# Clear all modules (except modules) #for var in ${LOADEDMODULES//:/ }; do if [ " ${var///*/}" != " modules" ]; then module unload " ${var///*/}" > /dev/null 2>&1; fi; done source $MODULESHOME/init/bash module unload PE-intel module load PE-gnu/6.2.0-2.0.1 #module load gcc/6.2.0 module load cmake3/3.5.2 module load openmpi netcdf hdf5 export MPICH_RDMA_ENABLED_CUDA=0 echo $GNU_VERSION module list # Remove CMake files from previous configures rm -rf CMake* # Configure cmake \ -D CMAKE_BUILD_TYPE:STRING=Release \ -D CMAKE_C_COMPILER:PATH=mpicc \ -D CMAKE_CXX_COMPILER:PATH=mpicxx \ -D CMAKE_CXX_COMPILER:PATH=mpicxx \ -D CMAKE_CXX_STD=11 \ -D USE_TIMER=false \ -D TIMER_DIRECTORY=${HOME}/timerutility/build/opt \ -D MPIEXEC=aprun \ -D USE_EXT_MPI_FOR_SERIAL_TESTS:BOOL=TRUE \ -D USE_CUDA=0 \ -D CUDA_FLAGS="-arch sm_35" \ -D USE_HDF5=1 \ -D USE_SILO=1 \ -D HDF5_DIRECTORY=/sw/rhea/hdf5/1.8.11/rhel6.6_gnu4.8.2/ \ -D HDF5_LIB=/sw/rhea/hdf5/1.8.11/rhel6.6_gnu4.8.2/lib/libhdf5.so \ -D SILO_DIRECTORY=/lustre/atlas1/geo106/proj-shared/rhea/silo\ ~/LBPM-WIA # -D PREFIX=$MEMBERWORK/geo106/eos-LBPM-WIA \ #-D CUDA_HOST_COMPILER="/usr/bin/gcc" \ # Build the code make install -j 8 # Fix permissions #chmod -R g+w $PROJWORK/geo106/eos-LBPM-WIA # Run the fast tests # ctest -E WEEKLY # Run the slow tests # ctest -R WEEKLY -VV