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adding silo vis capabilities to electrochem

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This commit is contained in:
James McClure
2020-12-29 14:04:43 -05:00
parent 879f8637bf
commit 9826ef5624
13 changed files with 176 additions and 79 deletions
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32
models/PoissonSolver.cpp
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@@ -587,38 +587,26 @@ void ScaLBL_Poisson::getElectricPotential_debug(int timestep){
fclose(OUTFILE);
}
void ScaLBL_Poisson::getElectricPotential(int timestep){
void ScaLBL_Poisson::getElectricPotential(DoubleArray &ReturnValues){
//This function wirte out the data in a normal layout (by aggregating all decomposed domains)
DoubleArray PhaseField(Nx,Ny,Nz);
//ScaLBL_Comm->RegularLayout(Map,Psi,PhaseField);
ScaLBL_CopyToHost(PhaseField.data(),Psi,sizeof(double)*Nx*Ny*Nz);
ScaLBL_DeviceBarrier(); MPI_Barrier(comm);
sprintf(OutputFilename,"Electric_Potential_Time_%i.raw",timestep);
Mask->AggregateLabels(OutputFilename,PhaseField);
ScaLBL_CopyToHost(ReturnValues.data(),Psi,sizeof(double)*Nx*Ny*Nz);
}
void ScaLBL_Poisson::getElectricField(int timestep){
void ScaLBL_Poisson::getElectricField(DoubleArray &Values_x, DoubleArray &Values_y, DoubleArray &Values_z){
DoubleArray PhaseField(Nx,Ny,Nz);
ScaLBL_Comm->RegularLayout(Map,&ElectricField[0*Np],PhaseField);
ElectricField_LB_to_Phys(PhaseField);
ScaLBL_Comm->RegularLayout(Map,&ElectricField[0*Np],Values_x);
ElectricField_LB_to_Phys(Values_x);
ScaLBL_DeviceBarrier(); MPI_Barrier(comm);
sprintf(OutputFilename,"ElectricField_X_Time_%i.raw",timestep);
Mask->AggregateLabels(OutputFilename,PhaseField);
ScaLBL_Comm->RegularLayout(Map,&ElectricField[1*Np],PhaseField);
ElectricField_LB_to_Phys(PhaseField);
ScaLBL_Comm->RegularLayout(Map,&ElectricField[1*Np],Values_y);
ElectricField_LB_to_Phys(Values_y);
ScaLBL_DeviceBarrier(); MPI_Barrier(comm);
sprintf(OutputFilename,"ElectricField_Y_Time_%i.raw",timestep);
Mask->AggregateLabels(OutputFilename,PhaseField);
ScaLBL_Comm->RegularLayout(Map,&ElectricField[2*Np],PhaseField);
ElectricField_LB_to_Phys(PhaseField);
ScaLBL_Comm->RegularLayout(Map,&ElectricField[2*Np],Values_z);
ElectricField_LB_to_Phys(Values_z);
ScaLBL_DeviceBarrier(); MPI_Barrier(comm);
sprintf(OutputFilename,"ElectricField_Z_Time_%i.raw",timestep);
Mask->AggregateLabels(OutputFilename,PhaseField);
}
void ScaLBL_Poisson::getElectricField_debug(int timestep){