#ifdef USE_HDF5 #include "gtest/gtest.h" #include "H5Cpp.h" #include #include //-------------------------------------------------------------------------------------------------- /// //-------------------------------------------------------------------------------------------------- TEST( DISABLED_HDFTests, BasicFileRead ) { std::string file_path = "D:/ResInsight/SourSim/PKMUNK_NOV_TEST_SS.sourpre.00001"; try { H5::Exception::dontPrint(); // Turn off auto-printing of failures to handle the errors appropriately H5::H5File file( file_path.c_str(), H5F_ACC_RDONLY ); { H5::Group timestep = file.openGroup( "Timestep_00001" ); H5::Attribute attr = timestep.openAttribute( "timestep" ); double timestep_value = 0.0; H5::DataType type = attr.getDataType(); attr.read( type, ×tep_value ); // std::cout << "Timestep value " << timestep_value << std::endl; EXPECT_NEAR( timestep_value, 1.0, 1e-1 ); } { // Group size is not an attribute! H5::Group GridFunctions = file.openGroup( "Timestep_00001/GridParts/GridPart_00000/GridFunctions" ); hsize_t group_size = GridFunctions.getNumObjs(); // std::cout << "GridFunctions group_size " << group_size << std::endl; EXPECT_EQ( size_t( 20 ), group_size ); /* for (hsize_t i = 0; i < group_size; i++) { // H5std_string node_name = GridFunctions.getObjnameByIdx(i); // crashes on VS2017 due to lib/heap/runtime differences to HDF5 VS2015 lib std::string node_name; node_name.resize(1024); ssize_t slen = GridFunctions.getObjnameByIdx(i, &node_name[0], 1023); node_name.resize(slen + 1); std::cout << "GridFunctions sub-node name " << node_name << std::endl; } */ std::string first_subnode( 1024, '\0' ); ssize_t slen = GridFunctions.getObjnameByIdx( 0, &first_subnode[0], 1023 ); first_subnode.resize( slen + 1 ); EXPECT_TRUE( first_subnode.compare( 0, slen, "GridFunction_00002" ) == 0 ); } { H5::Group GridFunction_00002 = file.openGroup( "Timestep_00001/GridParts/GridPart_00000/GridFunctions/GridFunction_00002" ); H5::Attribute attr = GridFunction_00002.openAttribute( "limits_max" ); double limits_max = 0.0; H5::DataType type = attr.getDataType(); attr.read( type, &limits_max ); // std::cout << "limits_max " << limits_max << std::endl; EXPECT_NEAR( limits_max, 0.3970204292629652, 1e-10 ); } { H5::Group GridFunction_00002 = file.openGroup( "Timestep_00001/GridParts/GridPart_00000/GridFunctions/GridFunction_00002" ); H5::DataSet dataset = H5::DataSet( GridFunction_00002.openDataSet( "values" ) ); hsize_t dims[2]; H5::DataSpace dataspace = dataset.getSpace(); dataspace.getSimpleExtentDims( dims, nullptr ); std::vector values; values.resize( dims[0] ); dataset.read( values.data(), H5::PredType::NATIVE_DOUBLE ); /* for (hsize_t i = 0; i < dims[0]; i++) { std::cout << "value " << i << " " << values[i] << std::endl; } */ EXPECT_NEAR( values[0], 0.32356910366452146, 1e-10 ); EXPECT_NEAR( values[dims[0] - 1], 0.12200070891582514, 1e-10 ); } } // end of try block catch ( H5::FileIException error ) // catch failure caused by the H5File operations { std::cout << error.getCDetailMsg(); } catch ( H5::DataSetIException error ) // catch failure caused by the DataSet operations { std::cout << error.getCDetailMsg(); } catch ( H5::DataSpaceIException error ) // catch failure caused by the DataSpace operations { std::cout << error.getCDetailMsg(); } catch ( H5::DataTypeIException error ) // catch failure caused by the DataSpace operations { std::cout << error.getCDetailMsg(); } } #endif // USE_HDF5