mirror of
https://github.com/OPM/ResInsight.git
synced 2025-02-25 18:55:39 -06:00
Unit tests for correlation calculation
This commit is contained in:
parent
88ddeddca6
commit
111b758494
@ -57,9 +57,30 @@ const QString RiaStatisticsTools::replacePercentileByPValueText( const QString&
|
|||||||
//--------------------------------------------------------------------------------------------------
|
//--------------------------------------------------------------------------------------------------
|
||||||
double RiaStatisticsTools::pearsonCorrelation( const std::vector<double>& xValues, const std::vector<double>& yValues )
|
double RiaStatisticsTools::pearsonCorrelation( const std::vector<double>& xValues, const std::vector<double>& yValues )
|
||||||
{
|
{
|
||||||
|
#ifdef USE_GSL
|
||||||
|
return pearsonCorrelationGSL( xValues, yValues );
|
||||||
|
#else
|
||||||
|
return pearsonCorrelationOwn( xValues, yValues );
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
///
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
double RiaStatisticsTools::pearsonCorrelationGSL( const std::vector<double>& xValues, const std::vector<double>& yValues )
|
||||||
|
{
|
||||||
#ifdef USE_GSL
|
#ifdef USE_GSL
|
||||||
return gsl_stats_correlation( xValues.data(), 1, yValues.data(), 1, xValues.size() );
|
return gsl_stats_correlation( xValues.data(), 1, yValues.data(), 1, xValues.size() );
|
||||||
#else
|
#else
|
||||||
|
return std::numeric_limits<double>::infinity();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
///
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
double RiaStatisticsTools::pearsonCorrelationOwn( const std::vector<double>& xValues, const std::vector<double>& yValues )
|
||||||
|
{
|
||||||
const double eps = 1.0e-8;
|
const double eps = 1.0e-8;
|
||||||
if ( xValues.size() != yValues.size() ) return 0.0;
|
if ( xValues.size() != yValues.size() ) return 0.0;
|
||||||
if ( xValues.empty() ) return 0.0;
|
if ( xValues.empty() ) return 0.0;
|
||||||
@ -90,7 +111,6 @@ double RiaStatisticsTools::pearsonCorrelation( const std::vector<double>& xValue
|
|||||||
if ( sumxDiffSquared < eps || sumyDiffSquared < eps ) return 0.0;
|
if ( sumxDiffSquared < eps || sumyDiffSquared < eps ) return 0.0;
|
||||||
|
|
||||||
return sumNumerator / ( std::sqrt( sumxDiffSquared ) * std::sqrt( sumyDiffSquared ) );
|
return sumNumerator / ( std::sqrt( sumxDiffSquared ) * std::sqrt( sumyDiffSquared ) );
|
||||||
#endif
|
|
||||||
}
|
}
|
||||||
|
|
||||||
//--------------------------------------------------------------------------------------------------
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
@ -52,6 +52,7 @@ public:
|
|||||||
}
|
}
|
||||||
|
|
||||||
static double pearsonCorrelation( const std::vector<double>& xValues, const std::vector<double>& yValues );
|
static double pearsonCorrelation( const std::vector<double>& xValues, const std::vector<double>& yValues );
|
||||||
|
static double pearsonCorrelationGSL( const std::vector<double>& xValues, const std::vector<double>& yValues );
|
||||||
|
static double pearsonCorrelationOwn( const std::vector<double>& xValues, const std::vector<double>& yValues );
|
||||||
static double spearmanCorrelation( const std::vector<double>& xValues, const std::vector<double>& yValues );
|
static double spearmanCorrelation( const std::vector<double>& xValues, const std::vector<double>& yValues );
|
||||||
};
|
};
|
||||||
|
@ -69,6 +69,7 @@ ${CMAKE_CURRENT_LIST_DIR}/RifSurfaceReader-Test.cpp
|
|||||||
${CMAKE_CURRENT_LIST_DIR}/RifColorLegendData-Test.cpp
|
${CMAKE_CURRENT_LIST_DIR}/RifColorLegendData-Test.cpp
|
||||||
${CMAKE_CURRENT_LIST_DIR}/RifRoffReader-Test.cpp
|
${CMAKE_CURRENT_LIST_DIR}/RifRoffReader-Test.cpp
|
||||||
${CMAKE_CURRENT_LIST_DIR}/RifFaciesPropertiesReader-Test.cpp
|
${CMAKE_CURRENT_LIST_DIR}/RifFaciesPropertiesReader-Test.cpp
|
||||||
|
${CMAKE_CURRENT_LIST_DIR}/RiaStatisticsTools-Test.cpp
|
||||||
${CMAKE_CURRENT_LIST_DIR}/RifStimPlanXmlReader-Test.cpp
|
${CMAKE_CURRENT_LIST_DIR}/RifStimPlanXmlReader-Test.cpp
|
||||||
)
|
)
|
||||||
|
|
||||||
|
111
ApplicationCode/UnitTests/RiaStatisticsTools-Test.cpp
Normal file
111
ApplicationCode/UnitTests/RiaStatisticsTools-Test.cpp
Normal file
@ -0,0 +1,111 @@
|
|||||||
|
/////////////////////////////////////////////////////////////////////////////////
|
||||||
|
//
|
||||||
|
// Copyright (C) 2020- Equinor ASA
|
||||||
|
//
|
||||||
|
// ResInsight is free software: you can redistribute it and/or modify
|
||||||
|
// it under the terms of the GNU General Public License as published by
|
||||||
|
// the Free Software Foundation, either version 3 of the License, or
|
||||||
|
// (at your option) any later version.
|
||||||
|
//
|
||||||
|
// ResInsight is distributed in the hope that it will be useful, but WITHOUT ANY
|
||||||
|
// WARRANTY; without even the implied warranty of MERCHANTABILITY or
|
||||||
|
// FITNESS FOR A PARTICULAR PURPOSE.
|
||||||
|
//
|
||||||
|
// See the GNU General Public License at <http://www.gnu.org/licenses/gpl.html>
|
||||||
|
// for more details.
|
||||||
|
//
|
||||||
|
/////////////////////////////////////////////////////////////////////////////////
|
||||||
|
|
||||||
|
#include "gtest/gtest.h"
|
||||||
|
|
||||||
|
#include "RiaStatisticsTools.h"
|
||||||
|
|
||||||
|
#include <QDebug>
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
///
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
TEST( RiaStatisticsTools, NoCorrelation )
|
||||||
|
{
|
||||||
|
const int N = 1000;
|
||||||
|
std::vector<double> a, b;
|
||||||
|
a.reserve( N );
|
||||||
|
b.reserve( N );
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
a.push_back( (double)i );
|
||||||
|
}
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
b.push_back( (double)std::rand() );
|
||||||
|
}
|
||||||
|
double correlation = RiaStatisticsTools::pearsonCorrelation( a, b );
|
||||||
|
EXPECT_LE( correlation, 0.25 );
|
||||||
|
}
|
||||||
|
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
///
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
TEST( RiaStatisticsTools, FullCorrelation )
|
||||||
|
{
|
||||||
|
const int N = 1000;
|
||||||
|
std::vector<double> a, b;
|
||||||
|
a.reserve( N );
|
||||||
|
b.reserve( N );
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
a.push_back( (double)i );
|
||||||
|
}
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
b.push_back( i * 2.0 + 1.0 );
|
||||||
|
}
|
||||||
|
double correlation = RiaStatisticsTools::pearsonCorrelation( a, b );
|
||||||
|
EXPECT_NEAR( correlation, 1.0, 1.0e-2 );
|
||||||
|
}
|
||||||
|
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
///
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
TEST( RiaStatisticsTools, NegativeCorrelation )
|
||||||
|
{
|
||||||
|
const int N = 1000;
|
||||||
|
std::vector<double> a, b;
|
||||||
|
a.reserve( N );
|
||||||
|
b.reserve( N );
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
a.push_back( (double)i );
|
||||||
|
}
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
b.push_back( i * -2.0 + 1.0 );
|
||||||
|
}
|
||||||
|
double correlation = RiaStatisticsTools::pearsonCorrelation( a, b );
|
||||||
|
EXPECT_NEAR( correlation, -1.0, 1.0e-2 );
|
||||||
|
}
|
||||||
|
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
///
|
||||||
|
//--------------------------------------------------------------------------------------------------
|
||||||
|
#ifdef USE_GSL
|
||||||
|
TEST( RiaStatisticsTools, ComparisonGSLAndOwn )
|
||||||
|
{
|
||||||
|
const int N = 1000;
|
||||||
|
std::vector<double> a, b;
|
||||||
|
a.reserve( N );
|
||||||
|
b.reserve( N );
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
a.push_back( (double)i );
|
||||||
|
}
|
||||||
|
for ( int i = 0; i < N; ++i )
|
||||||
|
{
|
||||||
|
b.push_back( (double)std::rand() );
|
||||||
|
}
|
||||||
|
double correlationGSL = RiaStatisticsTools::pearsonCorrelationGSL( a, b );
|
||||||
|
double correlationOwn = RiaStatisticsTools::pearsonCorrelationOwn( a, b );
|
||||||
|
qDebug() << "GSL Correlation: " << correlationGSL << ", "
|
||||||
|
<< "Own Correlation: " << correlationOwn;
|
||||||
|
EXPECT_NEAR( correlationGSL, correlationOwn, 1.0e-3 );
|
||||||
|
}
|
||||||
|
#endif
|
Loading…
Reference in New Issue
Block a user