update examples

example/Bubble/input.db

@@ -47,4 +47,8 @@ Analysis {
 }
 
 Visualization {
-}
+}
+
+FlowAdaptor {
+
+}

example/MicroModel/BlobSize.in

@@ -1,2 +0,0 @@
-1
-32 32 32

example/MicroModel/Color.in

@@ -1,6 +0,0 @@
-0.7
-1.0e-2 0.95 -1.0
-0.7
-0.0 0.0 0.0
-0 1 1.04 0.96
-900000 20000 1e-5

example/MicroModel/DiscPack.in

@@ -1,144 +0,0 @@
-33.13248649 29.93643243 15.41628378
-75.07072973 26.66563068 16.99835135
-118.9166622 26.51018919 13.54747297
-155.9032432 26.54839365 18.37214865
-194.4647297 25.64848784 13.23047838
-236.4466216 27.04415726 18.86951351
-276.9660811 27.18572081 18.66178378
-316.6336486 27.16016042 17.04760811
-360.6031081 29.63283514 14.62525676
-400.4937838 26.33180541 15.91213514
-436.6832432 29.38145946 15.30281081
-479.5852703 27.09887028 18.76375676
-15.17307297 69.60128378 14.82944595
-53.0137973 64.87014865 16.21706757
-94.52747297 68.84901351 17.6057027
-135.5813919 65.70918919 16.92474324
-173.2494595 69.96463514 14.05135135
-215.6589189 68.16136486 17.94732432
-259.9767568 70.38693243 14.80982432
-297.0702703 67.83155405 14.68744595
-336.5431081 67.57271622 17.27831081
-378.3740541 67.72916216 18.13277027
-419.2805405 66.79117568 17.42808108
-455.1844595 72.06137838 13.27178784
-33.72422973 108.8409189 17.24389189
-74.43232432 108.0137838 18.75
-114.1253784 106.4523919 17.1622027
-153.882027 112.3773514 13.02102703
-199.0522973 111.1353243 15.15556757
-241.1697297 107.2128378 13.80640541
-277.315 108.4926486 18.42555405
-320.4716216 106.1688919 15.76947297
-354.8572973 105.7547973 13.44669865
-400.797973 110.3642297 16.28766216
-439.5955405 107.9637838 18.33110811
-482.8833784 107.3503784 13.76293243
-10.30476351 149.3496351 15.64486486
-55.28555405 147.8185946 16.92521622
-95.24567568 149.0092432 17.58089189
-131.8110405 150.626527 13.8865
-179.3263514 146.4626757 14.22206757
-216.0708108 152.3747568 14.82614865
-261.7548649 147.6711757 13.01481622
-299.3959459 147.4904324 13.76047297
-339.8782432 149.7220541 16.66758108
-373.3464865 152.5632297 13.45467297
-417.9712162 147.855973 17.36840541
-458.4025676 144.5771622 14.61705405
-33.32618919 191.2175676 12.4216527
-74.30910811 189.2091892 18.52312162
-114.6439054 190.2966216 16.95763514
-158.2144595 191.8867568 15.55116216
-194.6536486 189.0091892 15.71814865
-237.9637838 189.242027 17.27986486
-271.4318919 186.4898649 13.0739527
-317.7631081 188.4841892 16.13393243
-358.1116216 191.2745946 14.83137838
-398.7190541 189.4286486 18.13921622
-439.5593243 189.8759459 16.8382973
-482.1985135 194.4328378 12.19701081
-13.90195446 229.4845946 18.36889189
-55.69509459 226.9613514 16.02147297
-96.98522973 232.4032432 14.46966216
-137.4593243 227.1902703 13.4368527
-174.2690541 228.4505405 16.73159459
-216.2844595 229.237027 18.25581081
-259.6358108 233.6717568 12.89051757
-298.1172973 229.1837838 15.79105405
-338.9263514 229.9989189 16.83474324
-378.4617568 230.0036486 18.49422973
-418.9406757 228.4566216 13.19394865
-459.3066216 230.6732432 17.26921622
-35.56972973 273.1122973 15.46828378
-72.91724324 272.0410811 16.95751351
-114.3243243 273.7995946 15.17266216
-158.1804054 267.382973 13.8992027
-194.7917568 269.7763514 17.70321622
-236.57 271.7548649 12.18126081
-272.412973 266.6922973 13.18252973
-317.5945946 270.2414865 18.8062027
-359.0810811 268.9272973 17.10451351
-401.6145946 268.1164865 13.57114865
-434.9897297 265.9721622 12.38897297
-479.9452703 270.4847297 12.98088378
-13.27824108 310.6754054 18.66364865
-53.25386486 312.0385135 14.46228378
-92.49813514 308.3451351 15.20474324
-136.1003514 309.7871622 17.76025676
-174.5641892 311.4295946 13.06244865
-219.4805405 310.8893243 14.40940541
-258.0839189 310.0159459 17.41775676
-297.6322973 310.9914865 18.51806757
-337.9448649 310.7555405 17.73358108
-374.9710811 312.2205405 14.25995946
-422.8451351 314.0112162 14.40621622
-459.8067568 311.2154054 13.47336486
-34.99885135 351.7381081 17.47081081
-75.33945946 351.677027 15.52572973
-114.8586486 351.3459459 18.89374324
-155.7139189 350.8706757 18.07736486
-191.6158108 352.282973 12.90032838
-234.2532432 350.5644595 14.65478378
-275.127027 350.5708108 16.79345946
-317.652973 352.3060811 16.43624324
-363.8067568 347.8472973 12.7394473
-401.5713514 349.2537838 14.74306757
-436.0778378 349.6571622 14.30860811
-482.565 353.0252703 15.15274324
-10.92297703 391.8589189 15.69475676
-52.44290541 394.7612162 15.2132027
-93.64185135 390.0597297 15.0062027
-139.127527 389.3374324 14.73910811
-175.5394595 391.7282432 18.06841892
-216.4606757 392.4894595 17.91210811
-251.7971622 390.4447297 12.52764324
-298.7958108 393.1183784 16.58391892
-336.7648649 392.7705405 16.06710811
-379.9774324 392.8135135 16.87058108
-417.1693243 392.1031081 16.41077027
-459.4625676 391.9014865 18.88939189
-32.60527027 431.387973 13.79572973
-73.08481081 428.7002703 14.2487973
-114.5770541 432.5933784 17.63783784
-156.0283784 432.7117568 17.82533784
-198.9813514 432.5832432 14.1537027
-237.5352703 434.3167568 15.54622973
-277.7677027 433.0071622 15.02437838
-316.0105405 434.197973 16.34566216
-359.23 437.6654054 13.07579189
-401.887027 430.8952703 15.38594595
-442.0587838 434.6848649 12.87081892
-481.2160811 438.0641892 13.1349027
-13.43983284 473.0802703 17.79305405
-58.56352703 468.0102703 12.698
-95.47004054 472.9767568 16.32575676
-134.9401622 472.807027 18.70305405
-173.3897297 469.9112162 15.53236486
-216.2163514 473.1051351 18.61358108
-256.3348649 474.0559459 14.83377027
-294.8790541 471.1768919 14.53377027
-339.6306757 472.1563514 16.27194595
-377.4156757 471.6939189 17.32056757
-423.6267568 474.1678378 12.76715541
-459.5241892 471.4267568 16.65775676

example/MicroModel/Domain.in

@@ -1,3 +0,0 @@
-1 1 1
-10 400 400
-20.0 500.0 500.0

example/MicroModel/GenerateCases.sh

@@ -0,0 +1,47 @@
+#!/bin/bash
+
+
+tau1=1.18
+tau2=0.7
+alpha=0.005
+Q="1.179757e-08 1.179757e-07 1.179757e-06"
+
+#Cases for drainage
+DrainWet="0.79 0.47 0.0" 
+
+# Cases for imbibition
+ImbWet="0.92 0.47" 
+
+for q in $Q; do 
+  echo $q;
+  flux=$(echo $q | sed 's/1.179757e-08/0.002/g')
+  flux=$(echo $flux | sed 's/1.179757e-07/0.02/g')
+  flux=$(echo $flux | sed 's/1.179757e-06/0.2/g')
+
+   for i in $DrainWet; do
+       NAME="Juanes_drain_Q"$flux"_wet"$i
+       echo $NAME
+       mkdir $NAME
+       echo "$tau1 $tau2" > $NAME/Color.in
+       echo "$alpha 0.95 $i" >> $NAME/Color.in
+       echo "0.0" >> $NAME/Color.in
+       echo "0.0 0.0 0.0" >> $NAME/Color.in
+       echo "0 4 $q 0.0" >> $NAME/Color.in
+       echo "5000000 25000 1e-5" >> $NAME/Color.in
+       echo "1000" >> $NAME/Color.in
+   done
+
+   for i in $ImbWet; do
+       NAME="Juanes_imb_Q"$flux"_wet"$i
+       echo $NAME
+       mkdir $NAME
+       echo "$tau1 $tau2" > $NAME/Color.in
+       echo "$alpha 0.95 $i" >> $NAME/Color.in
+       echo "0.0" >> $NAME/Color.in
+       echo "0.0 0.0 0.0" >> $NAME/Color.in
+       echo "0 4 $q 0.0" >> $NAME/Color.in
+       echo "5000000 25000 1e-5" >> $NAME/Color.in
+       echo "1000" >> $NAME/Color.in
+   done
+  
+done

example/MicroModel/ReadDiscPack.R

@@ -0,0 +1,21 @@
+require("ggplot2")
+
+Discs<-read.csv("FullMicromodel.discs",head=FALSE,sep=" ")
+
+colnames(Discs)<-c("cx","cy","radius")
+
+L=0.45
+
+# Extract some subset from the interior of the discs
+SubDiscs<-subset(Discs,Discs$cy>0.9-L)
+SubDiscs<-subset(SubDiscs,SubDiscs$cy<0.9+L)
+SubDiscs<-subset(SubDiscs,SubDiscs$cx>0.9-L)
+SubDiscs<-subset(SubDiscs,SubDiscs$cx<0.9+L)
+
+SubDiscs$cx<-SubDiscs$cx-0.9+L
+SubDiscs$cy<-SubDiscs$cy-0.9+L
+
+write.table(SubDiscs,file="DiscPack.in",quote=FALSE,row.names=FALSE,col.names=FALSE,sep=" ")
+
+ShowPlot<-ggplot(SubDiscs)+geom_circle(aes(x0=cx,y0=cy,r=radius))
+

example/Piston/input.db

@@ -37,4 +37,8 @@ Analysis {
 
 Visualization {
 
-}
+}
+
+FlowAdaptor {
+
+}

example/Plates/input.db

@@ -36,4 +36,8 @@ Analysis {
 }
 
 Visualization {
-}
+}
+
+FlowAdaptor {
+
+}