Commit Graph

1590 Commits

Author SHA1 Message Date
Mark Berrill
a00979dd4d Fixing bug with netcdf writer 2016-06-28 16:00:30 -04:00
Mark Berrill
f0aa2724bc Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-06-28 11:22:38 -04:00
Mark Berrill
0865f6c964 Adding additional template instantiations for netcdf 2016-06-28 11:22:27 -04:00
James E McClure
0fe1cda4a7 renamed masked filtering tool as lbpm_uCT_maskfilter 2016-06-28 09:12:20 -04:00
James E McClure
97d27fad31 Added lbpm_uCT_twophase.cpp 2016-06-28 09:06:52 -04:00
James E McClure
e0a1519608 Merge conflicts should be resolved 2016-06-27 14:00:39 -04:00
James E McClure
dc607718e6 committing lbpm_uCT_pp due to impending merge conflicts. Will resolve on next commit 2016-06-27 13:58:59 -04:00
Mark Berrill
1e8ca14d85 Refactoring lbpm_uCT_pp.cpp 2016-06-27 11:15:42 -04:00
Mark Berrill
7a6f35bd45 Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-06-27 10:11:16 -04:00
Mark Berrill
13cc325fa3 Adding netcdf writer 2016-06-27 10:10:46 -04:00
Mark Berrill
1dfbf34ecb Adding netcdf writer 2016-06-27 10:09:14 -04:00
James E McClure
a30cec72b0 lbpm_uCT_pp now works with MASK (specified internally) to crop with cylinder 2016-06-19 15:33:28 -04:00
James E McClure
d1774fed19 Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-06-19 15:04:59 -04:00
James E McClure
60e65e8cc0 fixed build 2016-06-19 15:04:43 -04:00
James E McClure
52cb49e85f updated lbpm_uCT_pp.cpp 2016-06-19 15:04:09 -04:00
James E McClure
d866da4356 Added distance mask to lbpm_uCT_pp 2016-06-19 13:31:29 -04:00
James E McClure
1efc44061c Revert "Added cylinder cropping to lbpm_uCT_pp"
This reverts commit 77064fea68.
2016-06-17 16:40:38 -04:00
James E McClure
77064fea68 Added cylinder cropping to lbpm_uCT_pp 2016-06-17 16:06:49 -04:00
Mark Berrill
1eff3017d2 Fixing index issue when trying to read full domain in lbpm_uCT_pp 2016-06-16 14:03:39 -04:00
Mark Berrill
e494f34a66 Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-06-15 09:25:09 -04:00
Mark Berrill
0284d4acd0 Working on filter for lbpm_uCT_pp 2016-06-15 09:24:59 -04:00
James E McClure
e8095dd1ec Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-06-04 19:32:23 -04:00
James E McClure
0372fd0d05 Fixed weird MPI bug (bug is on MPI side) in lbpm_permeability_simulator 2016-06-04 19:31:44 -04:00
Mark Berrill
512ca33b64 Updating default C++ standard 2016-05-29 14:14:15 -04:00
James E McClure
a1b8970dd0 updated Eos / Titan build scripts for C++ 11 2016-05-29 10:43:37 -04:00
James E McClure
2e3db0a77c Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-05-29 10:17:32 -04:00
James E McClure
bb3a3ef9c4 Updates for C++11 build 2016-05-29 10:16:00 -04:00
James E McClure
351e7fa593 Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-05-27 15:57:33 -04:00
James E McClure
5dcf4f4b4d changes to lbpm_color_simulator.h 2016-05-27 15:57:17 -04:00
Mark Berrill
9aa3145e8a Adding fast distance calculation 2016-05-26 12:42:51 -04:00
Mark Berrill
a77fe2b914 Merge branch 'master' of https://github.com/JamesEMcClure/LBPM-WIA 2016-05-25 14:00:45 -04:00
Mark Berrill
b11d2c447e Working on lbpm_uCT 2016-05-25 14:00:28 -04:00
Mark Berrill
1b36f74bdf Updating lbpm_uCT_pp.cpp with new Array class, adding imfilter 2016-05-24 10:34:33 -04:00
James E McClure
b50fc1996b Updated morphological analysis pre-processor 2016-05-23 15:07:15 -04:00
James E McClure
46a1732591 fixed bug in morphological drainage initialization 2016-05-11 23:09:27 -04:00
James E McClure
bc5e0263ae Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA 2016-05-11 17:09:46 -04:00
James E McClure
4cea1c0159 Added morphological initialization lbpm_morph_pp 2016-05-11 17:09:38 -04:00
James E McClure
59541e779b Reverging to old lbpm_color_Simulator.h 2016-04-30 20:41:55 -04:00
James E McClure
e9099ce814 Using median within regions lbpm_uCT_pp 2016-04-25 19:25:16 -04:00
James E McClure
09b8c452db Using median within regions lbpm_uCT_pp 2016-04-25 19:19:42 -04:00
James E McClure
40c75ee1bb fixed bugs 2016-04-25 15:58:10 -04:00
James E McClure
ca97cd9133 switching to an exponential weight for the smoothing 2016-04-25 15:27:58 -04:00
James E McClure
f32ddcaddd Fixed interpolation bug, added global region mean 2016-04-25 12:03:57 -04:00
James E McClure
2c05b63595 Updating multiscale smoothing process 2016-04-25 10:52:59 -04:00
James E McClure
93ac48359f Added visualization of the multiscale mean for lbpm_uCT_pp 2016-04-25 10:47:09 -04:00
James E McClure
4d87dfce9e Added multi-scale smoother to segmentation workflow 2016-04-25 10:15:33 -04:00
James E McClure
e040b43268 Fixed little bug in visualization for lbpm_uCT_pp 2016-04-25 09:56:45 -04:00
James E McClure
b954246a62 Added fine grid segmentation and distance solution to lbpm_uCT_pp 2016-04-24 14:37:44 -04:00
James E McClure
6de7515b60 Changed scope of file input so that once VOLUME is distributed rank 0 no longer holds the full array in lbpm_uCT_pp 2016-04-24 11:08:16 -04:00
James E McClure
ecbd7d5eae Basic NLM implementation within lbpm_uCT_pp seems to work 2016-04-24 10:48:24 -04:00