38 lines
952 B
Python
38 lines
952 B
Python
import numpy as np
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import matplotlib.pylab as plt
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D=np.ones((40,40,40),dtype="uint8")
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cx = 20
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cy = 20
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cz = 20
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for i in range(0, 40):
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for j in range (0, 40):
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for k in range (0,40):
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dist = np.sqrt((i-cx)*(i-cx) + (j-cx)*(j-cx) + (k-cz)*(k-cz))
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if (dist < 15.5 ) :
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D[i,j,k] = 2
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D.tofile("cell_40x40x40.raw")
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C1=np.zeros((40,40,40),dtype="double")
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C2=np.zeros((40,40,40),dtype="double")
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for i in range(0, 40):
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for j in range (0, 40):
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for k in range (0,40):
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#outside the cell
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C1[i,j,k] = 125.0e-6 # Na
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C2[i,j,k] = 125.0e-6 # Cl
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dist = np.sqrt((i-cx)*(i-cx) + (j-cx)*(j-cx) + (k-cz)*(k-cz))
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# inside the cell
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if (dist < 15.5 ) :
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C1[i,j,k] = 5.0e-6
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C2[i,j,k] = 5.0e-6
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C1.tofile("cell_concentration_Na_40x40x40.raw")
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C2.tofile("cell_concentration_Cl_40x40x40.raw")
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