#!/usr/bin/env python import numpy as np from netCDF4 import Dataset def write_NetCDF_file_py(file_name,data_name,data_IN,data_IN_dtype,lx,ly,lz): # NOTE: the dataIN should have the size of lz*ly*lx data_IN.shape=(lz,ly,lx) # make sure data_IN has the right size # open a new netCDF file for writing. ncfile = Dataset(file_name,'w') # create the output data. # create the x, y and z dimensions. ncfile.createDimension('x',lx) ncfile.createDimension('y',ly) ncfile.createDimension('z',lz) # create the variable # first argument is name of variable, second is datatype, third is # a tuple with the names of dimensions. data = ncfile.createVariable(data_name,data_IN_dtype,('z','y','x')) data[:] = data_IN # data.voxel_unit = 'micrometer' # data.voxel_size=5.7 ncfile.close() print '**Info: The *.nc file is written successfully !' #end def def read_NetCDF_file_py(file_name,data_name): ncfile = Dataset(file_name,mode='r') dataOUT = ncfile.variables[data_name][:] ncfile.close() return dataOUT #end def