OilfieldToolsNet/LBPM
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updating membrane communication structure

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This commit is contained in:
James McClure
2022-05-11 23:37:18 -04:00
parent 2894b740d0
commit 7c790e8802
6 changed files with 183 additions and 774 deletions
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4
models/IonModel.cpp
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@@ -706,7 +706,7 @@ void ScaLBL_IonModel::SetMembrane() {
/* set distance based on labels inside the membrane (all other labels will be outside) */
auto MembraneLabels = membrane_db->getVector<int>("MembraneLabels");
IonMembrane = std::shared_ptr<Membrane>(new Membrane(Dm, NeighborList, Np));
IonMembrane = std::shared_ptr<Membrane>(new Membrane(ScaLBL_Comm, NeighborList, Np));
size_t NLABELS = MembraneLabels.size();
signed char LABEL = 0;
double *label_count;
@@ -758,7 +758,7 @@ void ScaLBL_IonModel::SetMembrane() {
CalcDist(MembraneDistance, membrane_id, *Dm);
/* create the membrane data structure */
if (rank==0) printf("Creating membrane data structure...\n");
MembraneCount = IonMembrane->Create(Dm, MembraneDistance, Map);
MembraneCount = IonMembrane->Create(MembraneDistance, Map);
// clean up
delete [] label_count;