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shift swc data

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This commit is contained in:
James McClure 2022-05-16 21:43:53 -04:00
parent 175e7bd00b
commit e818ade293
1 changed files with 20 additions and 0 deletions
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20
common/Domain.cpp
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@ -89,6 +89,26 @@ void Domain::read_swc(const std::string &Filename) {
}
cout << " Number of lines extracted is: " << count << endl;
INSIST(count == number_of_lines, "Problem reading swc file!");
double min_cx = List_cx[0]-List_rad[0];
double min_cy = List_cy[0]-List_rad[0];
double min_cz = List_cz[0]-List_rad[0];
for (count=1; count<number_of_lines; count++){
double value_x = List_cx[count]-List_rad[count];
double value_y = List_cy[count]-List_rad[count];
double value_z = List_cz[count]-List_rad[count];
if (value_x < min_cx) min_cx = value_x;
if (value_y < min_cy) min_cy = value_y;
if (value_z < min_cz) min_cz = value_z;
}
/* shift the swc data */
printf(" shift swc data by %f, %f, %f \n",min_cx,min_cy, min_cz);
for (count=0; count<number_of_lines; count++){
List_cx[count] -= min_cx;
List_cy[count] -= min_cy;
List_cz[count] -= min_cz;
}
}
/* everybody gets the swc file */
Comm.bcast(List_cx,number_of_lines,0);