OilfieldToolsNet/LBPM
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debugging uCT filter

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This commit is contained in:
James E McClure 2018-06-05 17:40:44 -04:00
parent 9ded1408fe
commit 4d5314ae2a
1 changed files with 24 additions and 6 deletions
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30
tests/lbpm_uCT_pp.cpp
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@ -20,7 +20,6 @@
#include "IO/Writer.h" #include "IO/Writer.h"
#include "IO/netcdf.h" #include "IO/netcdf.h"
#include "analysis/analysis.h" #include "analysis/analysis.h"
#include "analysis/eikonal.h"
#include "analysis/filters.h" #include "analysis/filters.h"
#include "analysis/uCT.h" #include "analysis/uCT.h"
@ -48,14 +47,34 @@ int main(int argc, char **argv)
std::string filename = std::string(argv[1]); std::string filename = std::string(argv[1]);
if ( rank == 0 ) if ( rank == 0 )
printf("Input data file: %s\n",filename.c_str()); printf("Input data file: %s\n",filename.c_str());
auto db = std::make_shared<Database>( filename );
auto domain_db = db->getDatabase( "Domain" );
auto uct_db = db->getDatabase( "uCT" );
auto analysis_db = db->getDatabase( "Analysis" );
// Read domain values
auto L = domain_db->getVector<double>( "L" );
auto size = domain_db->getVector<int>( "n" );
auto nproc = domain_db->getVector<int>( "nproc" );
int BoundaryCondition = domain_db->getScalar<int>( "BC" );
int Nx = size[0];
int Ny = size[1];
int Nz = size[2];
double Lx = L[0];
double Ly = L[1];
double Lz = L[2];
int nprocx = nproc[0];
int nprocy = nproc[1];
int nprocz = nproc[2];
//....................................................................... //.......................................................................
// Reading the domain information file // Reading the domain information file
//....................................................................... //.......................................................................
int nprocx, nprocy, nprocz, nx, ny, nz, nspheres; std::shared_ptr<Domain> Dm (new Domain(domain_db));
double Lx, Ly, Lz; for (int i=0; i<Dm->Nx*Dm->Ny*Dm->Nz; i++) Dm->id[i] = 1;
read_domain( rank, nprocs, comm, nprocx, nprocy, nprocz, nx, ny, nz, nspheres, Lx, Ly, Lz ); Dm->CommInit();
int BC=0; std::shared_ptr<TwoPhase> Averages( new TwoPhase(Dm) );
// Check that the number of processors >= the number of ranks // Check that the number of processors >= the number of ranks
@ -122,7 +141,6 @@ int main(int argc, char **argv)
fillChar[i].reset(new fillHalo<char>(Dm[i]->Comm,Dm[i]->rank_info,Nx[i],Ny[i],Nz[i],1,1,1,0,1) ); fillChar[i].reset(new fillHalo<char>(Dm[i]->Comm,Dm[i]->rank_info,Nx[i],Ny[i],Nz[i],1,1,1,0,1) );
} }
// Read the subvolume of interest on each processor // Read the subvolume of interest on each processor
PROFILE_START("ReadVolume"); PROFILE_START("ReadVolume");
int fid = netcdf::open(filename,netcdf::READ); int fid = netcdf::open(filename,netcdf::READ);