/*
 *  averaging tools for electrochemistry
 */

#ifndef FreeEnergyAnalyzer_INC
#define FreeEnergyAnalyzer_INC

#include <vector>
#include "common/Domain.h"
#include "common/Utilities.h"
#include "common/MPI.h"
#include "common/Communication.h"
#include "analysis/analysis.h"
#include "analysis/distance.h"
#include "analysis/Minkowski.h"
#include "analysis/SubPhase.h"
#include "IO/MeshDatabase.h"
#include "IO/Reader.h"
#include "IO/Writer.h"
#include "models/FreeLeeModel.h"

class FreeEnergyAnalyzer{
public:
	std::shared_ptr <Domain> Dm;
	double Volume;
	// input variables
	double rho_n, rho_w;
	double nu_n, nu_w;
	double gamma_wn, beta;
	double Fx, Fy, Fz;

    //...........................................................................
    int Nx,Ny,Nz;
	DoubleArray Rho;	           
	DoubleArray Phi;			
	DoubleArray ChemicalPotential;	    
	DoubleArray Pressure; 	
	DoubleArray Vel_x;		
	DoubleArray Vel_y;
	DoubleArray Vel_z;
	DoubleArray SDs;

	FreeEnergyAnalyzer(std::shared_ptr <Domain> Dm);
	~FreeEnergyAnalyzer();
	
	void SetParams();
	void Basic( ScaLBL_FreeLeeModel &LeeModel, int timestep);
	void WriteVis( ScaLBL_FreeLeeModel &LeeModel, std::shared_ptr<Database> input_db, int timestep);

private:
	FILE *TIMELOG;
};
#endif