Commit Graph

3453 Commits

Author SHA1 Message Date
Rex Zhe Li
4657adbc94 add routine for ion model to read from file 2020-09-28 17:08:49 -04:00
Rex Zhe Li
a1f375e86c Merge branch 'electrokinetic_dev' into electrokinetic 2020-09-25 17:09:37 -04:00
Rex Zhe Li
4c1ce54a6d found that higher-order terms in Ion BGK not very useful 2020-09-25 17:09:25 -04:00
Rex Zhe Li
e529caf6fe finish BC tweak 2020-09-25 17:02:16 -04:00
James McClure
fd27b3138a tweak BC conventions 2020-09-23 14:53:46 -04:00
James McClure
11be793575 use periodic BC in ScaLBL (model specific BC possible) 2020-09-23 12:30:22 -04:00
James McClure
0d6231f1cb read BC from model database 2020-09-22 14:33:51 -04:00
Rex Zhe Li
f0c7882639 add higher-order term in Ion equilibrium distribution 2020-09-21 23:54:28 -04:00
Rex Zhe Li
039978cc81 GPU version is available now 2020-09-20 11:00:36 -04:00
Rex Zhe Li
11e9af54b6 CPU only;finish preliminary work on testing Poisson and Ion models and their coupling 2020-09-11 22:56:00 -04:00
Rex Zhe Li
20c8cc9c3b update PoissonSolver and fix numerous bugs 2020-09-02 11:37:23 -04:00
Rex Zhe Li
86a1bb81a1 resolve merge conflict 2020-08-28 21:58:29 -04:00
Rex Zhe Li
0a7b1c331b further clean up the code 2020-08-28 21:53:41 -04:00
JamesEMcclure
a7afd9b429 fix poisson solver for unit test 2020-08-28 13:37:36 -04:00
James McClure
75e8647051 re-factor electric solvers for unit testing 2020-08-28 13:31:43 -04:00
Rex Zhe Li
aa26fcafda fix miscellaneous bugs and update the data structure of electric potential 2020-08-28 11:15:55 -04:00
Rex Zhe Li
59ffd7bfd6 fix several miscellaneous bugs 2020-08-20 22:47:10 -04:00
Rex Zhe Li
030bec9eba fix trivial bug in tau initialization 2020-08-19 18:56:06 -04:00
Rex Zhe Li
8996b582da still debugging; add a few checkpoint print out 2020-08-19 13:21:31 -04:00
Rex Zhe Li
5756d6f138 fix a few trivial bugs; add some checkpoint print; still debugging 2020-08-18 12:40:41 -04:00
Rex Zhe Li
771f679f5c add output; CPU version compiled; to be tested 2020-08-17 09:59:22 -04:00
Rex Zhe Li
85fc59190c save the work;CPU version compiled; to be tested 2020-08-16 11:20:11 -04:00
Rex Zhe Li
3adde14ecf resolve merge conflicts 2020-08-14 14:26:32 -04:00
Rex Zhe Li
3a162849a0 save the work;untested 2020-08-14 14:23:22 -04:00
James McClure
30014a49c0 add zeta potential to Poisson 2020-08-11 16:52:56 -04:00
JamesEMcclure
6ff5a9a8ae fixed bugs in bounceback list 2020-08-11 15:34:12 -04:00
James McClure
e0b0e05664 added bounce-back interaction capability 2020-08-11 15:16:40 -04:00
James McClure
3592ac7562 distinguish parallel comm / bounceback sites at halo 2020-08-11 14:35:46 -04:00
James McClure
b4d50ee821 example for how to structure ion comm loop 2020-08-10 12:54:55 -04:00
Rex Zhe Li
28988ef6ba save the work;untested 2020-08-10 12:03:28 -04:00
Rex Zhe Li
dff4e3d536 save the work;to be continued 2020-08-07 17:44:02 -04:00
James McClure
d9cde3c76c use generalized D3Q7 MPI structures for multi-ion 2020-08-06 16:12:18 -04:00
JamesEMcclure
fcdb84b2ad electro skeleton compiles 2020-08-06 16:06:52 -04:00
James McClure
082a0a30f5 Adding skeleton for electrokinetic LBM 2020-08-06 15:42:36 -04:00
James McClure
5e6a9f552c Adding skeleton for electrokinetic LBM 2020-08-06 15:41:40 -04:00
James McClure
00c30866f5 copy electrokinetic from color 2020-07-29 09:53:39 -04:00
JamesEMcclure
34d89786a6 fix smooth distance 2020-07-22 20:34:43 -04:00
JamesEMcclure
dd49031552 fix smooth distance 2020-07-22 20:31:09 -04:00
JamesEMcclure
c9640c46ba fix smooth distance 2020-07-22 13:14:07 -04:00
James E McClure
418ba77751 Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA 2020-07-22 11:58:02 -04:00
James E McClure
a1f3375911 added mean filter 2020-07-22 11:57:51 -04:00
James E McClure
4d2174cedb update Euler characteristic 2020-06-29 14:18:05 -04:00
James McClure
736870f4b5 still debugging Euler characteristic bug 2020-06-29 13:46:24 -04:00
James McClure
e11da909d6 use internal / external edge count in Euler characteristic 2020-06-29 11:07:55 -04:00
James McClure
9950201554 update cubes 2020-06-27 20:54:00 -04:00
James McClure
a3b23d246f Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA 2020-06-27 15:16:21 -04:00
James McClure
07ea37d2f2 at device test 2020-06-27 15:16:13 -04:00
JamesEMcclure
3dd7ba5936 refine dist in Minkowski (fix isosurface bugs) 2020-06-27 07:56:53 -04:00
JamesEMcclure
a16d82bac0 Eikonal solver in distance 2020-06-27 07:50:03 -04:00
JamesEMcclure
3d58822fef Eikonal solver in distance 2020-06-27 07:43:26 -04:00