEPENDS lbpm-wia copy-${SRC_DIR}
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)
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ENDMACRO()
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@ -48,8 +48,6 @@ SET( USE_MPI TRUE )
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IF ( DEFINED ENV{USE_MPI} )
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IF ( DEFINED ENV{USE_MPI} )
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SET( USE_MPI $ENV{USE_MPI} )
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SET( USE_MPI $ENV{USE_MPI} )
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ENDIF()
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ENDIF()
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SET( USE_VISIT $ENV{USE_VISIT} )
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SET( VISIT_ROOT_DIR $ENV{VISIT_ROOT_DIR} )
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# Get the source directory based on the current directory
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# Get the source directory based on the current directory
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@ -106,9 +104,6 @@ ELSEIF( ${CTEST_SCRIPT_ARG} STREQUAL "valgrind-cuda" )
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ELSE()
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ELSE()
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MESSAGE(FATAL_ERROR "Invalid build (${CTEST_SCRIPT_ARG}): ctest -S /path/to/script,build (debug/opt/valgrind")
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MESSAGE(FATAL_ERROR "Invalid build (${CTEST_SCRIPT_ARG}): ctest -S /path/to/script,build (debug/opt/valgrind")
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ENDIF()
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ENDIF()
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IF ( USE_VISIT )
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STRING( REGEX REPLACE "LBPM-WIA-" "LBPM-WIA-visit-" CTEST_BUILD_NAME "${CTEST_BUILD_NAME}" )
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ENDIF()
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IF ( BUILDNAME_POSTFIX )
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IF ( BUILDNAME_POSTFIX )
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SET( CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${BUILDNAME_POSTFIX}" )
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SET( CTEST_BUILD_NAME "${CTEST_BUILD_NAME}-${BUILDNAME_POSTFIX}" )
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ENDIF()
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ENDIF()
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@ -161,9 +156,6 @@ IF ( BUILD_SERIAL )
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ELSE()
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ELSE()
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SET( CTEST_BUILD_COMMAND "${CMAKE_MAKE_PROGRAM} -i -j ${N_PROCS} install" )
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SET( CTEST_BUILD_COMMAND "${CMAKE_MAKE_PROGRAM} -i -j ${N_PROCS} install" )
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ENDIF()
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ENDIF()
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IF ( USE_VISIT )
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SET( CTEST_BUILD_COMMAND "${CTEST_BUILD_COMMAND} visit" )
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ENDIF()
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SET( CTEST_CUSTOM_WARNING_EXCEPTION "has no symbols" )
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SET( CTEST_CUSTOM_WARNING_EXCEPTION "has no symbols" )
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@ -218,9 +210,6 @@ IF ( USE_TIMER )
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ELSE()
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ELSE()
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SET( CTEST_OPTIONS "${CTEST_OPTIONS};-DUSE_TIMER:BOOL=false" )
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SET( CTEST_OPTIONS "${CTEST_OPTIONS};-DUSE_TIMER:BOOL=false" )
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ENDIF()
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ENDIF()
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IF ( USE_VISIT )
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SET( CTEST_OPTIONS "${CTEST_OPTIONS};-DUSE_VISIT:BOOL=true;-DVISIT_ROOT_DIR='${VISIT_ROOT_DIR}'" )
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ENDIF()
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IF ( USE_CUDA )
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IF ( USE_CUDA )
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SET( CTEST_OPTIONS "${CTEST_OPTIONS};-DUSE_CUDA:BOOL=true;-DCMAKE_CUDA_FLAGS='${CUDA_FLAGS}';-DCMAKE_CUDA_HOST_COMPILER=${CUDA_HOST_COMPILER};-DLIB_TYPE=${LIB_TYPE}" )
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SET( CTEST_OPTIONS "${CTEST_OPTIONS};-DUSE_CUDA:BOOL=true;-DCMAKE_CUDA_FLAGS='${CUDA_FLAGS}';-DCMAKE_CUDA_HOST_COMPILER=${CUDA_HOST_COMPILER};-DLIB_TYPE=${LIB_TYPE}" )
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ELSE()
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ELSE()
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@ -225,12 +225,6 @@ MACRO( CONFIGURE_SYSTEM )
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IF( NOT CMAKE_BUILD_TYPE )
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IF( NOT CMAKE_BUILD_TYPE )
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MESSAGE(FATAL_ERROR "CMAKE_BUILD_TYPE is not set")
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MESSAGE(FATAL_ERROR "CMAKE_BUILD_TYPE is not set")
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ENDIF()
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ENDIF()
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# Disable gxx debug flags if we are building the visit plugin
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# This is necessary to prvent segfaults caused by inconsistent object sizes
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# caused by std::vector<std::string> in the avtMeshMetaData class
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IF ( USE_VISIT )
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SET( DISABLE_GXX_DEBUG 1 )
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ENDIF()
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# Remove extra library links
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# Remove extra library links
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# Get the compiler
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# Get the compiler
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SET_COMPILER_FLAGS()
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SET_COMPILER_FLAGS()
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@ -24,8 +24,5 @@ cmake \
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-D USE_TIMER=0 \
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-D USE_TIMER=0 \
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${HOME}/Programs/LBPM-WIA
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${HOME}/Programs/LBPM-WIA
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# -D SILO_LIB="/usr/local/visit/2.9.2/linux-x86_64/lib/libsiloh5.a" \
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# -D SILO_DIRECTORY="/usr/local/visit/2.9.2/linux-x86_64/include/silo" \
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@ -25,9 +25,7 @@ i -D CMAKE_CXX_COMPILER:PATH=/home/christopher/openmpi/install_dir/bin/mpicxx
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-D CUDA_HOST_COMPILER="/usr/bin/gcc-4.9" \
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-D CUDA_HOST_COMPILER="/usr/bin/gcc-4.9" \
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-D USE_CUDA=1 \
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-D USE_CUDA=1 \
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-D USE_TIMER=0 \
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-D USE_TIMER=0 \
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-D USE_VISIT=true \
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-D VISIT_ROOT_DIR=/home/christopher/visit2_12_2.linux-x86_64/bin \
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/home/christopher/repos/LBPM-WIA
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/home/christopher/repos/LBPM-WIA
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make -j8 install
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make -j8 install
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#make visit
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@ -121,7 +121,7 @@ int main(int argc, char **argv)
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if (rank==0)
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if (rank==0)
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printf("Mean error %0.4f \n", err);
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printf("Mean error %0.4f \n", err);
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// Write the results to visit
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// Write the results
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Array<int> ID0(id.size());
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Array<int> ID0(id.size());
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ID0.copy( id );
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ID0.copy( id );
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Array<double> ID(Nx,Ny,Nz);
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Array<double> ID(Nx,Ny,Nz);
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@ -319,15 +319,15 @@ int main(int argc, char **argv)
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}
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}
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// Write the results to visit
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// Write the results
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if (rank==0) printf("Writing output \n");
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if (rank==0) printf("Writing output \n");
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std::vector<IO::MeshDataStruct> meshData(N_levels);
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std::vector<IO::MeshDataStruct> meshData(N_levels);
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for (size_t i=0; i<Nx.size(); i++) {
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for (size_t i=0; i<Nx.size(); i++) {
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// Mesh
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// Mesh
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meshData[i].meshName = "Level " + std::to_string(i+1);
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meshData[i].meshName = "Level " + std::to_string(i+1);
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meshData[i].mesh = std::shared_ptr<IO::DomainMesh>( new IO::DomainMesh(Dm[i]->rank_info,Nx[i],Ny[i],Nz[i],Lx,Ly,Lz) );
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meshData[i].mesh = std::make_shared<IO::DomainMesh>( Dm[i]->rank_info,Nx[i],Ny[i],Nz[i],Lx,Ly,Lz );
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// Source data
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// Source data
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std::shared_ptr<IO::Variable> OrigData( new IO::Variable() );
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auto OrigData = std::make_shared<IO::Variable>();
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OrigData->name = "Source Data";
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OrigData->name = "Source Data";
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OrigData->type = IO::VariableType::VolumeVariable;
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OrigData->type = IO::VariableType::VolumeVariable;
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OrigData->dim = 1;
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OrigData->dim = 1;
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@ -335,7 +335,7 @@ int main(int argc, char **argv)
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meshData[i].vars.push_back(OrigData);
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meshData[i].vars.push_back(OrigData);
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fillDouble[i]->copy( LOCVOL[i], OrigData->data );
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fillDouble[i]->copy( LOCVOL[i], OrigData->data );
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// Non-Local Mean
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// Non-Local Mean
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std::shared_ptr<IO::Variable> NonLocMean( new IO::Variable() );
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auto NonLocMean = std::make_shared<IO::Variable>();
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NonLocMean->name = "Non-Local Mean";
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NonLocMean->name = "Non-Local Mean";
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NonLocMean->type = IO::VariableType::VolumeVariable;
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NonLocMean->type = IO::VariableType::VolumeVariable;
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NonLocMean->dim = 1;
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NonLocMean->dim = 1;
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@ -343,7 +343,7 @@ int main(int argc, char **argv)
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meshData[i].vars.push_back(NonLocMean);
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meshData[i].vars.push_back(NonLocMean);
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fillDouble[i]->copy( NonLocalMean[i], NonLocMean->data );
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fillDouble[i]->copy( NonLocalMean[i], NonLocMean->data );
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// Segmented Data
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// Segmented Data
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std::shared_ptr<IO::Variable> SegData( new IO::Variable() );
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auto SegData = std::make_shared<IO::Variable>();
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SegData->name = "Segmented Data";
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SegData->name = "Segmented Data";
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SegData->type = IO::VariableType::VolumeVariable;
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SegData->type = IO::VariableType::VolumeVariable;
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SegData->dim = 1;
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SegData->dim = 1;
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@ -351,7 +351,7 @@ int main(int argc, char **argv)
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meshData[i].vars.push_back(SegData);
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meshData[i].vars.push_back(SegData);
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fillDouble[i]->copy( ID[i], SegData->data );
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fillDouble[i]->copy( ID[i], SegData->data );
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// Signed Distance
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// Signed Distance
|
||||||
std::shared_ptr<IO::Variable> DistData( new IO::Variable() );
|
auto DistData = std::make_shared<IO::Variable>();
|
||||||
DistData->name = "Signed Distance";
|
DistData->name = "Signed Distance";
|
||||||
DistData->type = IO::VariableType::VolumeVariable;
|
DistData->type = IO::VariableType::VolumeVariable;
|
||||||
DistData->dim = 1;
|
DistData->dim = 1;
|
||||||
@ -359,7 +359,7 @@ int main(int argc, char **argv)
|
|||||||
meshData[i].vars.push_back(DistData);
|
meshData[i].vars.push_back(DistData);
|
||||||
fillDouble[i]->copy( Dist[i], DistData->data );
|
fillDouble[i]->copy( Dist[i], DistData->data );
|
||||||
// Smoothed Data
|
// Smoothed Data
|
||||||
std::shared_ptr<IO::Variable> SmoothData( new IO::Variable() );
|
auto SmoothData = std::make_shared<IO::Variable>();
|
||||||
SmoothData->name = "Smoothed Data";
|
SmoothData->name = "Smoothed Data";
|
||||||
SmoothData->type = IO::VariableType::VolumeVariable;
|
SmoothData->type = IO::VariableType::VolumeVariable;
|
||||||
SmoothData->dim = 1;
|
SmoothData->dim = 1;
|
||||||
|
|||||||
@ -346,7 +346,7 @@ int main(int argc, char **argv)
|
|||||||
*/
|
*/
|
||||||
|
|
||||||
{
|
{
|
||||||
// Write the results to visit
|
// Write the results
|
||||||
if (rank==0) printf("Setting up visualization structure \n");
|
if (rank==0) printf("Setting up visualization structure \n");
|
||||||
// std::vector<IO::MeshDataStruct> meshData(N_levels);
|
// std::vector<IO::MeshDataStruct> meshData(N_levels);
|
||||||
std::vector<IO::MeshDataStruct> meshData(1);
|
std::vector<IO::MeshDataStruct> meshData(1);
|
||||||
|
|||||||
@ -1,24 +0,0 @@
|
|||||||
<?xml version="1.0"?>
|
|
||||||
<Plugin name="LBM" type="database" label="LBM" version="1.0" mdspecificcode="true" dbtype="MTMD">
|
|
||||||
<FilePatterns>
|
|
||||||
*.LBM
|
|
||||||
</FilePatterns>
|
|
||||||
<CXXFLAGS>
|
|
||||||
-I${LBPM_INSTALL_DIR}/include
|
|
||||||
-I${TIMER_INCLUDE}
|
|
||||||
${MPI_CXXFLAGS}
|
|
||||||
${TIMER_CXXFLAGS}
|
|
||||||
</CXXFLAGS>
|
|
||||||
<LDFLAGS>
|
|
||||||
-L${LBPM_INSTALL_DIR}/lib
|
|
||||||
-L${CMAKE_CURRENT_BINARY_DIR}/..
|
|
||||||
${TIMER_LDFLAGS}
|
|
||||||
${MPI_LINK_FLAGS}
|
|
||||||
</LDFLAGS>
|
|
||||||
<LIBS>
|
|
||||||
-llbpm-wia
|
|
||||||
${TIMER_LDLIBS}
|
|
||||||
${MPI_LIBRARIES}
|
|
||||||
</LIBS>
|
|
||||||
</Plugin>
|
|
||||||
|
|
||||||
@ -1,92 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
#include <LBMPluginInfo.h>
|
|
||||||
#include <avtLBMFileFormat.h>
|
|
||||||
#include <avtMTMDFileFormatInterface.h>
|
|
||||||
#include <avtGenericDatabase.h>
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMCommonPluginInfo::GetDatabaseType
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Returns the type of a LBM database.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
DatabaseType
|
|
||||||
LBMCommonPluginInfo::GetDatabaseType()
|
|
||||||
{
|
|
||||||
return DB_TYPE_MTMD;
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMCommonPluginInfo::SetupDatabase
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Sets up a LBM database.
|
|
||||||
//
|
|
||||||
// Arguments:
|
|
||||||
// list A list of file names.
|
|
||||||
// nList The number of timesteps in list.
|
|
||||||
// nBlocks The number of blocks in the list.
|
|
||||||
//
|
|
||||||
// Returns: A LBM database from list.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
avtDatabase *
|
|
||||||
LBMCommonPluginInfo::SetupDatabase(const char *const *list,
|
|
||||||
int nList, int nBlock)
|
|
||||||
{
|
|
||||||
// ignore any nBlocks past 1
|
|
||||||
int nTimestepGroups = nList / nBlock;
|
|
||||||
avtMTMDFileFormat **ffl = new avtMTMDFileFormat*[nTimestepGroups];
|
|
||||||
for (int i = 0 ; i < nTimestepGroups ; i++)
|
|
||||||
{
|
|
||||||
ffl[i] = new avtLBMFileFormat(list[i*nBlock]);
|
|
||||||
}
|
|
||||||
avtMTMDFileFormatInterface *inter
|
|
||||||
= new avtMTMDFileFormatInterface(ffl, nTimestepGroups);
|
|
||||||
return new avtGenericDatabase(inter);
|
|
||||||
}
|
|
||||||
|
|
||||||
@ -1,73 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
#include <LBMPluginInfo.h>
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Function: GetEngineInfo
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return a new EnginePluginInfo for the LBM database.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
extern "C" DBP_EXPORT EngineDatabasePluginInfo* LBM_GetEngineInfo()
|
|
||||||
{
|
|
||||||
return new LBMEnginePluginInfo;
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMEnginePluginInfo::GetWriter
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Sets up a LBM writer.
|
|
||||||
//
|
|
||||||
// Returns: A LBM writer.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
avtDatabaseWriter *
|
|
||||||
LBMEnginePluginInfo::GetWriter(void)
|
|
||||||
{
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
|
|
||||||
@ -1,60 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
#include <LBMPluginInfo.h>
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Function: GetMDServerInfo
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return a new MDServerPluginInfo for the LBM database.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
extern "C" DBP_EXPORT MDServerDatabasePluginInfo* LBM_GetMDServerInfo()
|
|
||||||
{
|
|
||||||
return new LBMMDServerPluginInfo;
|
|
||||||
}
|
|
||||||
|
|
||||||
// this makes compilers happy... remove if we ever have functions here
|
|
||||||
void LBMMDServerPluginInfo::dummy()
|
|
||||||
{
|
|
||||||
}
|
|
||||||
|
|
||||||
@ -1,206 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
// ************************************************************************* //
|
|
||||||
// File: LBMPluginInfo.C
|
|
||||||
// ************************************************************************* //
|
|
||||||
|
|
||||||
#include <LBMPluginInfo.h>
|
|
||||||
|
|
||||||
#include <visit-config.h>
|
|
||||||
VISIT_PLUGIN_VERSION(LBM,DBP_EXPORT)
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Function: GetGeneralInfo
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return a new GeneralPluginInfo for the LBM database.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
extern "C" DBP_EXPORT GeneralDatabasePluginInfo* LBM_GetGeneralInfo()
|
|
||||||
{
|
|
||||||
return new LBMGeneralPluginInfo;
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::GetName
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return the name of the database plugin.
|
|
||||||
//
|
|
||||||
// Returns: A pointer to the name of the database plugin.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
const char *
|
|
||||||
LBMGeneralPluginInfo::GetName() const
|
|
||||||
{
|
|
||||||
return "LBM";
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::GetVersion
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return the version of the database plugin.
|
|
||||||
//
|
|
||||||
// Returns: A pointer to the version of the database plugin.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
const char *
|
|
||||||
LBMGeneralPluginInfo::GetVersion() const
|
|
||||||
{
|
|
||||||
return "1.0";
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::GetID
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return the id of the database plugin.
|
|
||||||
//
|
|
||||||
// Returns: A pointer to the id of the database plugin.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
const char *
|
|
||||||
LBMGeneralPluginInfo::GetID() const
|
|
||||||
{
|
|
||||||
return "LBM_1.0";
|
|
||||||
}
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::EnabledByDefault
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return true if this plugin should be enabled by default; false otherwise.
|
|
||||||
//
|
|
||||||
// Returns: true/false
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
bool
|
|
||||||
LBMGeneralPluginInfo::EnabledByDefault() const
|
|
||||||
{
|
|
||||||
return true;
|
|
||||||
}
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::HasWriter
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Return true if this plugin has a database writer.
|
|
||||||
//
|
|
||||||
// Returns: true/false
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
bool
|
|
||||||
LBMGeneralPluginInfo::HasWriter() const
|
|
||||||
{
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::GetDefaultFilePatterns
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Returns the default patterns for a LBM database.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
std::vector<std::string>
|
|
||||||
LBMGeneralPluginInfo::GetDefaultFilePatterns() const
|
|
||||||
{
|
|
||||||
std::vector<std::string> defaultPatterns;
|
|
||||||
defaultPatterns.push_back("*.LBM");
|
|
||||||
|
|
||||||
return defaultPatterns;
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::AreDefaultFilePatternsStrict
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Returns if the file patterns for a LBM database are
|
|
||||||
// intended to be interpreted strictly by default.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
bool
|
|
||||||
LBMGeneralPluginInfo::AreDefaultFilePatternsStrict() const
|
|
||||||
{
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: LBMGeneralPluginInfo::OpensWholeDirectory
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Returns if the LBM plugin opens a whole directory name
|
|
||||||
// instead of a single file.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
bool
|
|
||||||
LBMGeneralPluginInfo::OpensWholeDirectory() const
|
|
||||||
{
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
@ -1,100 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// LBMPluginInfo.h
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
#ifndef LBM_PLUGIN_INFO_H
|
|
||||||
#define LBM_PLUGIN_INFO_H
|
|
||||||
#include <DatabasePluginInfo.h>
|
|
||||||
#include <database_plugin_exports.h>
|
|
||||||
|
|
||||||
class avtDatabase;
|
|
||||||
class avtDatabaseWriter;
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Class: LBMDatabasePluginInfo
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Classes that provide all the information about the LBM plugin.
|
|
||||||
// Portions are separated into pieces relevant to the appropriate
|
|
||||||
// components of VisIt.
|
|
||||||
//
|
|
||||||
// Programmer: generated by xml2info
|
|
||||||
// Creation: omitted
|
|
||||||
//
|
|
||||||
// Modifications:
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
class LBMGeneralPluginInfo : public virtual GeneralDatabasePluginInfo
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
virtual const char *GetName() const;
|
|
||||||
virtual const char *GetVersion() const;
|
|
||||||
virtual const char *GetID() const;
|
|
||||||
virtual bool EnabledByDefault() const;
|
|
||||||
virtual bool HasWriter() const;
|
|
||||||
virtual std::vector<std::string> GetDefaultFilePatterns() const;
|
|
||||||
virtual bool AreDefaultFilePatternsStrict() const;
|
|
||||||
virtual bool OpensWholeDirectory() const;
|
|
||||||
};
|
|
||||||
|
|
||||||
class LBMCommonPluginInfo : public virtual CommonDatabasePluginInfo, public virtual LBMGeneralPluginInfo
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
virtual DatabaseType GetDatabaseType();
|
|
||||||
virtual avtDatabase *SetupDatabase(const char * const *list,
|
|
||||||
int nList, int nBlock);
|
|
||||||
};
|
|
||||||
|
|
||||||
class LBMMDServerPluginInfo : public virtual MDServerDatabasePluginInfo, public virtual LBMCommonPluginInfo
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
// this makes compilers happy... remove if we ever have functions here
|
|
||||||
virtual void dummy();
|
|
||||||
};
|
|
||||||
|
|
||||||
class LBMEnginePluginInfo : public virtual EngineDatabasePluginInfo, public virtual LBMCommonPluginInfo
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
virtual avtDatabaseWriter *GetWriter(void);
|
|
||||||
};
|
|
||||||
|
|
||||||
#endif
|
|
||||||
@ -1,498 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
// ************************************************************************* //
|
|
||||||
// avtLBMFileFormat.C //
|
|
||||||
// ************************************************************************* //
|
|
||||||
|
|
||||||
#include <avtLBMFileFormat.h>
|
|
||||||
#include <DebugStream.h>
|
|
||||||
|
|
||||||
#include <string>
|
|
||||||
|
|
||||||
// LBPM headers
|
|
||||||
#include "IO/Reader.h"
|
|
||||||
#include "IO/IOHelpers.h"
|
|
||||||
#include "IO/PIO.h"
|
|
||||||
#include "common/Utilities.h"
|
|
||||||
|
|
||||||
// vtk headers
|
|
||||||
#include <vtkFloatArray.h>
|
|
||||||
#include <vtkRectilinearGrid.h>
|
|
||||||
#include <vtkStructuredGrid.h>
|
|
||||||
#include <vtkUnstructuredGrid.h>
|
|
||||||
#include <vtkPointSet.h>
|
|
||||||
#include <vtkCellType.h>
|
|
||||||
#include <vtkPolyData.h>
|
|
||||||
#include <vtkCellArray.h>
|
|
||||||
|
|
||||||
|
|
||||||
#include <avtDatabaseMetaData.h>
|
|
||||||
#include <vtkHelpers.h>
|
|
||||||
|
|
||||||
#include <DBOptionsAttributes.h>
|
|
||||||
#include <Expression.h>
|
|
||||||
|
|
||||||
#include <InvalidVariableException.h>
|
|
||||||
|
|
||||||
|
|
||||||
#if defined(WIN32) || defined(_WIN32) || defined(WIN64) || defined(_WIN64)
|
|
||||||
#define USE_WINDOWS
|
|
||||||
#elif defined(__APPLE__)
|
|
||||||
#define USE_MAC
|
|
||||||
#else
|
|
||||||
#define USE_LINUX
|
|
||||||
#endif
|
|
||||||
#ifdef USE_WINDOWS
|
|
||||||
#include <windows.h>
|
|
||||||
#include <stdio.h>
|
|
||||||
#define TIME_TYPE LARGE_INTEGER
|
|
||||||
#define get_time(x) QueryPerformanceCounter(x)
|
|
||||||
#define get_frequency(f) QueryPerformanceFrequency(f)
|
|
||||||
#define get_diff(start,end,f) \
|
|
||||||
static_cast<double>(end.QuadPart-start.QuadPart)/static_cast<double>(f.QuadPart)
|
|
||||||
#elif defined(USE_LINUX) || defined(USE_MAX)
|
|
||||||
#include <sys/time.h>
|
|
||||||
#define TIME_TYPE timeval
|
|
||||||
#define get_time(x) gettimeofday(x,NULL);
|
|
||||||
#define get_frequency(f) (*f=timeval())
|
|
||||||
#define get_diff(start,end,f) 1e-6*static_cast<double>( \
|
|
||||||
0xF4240*(static_cast<int64_t>(end.tv_sec)-static_cast<int64_t>(start.tv_sec)) + \
|
|
||||||
(static_cast<int64_t>(end.tv_usec)-static_cast<int64_t>(start.tv_usec)) )
|
|
||||||
#else
|
|
||||||
#error Unknown OS
|
|
||||||
#endif
|
|
||||||
|
|
||||||
|
|
||||||
// Null stream buffer
|
|
||||||
class NullBufferClass : public std::streambuf {
|
|
||||||
public:
|
|
||||||
virtual std::streamsize xsputn(const char *s, std::streamsize n) { return n; }
|
|
||||||
virtual int overflow(int c) { return 1; }
|
|
||||||
virtual void setOutputStream( std::ostream* ) {}
|
|
||||||
};
|
|
||||||
|
|
||||||
|
|
||||||
// Output streams
|
|
||||||
#if 0
|
|
||||||
static IO::ParallelStreamBuffer DebugStreamBuffer1;
|
|
||||||
static IO::ParallelStreamBuffer DebugStreamBuffer2;
|
|
||||||
#else
|
|
||||||
static NullBufferClass DebugStreamBuffer1;
|
|
||||||
static NullBufferClass DebugStreamBuffer2;
|
|
||||||
#endif
|
|
||||||
std::ostream DebugStream1(&DebugStreamBuffer1);
|
|
||||||
std::ostream DebugStream2(&DebugStreamBuffer2);
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtLBMFileFormat constructor
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
avtLBMFileFormat::avtLBMFileFormat(const char *filename)
|
|
||||||
: avtMTMDFileFormat(filename)
|
|
||||||
{
|
|
||||||
// Set abort behavior
|
|
||||||
Utilities::setAbortBehavior(true,true,true);
|
|
||||||
Utilities::setErrorHandlers();
|
|
||||||
// Set debug streams
|
|
||||||
DebugStreamBuffer1.setOutputStream( &DebugStream::Stream1() );
|
|
||||||
DebugStreamBuffer2.setOutputStream( &DebugStream::Stream2() );
|
|
||||||
DebugStreamBuffer1.setOutputStream( &std::cout );
|
|
||||||
// Get the path to the input file
|
|
||||||
std::string file(filename);
|
|
||||||
size_t k1 = file.rfind(47);
|
|
||||||
size_t k2 = file.rfind(92);
|
|
||||||
if ( k1==std::string::npos ) { k1=0; }
|
|
||||||
if ( k2==std::string::npos ) { k2=0; }
|
|
||||||
d_path = file.substr(0,std::max(k1,k2));
|
|
||||||
// Load the summary file
|
|
||||||
DebugStream1 << "Loading " << filename << std::endl;
|
|
||||||
d_timesteps = IO::readTimesteps(filename);
|
|
||||||
// Read the mesh dabases
|
|
||||||
d_database.clear();
|
|
||||||
d_database.resize(d_timesteps.size());
|
|
||||||
for (size_t i=0; i<d_timesteps.size(); i++)
|
|
||||||
d_database[i] = IO::getMeshList(d_path,d_timesteps[i]);
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtEMSTDFileFormat::GetNTimesteps
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Tells the rest of the code how many timesteps there are in this file.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
int
|
|
||||||
avtLBMFileFormat::GetNTimesteps(void)
|
|
||||||
{
|
|
||||||
DebugStream2 << "avtLBMFileFormat::GetNTimesteps" << std::endl;
|
|
||||||
return static_cast<int>(d_timesteps.size());
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtLBMFileFormat::FreeUpResources
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// When VisIt is done focusing on a particular timestep, it asks that
|
|
||||||
// timestep to free up any resources (memory, file descriptors) that
|
|
||||||
// it has associated with it. This method is the mechanism for doing
|
|
||||||
// that.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
void
|
|
||||||
avtLBMFileFormat::FreeUpResources(void)
|
|
||||||
{
|
|
||||||
DebugStream1 << "avtLBMFileFormat::FreeUpResources" << std::endl;
|
|
||||||
std::map<std::string,vtkObjectBase*>::iterator it;
|
|
||||||
for ( it=d_meshcache.begin(); it!=d_meshcache.end(); ++it ) {
|
|
||||||
DebugStream2 << " deleting: " << it->first << std::endl;
|
|
||||||
vtkObjectBase* obj = it->second;
|
|
||||||
it->second = NULL;
|
|
||||||
if ( obj!=NULL )
|
|
||||||
obj->Delete();
|
|
||||||
}
|
|
||||||
DebugStream2 << " finished" << std::endl;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtLBMFileFormat::PopulateDatabaseMetaData
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// This database meta-data object is like a table of contents for the
|
|
||||||
// file. By populating it, you are telling the rest of VisIt what
|
|
||||||
// information it can request from you.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
void
|
|
||||||
avtLBMFileFormat::PopulateDatabaseMetaData(avtDatabaseMetaData *md, int timestate)
|
|
||||||
{
|
|
||||||
DebugStream1 << "avtLBMFileFormat::PopulateDatabaseMetaData: " << timestate << std::endl;
|
|
||||||
// Add the mesh domains to the meta data
|
|
||||||
const std::vector<IO::MeshDatabase> database = d_database[timestate];
|
|
||||||
for (size_t i=0; i<database.size(); i++) {
|
|
||||||
DebugStream2 << " Adding " << database[i].name << std::endl;
|
|
||||||
avtMeshMetaData *mmd = new avtMeshMetaData;
|
|
||||||
mmd->name = database[i].name;
|
|
||||||
mmd->meshType = vtkMeshType(database[i].type);
|
|
||||||
mmd->spatialDimension = 3;
|
|
||||||
mmd->topologicalDimension = vtkTopDim(database[i].type);
|
|
||||||
if ( mmd->meshType==AVT_SURFACE_MESH )
|
|
||||||
mmd->topologicalDimension = 2;
|
|
||||||
mmd->numBlocks = database[i].domains.size();
|
|
||||||
mmd->blockNames.resize( mmd->numBlocks );
|
|
||||||
for (int j=0; j<mmd->numBlocks; j++)
|
|
||||||
mmd->blockNames[j] = database[i].domains[j].name;
|
|
||||||
md->Add(mmd);
|
|
||||||
// Add expressions for the coordinates
|
|
||||||
const char *xyz[3] = {"x","y","z"};
|
|
||||||
for(int j=0; j<3; j++) {
|
|
||||||
Expression expr;
|
|
||||||
char expdef[100], expname[100];
|
|
||||||
sprintf(expdef,"coord(<%s>)[%i]",mmd->name.c_str(),j);
|
|
||||||
sprintf(expname,"%s/%s",xyz[j],mmd->name.c_str());
|
|
||||||
expr.SetName(expname);
|
|
||||||
expr.SetDefinition(expdef);
|
|
||||||
md->AddExpression(&expr);
|
|
||||||
}
|
|
||||||
// Add the variables
|
|
||||||
for (size_t j=0; j<database[i].variables.size(); j++) {
|
|
||||||
IO::VariableDatabase variable = database[i].variables[j];
|
|
||||||
std::string varname = variable.name + "/" + mmd->name;
|
|
||||||
avtCentering center = AVT_UNKNOWN_CENT;
|
|
||||||
if ( variable.type==IO::VariableType::NodeVariable ) {
|
|
||||||
center = AVT_NODECENT;
|
|
||||||
} else if ( variable.type==IO::VariableType::SurfaceVariable ) {
|
|
||||||
center = AVT_ZONECENT;
|
|
||||||
} else if ( variable.type==IO::VariableType::VolumeVariable ) {
|
|
||||||
center = AVT_ZONECENT;
|
|
||||||
}
|
|
||||||
if ( variable.dim==1 ) {
|
|
||||||
AddScalarVarToMetaData( md, varname, mmd->name, center );
|
|
||||||
} else if ( variable.dim==3 ) {
|
|
||||||
AddVectorVarToMetaData( md, varname, mmd->name, center, variable.dim );
|
|
||||||
} else if ( variable.dim==9 ) {
|
|
||||||
AddTensorVarToMetaData( md, varname, mmd->name, center, variable.dim );
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
DebugStream2 << " Finished" << std::endl;
|
|
||||||
|
|
||||||
//
|
|
||||||
// CODE TO ADD A MATERIAL
|
|
||||||
//
|
|
||||||
// string mesh_for_mat = meshname; // ??? -- could be multiple meshes
|
|
||||||
// string matname = ...
|
|
||||||
// int nmats = ...;
|
|
||||||
// vector<string> mnames;
|
|
||||||
// for (int i = 0 ; i < nmats ; i++)
|
|
||||||
// {
|
|
||||||
// char str[32];
|
|
||||||
// sprintf(str, "mat%d", i);
|
|
||||||
// -- or --
|
|
||||||
// strcpy(str, "Aluminum");
|
|
||||||
// mnames.push_back(str);
|
|
||||||
// }
|
|
||||||
//
|
|
||||||
// Here's the call that tells the meta-data object that we have a mat:
|
|
||||||
//
|
|
||||||
// AddMaterialToMetaData(md, matname, mesh_for_mat, nmats, mnames);
|
|
||||||
//
|
|
||||||
//
|
|
||||||
// Here's the way to add expressions:
|
|
||||||
//Expression momentum_expr;
|
|
||||||
//momentum_expr.SetName("momentum");
|
|
||||||
//momentum_expr.SetDefinition("{u, v}");
|
|
||||||
//momentum_expr.SetType(Expression::VectorMeshVar);
|
|
||||||
//md->AddExpression(&momentum_expr);
|
|
||||||
//Expression KineticEnergy_expr;
|
|
||||||
//KineticEnergy_expr.SetName("KineticEnergy");
|
|
||||||
//KineticEnergy_expr.SetDefinition("0.5*(momentum*momentum)/(rho*rho)");
|
|
||||||
//KineticEnergy_expr.SetType(Expression::ScalarMeshVar);
|
|
||||||
//md->AddExpression(&KineticEnergy_expr);
|
|
||||||
//
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtLBMFileFormat::GetMesh
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Gets the mesh associated with this file. The mesh is returned as a
|
|
||||||
// derived type of vtkDataSet (ie vtkRectilinearGrid, vtkStructuredGrid,
|
|
||||||
// vtkUnstructuredGrid, etc).
|
|
||||||
//
|
|
||||||
// Arguments:
|
|
||||||
// timestate The index of the timestate. If GetNTimesteps returned
|
|
||||||
// 'N' time steps, this is guaranteed to be between 0 and N-1.
|
|
||||||
// domain The index of the domain. If there are NDomains, this
|
|
||||||
// value is guaranteed to be between 0 and NDomains-1,
|
|
||||||
// regardless of block origin.
|
|
||||||
// meshname The name of the mesh of interest. This can be ignored if
|
|
||||||
// there is only one mesh.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
vtkDataSet *
|
|
||||||
avtLBMFileFormat::GetMesh(int timestate, int domain, const char *meshname)
|
|
||||||
{
|
|
||||||
DebugStream1 << "avtLBMFileFormat::GetMesh - " << meshname
|
|
||||||
<< "," << timestate << "," << domain << std::endl;
|
|
||||||
TIME_TYPE start, stop, freq;
|
|
||||||
get_frequency(&freq);
|
|
||||||
get_time(&start);
|
|
||||||
// Check if we have a cached copy of the mesh
|
|
||||||
char cache_name[1000];
|
|
||||||
sprintf(cache_name,"%i-%i-%s",timestate,domain,meshname);
|
|
||||||
if ( d_meshcache.find(cache_name)!=d_meshcache.end() )
|
|
||||||
return dynamic_cast<vtkDataSet*>(d_meshcache.find(cache_name)->second);
|
|
||||||
// Read the mesh
|
|
||||||
std::shared_ptr<IO::Mesh> mesh;
|
|
||||||
const std::vector<IO::MeshDatabase> database = d_database[timestate];
|
|
||||||
const std::string timestep = d_timesteps[timestate];
|
|
||||||
for (size_t i=0; i<database.size(); i++) {
|
|
||||||
if ( database[i].name==std::string(meshname) ) {
|
|
||||||
DebugStream2 << " calling getMesh" << std::endl;
|
|
||||||
try {
|
|
||||||
mesh = IO::getMesh(d_path,timestep,database[i],domain);
|
|
||||||
} catch (const std::exception &err) {
|
|
||||||
DebugStream1 << " Caught errror calling getMesh:" << std::endl;
|
|
||||||
DebugStream1 << err.what() << std::endl;
|
|
||||||
} catch (...) {
|
|
||||||
DebugStream1 << " Caught unknown errror calling getMesh" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
if ( mesh==NULL ) {
|
|
||||||
DebugStream1 << " Error loading mesh" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
// Create the mesh in vtk
|
|
||||||
vtkDataSet* vtkMesh = meshToVTK(mesh);
|
|
||||||
DebugStream2 << " mesh created:" << std::endl;
|
|
||||||
ASSERT(vtkMesh!=NULL);
|
|
||||||
DebugStream2 << " " << vtkMesh->GetNumberOfCells() << std::endl;
|
|
||||||
vtkMesh->PrintSelf(DebugStream2,vtkIndent(6));
|
|
||||||
// Cache the mesh and return
|
|
||||||
// meshcache[cache_name] = mesh;
|
|
||||||
get_time(&stop);
|
|
||||||
DebugStream2 << " Time required: " << get_diff(start,stop,freq) << std::endl;
|
|
||||||
return vtkMesh;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtLBMFileFormat::GetVar
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Gets a scalar variable associated with this file. Although VTK has
|
|
||||||
// support for many different types, the best bet is vtkFloatArray, since
|
|
||||||
// that is supported everywhere through VisIt.
|
|
||||||
//
|
|
||||||
// Arguments:
|
|
||||||
// timestate The index of the timestate. If GetNTimesteps returned
|
|
||||||
// 'N' time steps, this is guaranteed to be between 0 and N-1.
|
|
||||||
// domain The index of the domain. If there are NDomains, this
|
|
||||||
// value is guaranteed to be between 0 and NDomains-1,
|
|
||||||
// regardless of block origin.
|
|
||||||
// varname The name of the variable requested.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
vtkDataArray *
|
|
||||||
avtLBMFileFormat::GetVar(int timestate, int domain, const char *meshvarname)
|
|
||||||
{
|
|
||||||
DebugStream1 << "avtLBMFileFormat::GetVar: " << meshvarname
|
|
||||||
<< "," << timestate << "," << domain << std::endl;
|
|
||||||
std::vector<std::string> tmp = IO::splitList(meshvarname,'/');
|
|
||||||
ASSERT(tmp.size()==2);
|
|
||||||
std::string varname = tmp[0];
|
|
||||||
std::string meshname = tmp[1];
|
|
||||||
const std::vector<IO::MeshDatabase> database = d_database[timestate];
|
|
||||||
const std::string timestep = d_timesteps[timestate];
|
|
||||||
std::shared_ptr<const IO::Variable> variable;
|
|
||||||
for (size_t i=0; i<database.size(); i++) {
|
|
||||||
if ( database[i].name==std::string(meshname) ) {
|
|
||||||
DebugStream2 << " calling getVar" << std::endl;
|
|
||||||
try {
|
|
||||||
variable = IO::getVariable(d_path,timestep,database[i],domain,varname);
|
|
||||||
} catch (const std::exception &err) {
|
|
||||||
DebugStream1 << " Caught errror calling getVar:" << std::endl;
|
|
||||||
DebugStream1 << err.what() << std::endl;
|
|
||||||
} catch (...) {
|
|
||||||
DebugStream1 << " Caught unknown errror calling getVar" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
if ( variable == NULL )
|
|
||||||
EXCEPTION1(InvalidVariableException, varname);
|
|
||||||
vtkDataArray* vtkVar = varToVTK(variable);
|
|
||||||
return vtkVar;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Method: avtLBMFileFormat::GetVectorVar
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Gets a vector variable associated with this file. Although VTK has
|
|
||||||
// support for many different types, the best bet is vtkFloatArray, since
|
|
||||||
// that is supported everywhere through VisIt.
|
|
||||||
//
|
|
||||||
// Arguments:
|
|
||||||
// timestate The index of the timestate. If GetNTimesteps returned
|
|
||||||
// 'N' time steps, this is guaranteed to be between 0 and N-1.
|
|
||||||
// domain The index of the domain. If there are NDomains, this
|
|
||||||
// value is guaranteed to be between 0 and NDomains-1,
|
|
||||||
// regardless of block origin.
|
|
||||||
// varname The name of the variable requested.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
vtkDataArray *
|
|
||||||
avtLBMFileFormat::GetVectorVar(int timestate, int domain, const char *varname)
|
|
||||||
{
|
|
||||||
cerr << "avtLBMFileFormat::GetVectorVar - " << varname
|
|
||||||
<< "," << timestate << "," << domain << std::endl;
|
|
||||||
DebugStream1 << "avtLBMFileFormat::GetVectorVar" << std::endl;
|
|
||||||
EXCEPTION1(InvalidVariableException, varname);
|
|
||||||
return NULL;
|
|
||||||
|
|
||||||
//
|
|
||||||
// If you have a file format where variables don't apply (for example a
|
|
||||||
// strictly polygonal format like the STL (Stereo Lithography) format,
|
|
||||||
// then uncomment the code below.
|
|
||||||
//
|
|
||||||
// EXCEPTION1(InvalidVariableException, varname);
|
|
||||||
//
|
|
||||||
|
|
||||||
//
|
|
||||||
// If you do have a vector variable, here is some code that may be helpful.
|
|
||||||
//
|
|
||||||
// int ncomps = YYY; // This is the rank of the vector - typically 2 or 3.
|
|
||||||
// int ntuples = XXX; // this is the number of entries in the variable.
|
|
||||||
// vtkFloatArray *rv = vtkFloatArray::New();
|
|
||||||
// int ucomps = (ncomps == 2 ? 3 : ncomps);
|
|
||||||
// rv->SetNumberOfComponents(ucomps);
|
|
||||||
// rv->SetNumberOfTuples(ntuples);
|
|
||||||
// float *one_entry = new float[ucomps];
|
|
||||||
// for (int i = 0 ; i < ntuples ; i++)
|
|
||||||
// {
|
|
||||||
// int j;
|
|
||||||
// for (j = 0 ; j < ncomps ; j++)
|
|
||||||
// one_entry[j] = ...
|
|
||||||
// for (j = ncomps ; j < ucomps ; j++)
|
|
||||||
// one_entry[j] = 0.;
|
|
||||||
// rv->SetTuple(i, one_entry);
|
|
||||||
// }
|
|
||||||
//
|
|
||||||
// delete [] one_entry;
|
|
||||||
// return rv;
|
|
||||||
//
|
|
||||||
}
|
|
||||||
|
|
||||||
@ -1,115 +0,0 @@
|
|||||||
/*****************************************************************************
|
|
||||||
*
|
|
||||||
* Copyright (c) 2000 - 2013, Lawrence Livermore National Security, LLC
|
|
||||||
* Produced at the Lawrence Livermore National Laboratory
|
|
||||||
* LLNL-CODE-442911
|
|
||||||
* All rights reserved.
|
|
||||||
*
|
|
||||||
* This file is part of VisIt. For details, see https://visit.llnl.gov/. The
|
|
||||||
* full copyright notice is contained in the file COPYRIGHT located at the root
|
|
||||||
* of the VisIt distribution or at http://www.llnl.gov/visit/copyright.html.
|
|
||||||
*
|
|
||||||
* Redistribution and use in source and binary forms, with or without
|
|
||||||
* modification, are permitted provided that the following conditions are met:
|
|
||||||
*
|
|
||||||
* - Redistributions of source code must retain the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer below.
|
|
||||||
* - Redistributions in binary form must reproduce the above copyright notice,
|
|
||||||
* this list of conditions and the disclaimer (as noted below) in the
|
|
||||||
* documentation and/or other materials provided with the distribution.
|
|
||||||
* - Neither the name of the LLNS/LLNL nor the names of its contributors may
|
|
||||||
* be used to endorse or promote products derived from this software without
|
|
||||||
* specific prior written permission.
|
|
||||||
*
|
|
||||||
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
|
|
||||||
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
|
|
||||||
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
|
|
||||||
* ARE DISCLAIMED. IN NO EVENT SHALL LAWRENCE LIVERMORE NATIONAL SECURITY,
|
|
||||||
* LLC, THE U.S. DEPARTMENT OF ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY
|
|
||||||
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
|
|
||||||
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
|
|
||||||
* SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
|
|
||||||
* CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
|
|
||||||
* LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
|
|
||||||
* OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
|
|
||||||
* DAMAGE.
|
|
||||||
*
|
|
||||||
*****************************************************************************/
|
|
||||||
|
|
||||||
// ************************************************************************* //
|
|
||||||
// avtLBMFileFormat.h //
|
|
||||||
// ************************************************************************* //
|
|
||||||
|
|
||||||
#ifndef AVT_LBM_FILE_FORMAT_H
|
|
||||||
#define AVT_LBM_FILE_FORMAT_H
|
|
||||||
|
|
||||||
#include <vtkObjectBase.h>
|
|
||||||
|
|
||||||
#include <avtMTMDFileFormat.h>
|
|
||||||
|
|
||||||
#include <vector>
|
|
||||||
#include <map>
|
|
||||||
#include "IO/MeshDatabase.h"
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
// ****************************************************************************
|
|
||||||
// Class: avtLBMFileFormat
|
|
||||||
//
|
|
||||||
// Purpose:
|
|
||||||
// Reads in LBM files as a plugin to VisIt.
|
|
||||||
//
|
|
||||||
// Programmer: mbt -- generated by xml2avt
|
|
||||||
// Creation: Wed Jul 9 10:59:08 PDT 2014
|
|
||||||
//
|
|
||||||
// ****************************************************************************
|
|
||||||
|
|
||||||
class avtLBMFileFormat : public avtMTMDFileFormat
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
avtLBMFileFormat(const char *);
|
|
||||||
virtual ~avtLBMFileFormat() {;};
|
|
||||||
|
|
||||||
//
|
|
||||||
// This is used to return unconvention data -- ranging from material
|
|
||||||
// information to information about block connectivity.
|
|
||||||
//
|
|
||||||
// virtual void *GetAuxiliaryData(const char *var, int timestep,
|
|
||||||
// int domain, const char *type, void *args,
|
|
||||||
// DestructorFunction &);
|
|
||||||
//
|
|
||||||
|
|
||||||
//
|
|
||||||
// If you know the times and cycle numbers, overload this function.
|
|
||||||
// Otherwise, VisIt will make up some reasonable ones for you.
|
|
||||||
//
|
|
||||||
// virtual void GetCycles(std::vector<int> &);
|
|
||||||
// virtual void GetTimes(std::vector<double> &);
|
|
||||||
//
|
|
||||||
|
|
||||||
virtual int GetNTimesteps(void);
|
|
||||||
|
|
||||||
virtual const char *GetType(void) { return "LBM"; };
|
|
||||||
virtual void FreeUpResources(void);
|
|
||||||
|
|
||||||
virtual vtkDataSet *GetMesh(int, int, const char *);
|
|
||||||
virtual vtkDataArray *GetVar(int, int, const char *);
|
|
||||||
virtual vtkDataArray *GetVectorVar(int, int, const char *);
|
|
||||||
|
|
||||||
protected:
|
|
||||||
|
|
||||||
// Populate the databes
|
|
||||||
virtual void PopulateDatabaseMetaData(avtDatabaseMetaData*, int);
|
|
||||||
|
|
||||||
// Helper typedefs
|
|
||||||
typedef std::pair<std::string,int> mesh_key;
|
|
||||||
|
|
||||||
// DATA MEMBERS
|
|
||||||
std::string d_path;
|
|
||||||
std::vector<std::string> d_timesteps;
|
|
||||||
std::vector<std::vector<IO::MeshDatabase> > d_database;
|
|
||||||
std::map<std::string,vtkObjectBase*> d_meshcache;
|
|
||||||
};
|
|
||||||
|
|
||||||
|
|
||||||
#endif
|
|
||||||
@ -1,10 +0,0 @@
|
|||||||
# visit -debug 1 -valgrind engine_ser -cli -s /projects/JamesClure/LBPM-WIA/visit/testVisit.py
|
|
||||||
|
|
||||||
|
|
||||||
OpenDatabase("localhost:/projects/JamesClure/build/debug/tests/summary.LBM", 0)
|
|
||||||
#AddPlot("Mesh", "pointmesh", 1, 1)
|
|
||||||
AddPlot("Mesh", "trilist", 1, 1)
|
|
||||||
DrawPlots()
|
|
||||||
#quit()
|
|
||||||
|
|
||||||
|
|
||||||
@ -1,223 +0,0 @@
|
|||||||
// vtk headers
|
|
||||||
#include <vtkFloatArray.h>
|
|
||||||
#include <vtkRectilinearGrid.h>
|
|
||||||
#include <vtkStructuredGrid.h>
|
|
||||||
#include <vtkUnstructuredGrid.h>
|
|
||||||
#include <vtkPointSet.h>
|
|
||||||
#include <vtkCellType.h>
|
|
||||||
#include <vtkPolyData.h>
|
|
||||||
#include <vtkCellArray.h>
|
|
||||||
#include <vtkDoubleArray.h>
|
|
||||||
#include <vtkStructuredGrid.h>
|
|
||||||
|
|
||||||
|
|
||||||
// LBPM headers
|
|
||||||
#include "IO/Mesh.h"
|
|
||||||
#include "IO/MeshDatabase.h"
|
|
||||||
|
|
||||||
|
|
||||||
extern std::ostream DebugStream1;
|
|
||||||
extern std::ostream DebugStream2;
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a point array to vtkFloatArray
|
|
||||||
inline vtkFloatArray* pointToVTK( const std::vector<Point>& points )
|
|
||||||
{
|
|
||||||
vtkFloatArray *coords = vtkFloatArray::New();
|
|
||||||
coords->SetNumberOfComponents(3);
|
|
||||||
coords->SetNumberOfTuples(points.size());
|
|
||||||
for (size_t i=0; i<points.size(); i++)
|
|
||||||
coords->SetTuple3(i,points[i].x,points[i].y,points[i].z);
|
|
||||||
return coords;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Return the mesh type
|
|
||||||
inline avtMeshType vtkMeshType( IO::MeshType meshType )
|
|
||||||
{
|
|
||||||
avtMeshType vtkType = AVT_UNKNOWN_MESH;
|
|
||||||
if ( meshType==IO::PointMesh )
|
|
||||||
vtkType = AVT_POINT_MESH;
|
|
||||||
else if ( meshType==IO::SurfaceMesh )
|
|
||||||
vtkType = AVT_SURFACE_MESH;
|
|
||||||
else if ( meshType==IO::VolumeMesh )
|
|
||||||
vtkType = AVT_RECTILINEAR_MESH;
|
|
||||||
return vtkType;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Return the topological dimension
|
|
||||||
inline int vtkTopDim( IO::MeshType meshType )
|
|
||||||
{
|
|
||||||
int dim = -1;
|
|
||||||
if ( meshType==IO::PointMesh )
|
|
||||||
dim = 1;
|
|
||||||
else if ( meshType==IO::SurfaceMesh )
|
|
||||||
dim = 2;
|
|
||||||
else if ( meshType==IO::VolumeMesh )
|
|
||||||
dim = 3;
|
|
||||||
return dim;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a PointList to vtkDataSet
|
|
||||||
inline vtkDataSet* PointListToVTK( std::shared_ptr<const IO::PointList> mesh )
|
|
||||||
{
|
|
||||||
vtkFloatArray *coords = pointToVTK(mesh->points);
|
|
||||||
vtkPoints *points = vtkPoints::New(VTK_FLOAT);
|
|
||||||
points->SetData(coords);
|
|
||||||
points->ComputeBounds();
|
|
||||||
size_t N = mesh->points.size();
|
|
||||||
vtkPolyData *vtkMesh = vtkPolyData::New();
|
|
||||||
vtkMesh->SetPoints(points);
|
|
||||||
vtkMesh->Allocate(N);
|
|
||||||
for (int i=0; i<(int)N; i++) {
|
|
||||||
vtkIdType ids[1] = {i};
|
|
||||||
vtkMesh->InsertNextCell(VTK_VERTEX,1,ids);
|
|
||||||
}
|
|
||||||
// vtkMesh->BuildCells();
|
|
||||||
vtkMesh->ComputeBounds();
|
|
||||||
points->Delete();
|
|
||||||
coords->Delete();
|
|
||||||
return vtkMesh;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a TriMesh to vtkDataSet
|
|
||||||
inline vtkDataSet* TriMeshToVTK( std::shared_ptr<const IO::TriMesh> mesh )
|
|
||||||
{
|
|
||||||
vtkFloatArray *coords = pointToVTK(mesh->vertices->points);
|
|
||||||
ASSERT(coords!=NULL);
|
|
||||||
vtkPoints *points = vtkPoints::New(VTK_FLOAT);
|
|
||||||
points->SetData(coords);
|
|
||||||
points->ComputeBounds();
|
|
||||||
const std::vector<int>& A = mesh->A;
|
|
||||||
const std::vector<int>& B = mesh->B;
|
|
||||||
const std::vector<int>& C = mesh->C;
|
|
||||||
size_t N_tri = A.size();
|
|
||||||
vtkPolyData *vtkMesh = vtkPolyData::New();
|
|
||||||
vtkMesh->SetPoints(points);
|
|
||||||
vtkMesh->Allocate(N_tri);
|
|
||||||
for (size_t i=0; i<N_tri; i++) {
|
|
||||||
vtkIdType ids[3] = {A[i],B[i],C[i]};
|
|
||||||
vtkMesh->InsertNextCell(VTK_TRIANGLE,3,ids);
|
|
||||||
}
|
|
||||||
vtkMesh->BuildCells();
|
|
||||||
vtkMesh->ComputeBounds();
|
|
||||||
points->Delete();
|
|
||||||
coords->Delete();
|
|
||||||
return vtkMesh;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a TriList to vtkDataSet
|
|
||||||
inline vtkDataSet* TriListToVTK( std::shared_ptr<const IO::TriList> mesh )
|
|
||||||
{
|
|
||||||
std::vector<LBPM_Point> point_set(3*mesh->A.size());
|
|
||||||
for (size_t i=0; i<mesh->A.size(); i++) {
|
|
||||||
point_set[3*i+0] = mesh->A[i];
|
|
||||||
point_set[3*i+1] = mesh->B[i];
|
|
||||||
point_set[3*i+2] = mesh->C[i];
|
|
||||||
}
|
|
||||||
vtkFloatArray *coords = pointToVTK(point_set);
|
|
||||||
ASSERT(coords!=NULL);
|
|
||||||
vtkPoints *points = vtkPoints::New(VTK_FLOAT);
|
|
||||||
points->SetData(coords);
|
|
||||||
points->ComputeBounds();
|
|
||||||
size_t N_tri = mesh->A.size();
|
|
||||||
vtkPolyData *vtkMesh = vtkPolyData::New();
|
|
||||||
vtkMesh->SetPoints(points);
|
|
||||||
vtkMesh->Allocate(N_tri);
|
|
||||||
for (int i=0; i<(int)N_tri; i++) {
|
|
||||||
vtkIdType ids[3] = {3*i+0,3*i+1,3*i+2};
|
|
||||||
vtkMesh->InsertNextCell(VTK_TRIANGLE,3,ids);
|
|
||||||
}
|
|
||||||
vtkMesh->BuildCells();
|
|
||||||
vtkMesh->ComputeBounds();
|
|
||||||
points->Delete();
|
|
||||||
coords->Delete();
|
|
||||||
return vtkMesh;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a DomainMesh to vtkDataSet
|
|
||||||
inline vtkDataSet* DomainToVTK( std::shared_ptr<const IO::DomainMesh> mesh )
|
|
||||||
{
|
|
||||||
int nx = mesh->nx;
|
|
||||||
int ny = mesh->ny;
|
|
||||||
int nz = mesh->nz;
|
|
||||||
if ( nx==0 || ny==0 || nz==0 ) {
|
|
||||||
DebugStream::Stream1() << " Domain mesh is empty" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
RankInfoStruct rank_data(mesh->rank,mesh->nprocx,mesh->nprocy,mesh->nprocz);
|
|
||||||
vtkFloatArray *x = vtkFloatArray::New();
|
|
||||||
vtkFloatArray *y = vtkFloatArray::New();
|
|
||||||
vtkFloatArray *z = vtkFloatArray::New();
|
|
||||||
for(int i=0; i<=nx; i++)
|
|
||||||
x->InsertNextValue(static_cast<double>(nx*rank_data.ix+i)/static_cast<double>(nx*mesh->nprocx));
|
|
||||||
for(int j=0; j<=ny; j++)
|
|
||||||
y->InsertNextValue(static_cast<double>(ny*rank_data.jy+j)/static_cast<double>(ny*mesh->nprocy));
|
|
||||||
for(int k=0; k<=nz; k++)
|
|
||||||
z->InsertNextValue(static_cast<double>(nz*rank_data.kz+k)/static_cast<double>(nz*mesh->nprocz));
|
|
||||||
vtkRectilinearGrid *vtkMesh = vtkRectilinearGrid::New();
|
|
||||||
vtkMesh->SetDimensions(nx+1,ny+1,nz+1);
|
|
||||||
vtkMesh->SetXCoordinates(x);
|
|
||||||
vtkMesh->SetYCoordinates(y);
|
|
||||||
vtkMesh->SetZCoordinates(z);
|
|
||||||
vtkMesh->ComputeBounds();
|
|
||||||
x->Delete();
|
|
||||||
y->Delete();
|
|
||||||
z->Delete();
|
|
||||||
return vtkMesh;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a mesh to vtkDataSet
|
|
||||||
inline vtkDataSet* meshToVTK( std::shared_ptr<const IO::Mesh> mesh )
|
|
||||||
{
|
|
||||||
if ( mesh.get() == NULL ){
|
|
||||||
DebugStream::Stream1() << " Mesh is NULL" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
vtkDataSet* mesh2 = NULL;
|
|
||||||
const std::string className = mesh->className();
|
|
||||||
if ( className == "PointList" ) {
|
|
||||||
// We are dealing with a point mesh
|
|
||||||
mesh2 = PointListToVTK( std::dynamic_pointer_cast<const IO::PointList>(mesh) );
|
|
||||||
DebugStream1 << " Point mesh created" << std::endl;
|
|
||||||
} else if ( className == "TriMesh" ) {
|
|
||||||
mesh2 = TriMeshToVTK( std::dynamic_pointer_cast<const IO::TriMesh>(mesh) );
|
|
||||||
DebugStream1 << " Surface mesh created" << std::endl;
|
|
||||||
} else if ( className == "TriList" ) {
|
|
||||||
mesh2 = TriListToVTK( std::dynamic_pointer_cast<const IO::TriList>(mesh) );
|
|
||||||
DebugStream1 << " Surface mesh created" << std::endl;
|
|
||||||
} else if ( className == "DomainMesh" ) {
|
|
||||||
mesh2 = DomainToVTK( std::dynamic_pointer_cast<const IO::DomainMesh>(mesh) );
|
|
||||||
DebugStream1 << " Volume mesh created" << std::endl;
|
|
||||||
} else {
|
|
||||||
//DebugStream1 << " Error, unknown mesh type" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
return mesh2;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// Convert a variable to vtkDataSet
|
|
||||||
inline vtkDataArray* varToVTK( std::shared_ptr<const IO::Variable> var )
|
|
||||||
{
|
|
||||||
vtkFloatArray* var2 = NULL;
|
|
||||||
if ( var->dim==1 ) {
|
|
||||||
// Scalar variable
|
|
||||||
var2 = vtkFloatArray::New();
|
|
||||||
var2->SetNumberOfTuples(var->data.length());
|
|
||||||
for (size_t i=0; i<var->data.length(); i++)
|
|
||||||
var2->SetTuple1(i,var->data(i));
|
|
||||||
} else {
|
|
||||||
DebugStream::Stream1() << " Error, variable not yet supported" << std::endl;
|
|
||||||
return NULL;
|
|
||||||
}
|
|
||||||
return var2;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
Loading…
Reference in New Issue
Block a user