34 lines
748 B
Bash
34 lines
748 B
Bash
#!/bin/bash
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#PBS -A GEO106
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#PBS -N Dist
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#PBS -j oe
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#PBS -l walltime=02:30:00,nodes=18
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##PBS -l walltime=01:00:00,nodes=18
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##PBS -l gres=widow2%widow3
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##PBS -q killable
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##PBS -q debug
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#cd /tmp/work/$USER
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date
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cd $PBS_O_WORKDIR
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#LBPM_WIA_INSTALL_DIR=/lustre/atlas/proj-shared/geo106/build-eos-LBPM-WIA
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LBPM_WIA_INSTALL_DIR=/ccs/proj/geo106/eos/LBPM-WIA
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#echo "PBS_O_WORKDIR: `echo $PBS_O_WORKDIR`"
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source $MODULESHOME/init/bash
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module swap PrgEnv-intel PrgEnv-gnu
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export LD_LIBRARY_PATH=${CRAY_LD_LIBRARY_PATH}:${LD_LIBRARY_PATH}
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# generate distance map from the binary image
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# input files are ID.xxxxx
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# output files are SignDist.xxxxx
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NUMPROCS=288
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aprun -n $NUMPROCS $LBPM_WIA_INSTALL_DIR/bin/lbpm_segmented_pp
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exit;
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