#ifdef USE_HDF5 #include "gtest/gtest.h" #include "H5Cpp.h" #include #include //-------------------------------------------------------------------------------------------------- /// //-------------------------------------------------------------------------------------------------- TEST(DISABLED_HDFTests, BasicFileRead) { std::string file_path = "D:/ResInsight/SourSim/PKMUNK_NOV_TEST_SS.sourpre.00001"; try { H5::Exception::dontPrint(); // Turn off auto-printing of failures to handle the errors appropriately H5::H5File file(file_path.c_str(), H5F_ACC_RDONLY); { H5::Group timestep = file.openGroup("Timestep_00001"); H5::Attribute attr = timestep.openAttribute("timestep"); double timestep_value = 0.0; H5::DataType type = attr.getDataType(); attr.read(type, ×tep_value); //std::cout << "Timestep value " << timestep_value << std::endl; EXPECT_NEAR(timestep_value, 1.0, 1e-1); } { // Group size is not an attribute! H5::Group GridFunctions = file.openGroup("Timestep_00001/GridParts/GridPart_00000/GridFunctions"); hsize_t group_size = GridFunctions.getNumObjs(); //std::cout << "GridFunctions group_size " << group_size << std::endl; EXPECT_EQ(size_t(20), group_size); /* for (hsize_t i = 0; i < group_size; i++) { // H5std_string node_name = GridFunctions.getObjnameByIdx(i); // crashes on VS2017 due to lib/heap/runtime differences to HDF5 VS2015 lib std::string node_name; node_name.resize(1024); ssize_t slen = GridFunctions.getObjnameByIdx(i, &node_name[0], 1023); node_name.resize(slen + 1); std::cout << "GridFunctions sub-node name " << node_name << std::endl; } */ std::string first_subnode(1024, '\0'); ssize_t slen = GridFunctions.getObjnameByIdx(0, &first_subnode[0], 1023); first_subnode.resize(slen + 1); EXPECT_TRUE(first_subnode.compare(0, slen, "GridFunction_00002") == 0); } { H5::Group GridFunction_00002 = file.openGroup("Timestep_00001/GridParts/GridPart_00000/GridFunctions/GridFunction_00002"); H5::Attribute attr = GridFunction_00002.openAttribute("limits_max"); double limits_max = 0.0; H5::DataType type = attr.getDataType(); attr.read(type, &limits_max); // std::cout << "limits_max " << limits_max << std::endl; EXPECT_NEAR(limits_max, 0.3970204292629652, 1e-10); } { H5::Group GridFunction_00002 = file.openGroup("Timestep_00001/GridParts/GridPart_00000/GridFunctions/GridFunction_00002"); H5::DataSet dataset = H5::DataSet(GridFunction_00002.openDataSet("values")); hsize_t dims[2]; H5::DataSpace dataspace = dataset.getSpace(); dataspace.getSimpleExtentDims(dims, nullptr); std::vector values; values.resize(dims[0]); dataset.read(values.data(), H5::PredType::NATIVE_DOUBLE); /* for (hsize_t i = 0; i < dims[0]; i++) { std::cout << "value " << i << " " << values[i] << std::endl; } */ EXPECT_NEAR(values[0], 0.32356910366452146, 1e-10); EXPECT_NEAR(values[dims[0] - 1], 0.12200070891582514, 1e-10); } } // end of try block catch (H5::FileIException error) // catch failure caused by the H5File operations { std::cout << error.getCDetailMsg(); } catch (H5::DataSetIException error) // catch failure caused by the DataSet operations { std::cout << error.getCDetailMsg(); } catch (H5::DataSpaceIException error) // catch failure caused by the DataSpace operations { std::cout << error.getCDetailMsg(); } catch (H5::DataTypeIException error) // catch failure caused by the DataSpace operations { std::cout << error.getCDetailMsg(); } } #endif //USE_HDF5