Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA
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commit
d1dad8b9a4
@ -24,7 +24,8 @@ struct Domain{
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Domain(int nx, int ny, int nz, int rnk, int npx, int npy, int npz,
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double lx, double ly, double lz, int BC){
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Volume = nx*ny*nx*npx*npy*npz*1.0;
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Volume = nx*ny*nx*npx*npy*npz*1.0;
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Nx = nx+2; Ny = ny+2; Nz = nz+2;
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Lx = lx, Ly = ly, Lz = lz;
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rank = rnk;
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@ -118,17 +118,34 @@ int main(int argc, char **argv)
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//.......................................................................
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int nprocx, nprocy, nprocz, nx, ny, nz, nspheres;
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double Lx, Ly, Lz;
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ifstream domain("Domain.in");
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domain >> nprocx;
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domain >> nprocy;
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domain >> nprocz;
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domain >> nx;
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domain >> ny;
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domain >> nz;
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domain >> nspheres;
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domain >> Lx;
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domain >> Ly;
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domain >> Lz;
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if (rank==0){
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ifstream domain("Domain.in");
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domain >> nprocx;
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domain >> nprocy;
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domain >> nprocz;
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domain >> nx;
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domain >> ny;
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domain >> nz;
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domain >> nspheres;
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domain >> Lx;
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domain >> Ly;
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domain >> Lz;
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}
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MPI_Barrier(MPI_COMM_WORLD);
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// Computational domain
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MPI_Bcast(&nx,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&ny,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&nz,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&nprocx,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&nprocy,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&nprocz,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&nspheres,1,MPI_INT,0,MPI_COMM_WORLD);
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MPI_Bcast(&Lx,1,MPI_DOUBLE,0,MPI_COMM_WORLD);
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MPI_Bcast(&Ly,1,MPI_DOUBLE,0,MPI_COMM_WORLD);
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MPI_Bcast(&Lz,1,MPI_DOUBLE,0,MPI_COMM_WORLD);
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//.................................................
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MPI_Barrier(MPI_COMM_WORLD);
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// Check that the number of processors >= the number of ranks
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if ( rank==0 ) {
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@ -182,6 +199,14 @@ int main(int argc, char **argv)
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fclose(BLOBLOCAL);
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printf("Wrote BlobLabel.%05i \n",rank);
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sprintf(LocalRankString,"%05d",rank);
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// sprintf(LocalRankFilename,"%s%s","ID.",LocalRankString);
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// WriteLocalSolidID(LocalRankFilename, id, N);
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sprintf(LocalRankFilename,"%s%s","SignDist.",LocalRankString);
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ReadBinaryFile(LocalRankFilename, Averages.SDs.get(), N);
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MPI_Barrier(MPI_COMM_WORLD);
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if (rank == 0) cout << "Domain set." << endl;
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//.......................................................................
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//copies of data needed to perform checkpointing from cpu
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double *Den, *DistEven, *DistOdd;
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@ -266,9 +291,8 @@ int main(int argc, char **argv)
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if (rank==0) printf("Porosity = %f \n",porosity);
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Dm.CommInit(MPI_COMM_WORLD);
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// nblobs = ComputeGlobalBlobIDs(nx,ny,nz,rank_info,
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// Averages.Phase,Averages.SDs,vF,vS,Averages.BlobLabel);
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// nblobs = ComputeGlobalBlobIDs(nx,ny,nz,rank_info,
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// Averages.Phase,Averages.SDs,vF,vS,Averages.BlobLabel);
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// if ( rank==0 ) { printf("Identified %i blobs\n",nblobs); }
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for (int k=0; k<nz+2; k++){
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