2017-09-07 02:15:39 -05:00
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/*
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Copyright 2017 Dr. Blatt - HPC-Simulation-Software & Services
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This file is part of the Open Porous Media project (OPM).
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OPM is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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OPM is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with OPM. If not, see <http://www.gnu.org/licenses/>.
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*/
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#ifndef OPM_AMG_HEADER_INCLUDED
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#define OPM_AMG_HEADER_INCLUDED
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#include <opm/autodiff/ParallelOverlappingILU0.hpp>
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#include <opm/autodiff/CPRPreconditioner.hpp>
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#include <dune/istl/paamg/twolevelmethod.hh>
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#include <dune/istl/paamg/aggregates.hh>
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#include <dune/istl/bvector.hh>
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#include <dune/istl/bcrsmatrix.hh>
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#include <dune/istl/preconditioners.hh>
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#include <dune/istl/schwarz.hh>
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#include <dune/istl/operators.hh>
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#include <dune/istl/scalarproducts.hh>
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#include <dune/common/fvector.hh>
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#include <dune/common/fmatrix.hh>
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namespace Dune
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{
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namespace Amg
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{
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template<class M, class Norm>
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class UnSymmetricCriterion;
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}
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}
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namespace Dune
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{
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template <class Scalar, int n, int m>
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class MatrixBlock;
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}
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namespace Opm
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{
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namespace Detail
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{
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2018-02-05 14:02:44 -06:00
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/**
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* \brief Creates a MatrixAdapter as an operator
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*
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* The first argument is used to specify the return type using function overloading.
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* \param matrix The matrix to wrap.
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*/
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template<class M, class X, class Y, class T>
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Dune::MatrixAdapter<M,X,Y> createOperator(const Dune::MatrixAdapter<M,X,Y>&, const M& matrix, const T&)
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{
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return Dune::MatrixAdapter<M,X,Y>(matrix);
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}
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2018-02-05 14:02:44 -06:00
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/**
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* \brief Creates an OverlappingSchwarzOperator as an operator.
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*
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* The first argument is used to specify the return type using function overloading.
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* \param matrix The matrix to wrap.
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* \param comm The object encapsulating the parallelization information.
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*/
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template<class M, class X, class Y, class T>
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Dune::OverlappingSchwarzOperator<M,X,Y,T> createOperator(const Dune::OverlappingSchwarzOperator<M,X,Y,T>&,
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const M& matrix, const T& comm)
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{
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return Dune::OverlappingSchwarzOperator<M,X,Y,T>(matrix, comm);
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}
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//! \brief Applies diagonal scaling to the discretization Matrix (Scheichl, 2003)
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//!
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//! See section 3.2.3 of Scheichl, Masson: Decoupling and Block Preconditioning for
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//! Sedimentary Basin Simulations, 2003.
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//! \param op The operator that stems from the discretization.
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//! \param comm The communication objecte describing the data distribution.
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//! \param pressureIndex The index of the pressure in the matrix block
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//! \retun A pair of the scaled matrix and the associated operator-
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template<class Operator, class Communication>
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std::tuple<std::unique_ptr<typename Operator::matrix_type>, Operator>
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scaleMatrixQuasiImpes(const Operator& op, const Communication& comm,
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std::size_t pressureIndex)
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{
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using Matrix = typename Operator::matrix_type;
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using Block = typename Matrix::block_type;
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std::unique_ptr<Matrix> matrix(new Matrix(op.getmat()));
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for ( auto& row : *matrix )
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{
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for ( auto& block : row )
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{
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for ( std::size_t i = 0; i < Block::rows; i++ )
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{
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if ( i != pressureIndex )
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{
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for(std::size_t j=0; j < Block::cols; j++)
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{
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block[pressureIndex][j] += block[i][j];
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}
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}
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}
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}
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}
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return std::make_tuple(std::move(matrix), createOperator(op, *matrix, comm));
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}
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//! \brief Applies diagonal scaling to the discretization Matrix (Scheichl, 2003)
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//!
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//! See section 3.2.3 of Scheichl, Masson: Decoupling and Block Preconditioning for
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//! Sedimentary Basin Simulations, 2003.
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//! \param vector The vector to scale
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//! \param pressureIndex The index of the pressure in the matrix block
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template<class Vector>
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void scaleVectorQuasiImpes(Vector& vector, std::size_t pressureIndex)
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{
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using Block = typename Vector::block_type;
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for ( auto& block: vector)
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{
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for ( std::size_t i = 0; i < Block::dimension; i++ )
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{
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if ( i != pressureIndex )
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{
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block[pressureIndex] += block[i];
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}
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}
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}
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}
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//! \brief TMP to create the scalar pendant to a real block matrix, vector, smoother, etc.
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//!
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//! \code
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//! using Scalar = ScalarType<BlockType>::value;
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//! \endcode
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//! will get the corresponding scalar type.
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template<typename NonScalarType>
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struct ScalarType
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{
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};
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template<typename FieldType, int SIZE>
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struct ScalarType<Dune::FieldVector<FieldType, SIZE> >
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{
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typedef Dune::FieldVector<FieldType, 1> value;
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};
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template<typename FieldType, int ROWS, int COLS>
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struct ScalarType<Dune::FieldMatrix<FieldType, ROWS, COLS> >
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{
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typedef Dune::FieldMatrix<FieldType, 1, 1> value;
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};
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template<typename FieldType, int ROWS, int COLS>
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struct ScalarType<Dune::MatrixBlock<FieldType, ROWS, COLS> >
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{
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typedef Dune::MatrixBlock<FieldType, 1, 1> value;
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};
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template<typename BlockType, typename Allocator>
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struct ScalarType<Dune::BCRSMatrix<BlockType, Allocator> >
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{
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using ScalarBlock = typename ScalarType<BlockType>::value;
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using ScalarAllocator = typename Allocator::template rebind<ScalarBlock>::other;
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typedef Dune::BCRSMatrix<ScalarBlock,ScalarAllocator> value;
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};
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template<typename BlockType, typename Allocator>
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struct ScalarType<Dune::BlockVector<BlockType, Allocator> >
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{
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using ScalarBlock = typename ScalarType<BlockType>::value;
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using ScalarAllocator = typename Allocator::template rebind<ScalarBlock>::other;
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typedef Dune::BlockVector<ScalarBlock,ScalarAllocator> value;
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};
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template<typename X>
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struct ScalarType<Dune::SeqScalarProduct<X> >
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{
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typedef Dune::SeqScalarProduct<typename ScalarType<X>::value> value;
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};
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#define ComposeScalarTypeForSeqPrecond(PREC) \
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template<typename M, typename X, typename Y, int l> \
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struct ScalarType<PREC<M,X,Y,l> > \
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{ \
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typedef PREC<typename ScalarType<M>::value, \
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typename ScalarType<X>::value, \
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typename ScalarType<Y>::value, \
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l> value; \
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}
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ComposeScalarTypeForSeqPrecond(Dune::SeqJac);
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ComposeScalarTypeForSeqPrecond(Dune::SeqSOR);
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ComposeScalarTypeForSeqPrecond(Dune::SeqSSOR);
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ComposeScalarTypeForSeqPrecond(Dune::SeqGS);
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ComposeScalarTypeForSeqPrecond(Dune::SeqILU0);
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ComposeScalarTypeForSeqPrecond(Dune::SeqILUn);
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#undef ComposeScalarTypeForSeqPrecond
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template<typename X, typename Y>
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struct ScalarType<Dune::Richardson<X,Y> >
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{
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typedef Dune::Richardson<typename ScalarType<X>::value,
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typename ScalarType<Y>::value> value;
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};
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template<class M, class X, class Y, class C>
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struct ScalarType<Dune::OverlappingSchwarzOperator<M,X,Y,C> >
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{
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typedef Dune::OverlappingSchwarzOperator<typename ScalarType<M>::value,
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typename ScalarType<X>::value,
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typename ScalarType<Y>::value,
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C> value;
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};
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template<class M, class X, class Y>
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struct ScalarType<Dune::MatrixAdapter<M,X,Y> >
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{
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typedef Dune::MatrixAdapter<typename ScalarType<M>::value,
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typename ScalarType<X>::value,
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typename ScalarType<Y>::value> value;
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};
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template<class X, class C>
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struct ScalarType<Dune::OverlappingSchwarzScalarProduct<X,C> >
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{
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typedef Dune::OverlappingSchwarzScalarProduct<typename ScalarType<X>::value,
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C> value;
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};
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template<class X, class C>
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struct ScalarType<Dune::NonoverlappingSchwarzScalarProduct<X,C> >
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{
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typedef Dune::NonoverlappingSchwarzScalarProduct<typename ScalarType<X>::value,
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C> value;
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};
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template<class X, class Y, class C, class T>
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struct ScalarType<Dune::BlockPreconditioner<X,Y,C,T> >
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{
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typedef Dune::BlockPreconditioner<typename ScalarType<X>::value,
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typename ScalarType<Y>::value,
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C,
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typename ScalarType<T>::value> value;
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};
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template<class M, class X, class Y, class C>
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struct ScalarType<ParallelOverlappingILU0<M,X,Y,C> >
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{
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typedef ParallelOverlappingILU0<typename ScalarType<M>::value,
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typename ScalarType<X>::value,
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typename ScalarType<Y>::value,
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C> value;
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};
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template<class B, class N>
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struct ScalarType<Dune::Amg::CoarsenCriterion<Dune::Amg::SymmetricCriterion<Dune::BCRSMatrix<B>,N> > >
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{
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using value = Dune::Amg::CoarsenCriterion<Dune::Amg::SymmetricCriterion<Dune::BCRSMatrix<typename ScalarType<B>::value>, Dune::Amg::FirstDiagonal> >;
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};
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template<class B, class N>
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struct ScalarType<Dune::Amg::CoarsenCriterion<Dune::Amg::UnSymmetricCriterion<Dune::BCRSMatrix<B>,N> > >
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{
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using value = Dune::Amg::CoarsenCriterion<Dune::Amg::UnSymmetricCriterion<Dune::BCRSMatrix<typename ScalarType<B>::value>, Dune::Amg::FirstDiagonal> >;
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};
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template<class C, std::size_t COMPONENT_INDEX>
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struct OneComponentCriterionType
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{};
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template<class B, class N, std::size_t COMPONENT_INDEX>
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struct OneComponentCriterionType<Dune::Amg::CoarsenCriterion<Dune::Amg::SymmetricCriterion<Dune::BCRSMatrix<B>,N> >,COMPONENT_INDEX>
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{
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using value = Dune::Amg::CoarsenCriterion<Dune::Amg::SymmetricCriterion<Dune::BCRSMatrix<B>, Dune::Amg::Diagonal<COMPONENT_INDEX> > >;
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};
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template<class B, class N, std::size_t COMPONENT_INDEX>
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struct OneComponentCriterionType<Dune::Amg::CoarsenCriterion<Dune::Amg::UnSymmetricCriterion<Dune::BCRSMatrix<B>,N> >,COMPONENT_INDEX>
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{
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using value = Dune::Amg::CoarsenCriterion<Dune::Amg::UnSymmetricCriterion<Dune::BCRSMatrix<B>, Dune::Amg::Diagonal<COMPONENT_INDEX> > >;
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};
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template<class Operator, class Criterion, class Communication, std::size_t COMPONENT_INDEX>
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class OneComponentAggregationLevelTransferPolicy;
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/**
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* @brief A policy class for solving the coarse level system using one step of AMG.
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* @tparam O The type of the linear operator used.
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* @tparam S The type of the smoother used in AMG.
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* @tparam C The type of the crition used for the aggregation within AMG.
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* @tparam C1 The type of the information about the communication. Either
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* Dune::OwnerOverlapCopyCommunication or Dune::SequentialInformation.
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*/
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template<class O, class S, class C, class P>
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class OneStepAMGCoarseSolverPolicy
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{
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public:
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typedef P LevelTransferPolicy;
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/** @brief The type of the linear operator used. */
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typedef O Operator;
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/** @brief The type of the range and domain of the operator. */
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typedef typename O::range_type X;
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/** @brief The type of the crition used for the aggregation within AMG.*/
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typedef C Criterion;
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/** @brief The type of the communication used for AMG.*/
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typedef typename P::ParallelInformation Communication;
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/** @brief The type of the smoother used in AMG. */
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typedef S Smoother;
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/** @brief The type of the arguments used for constructing the smoother. */
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typedef typename Dune::Amg::SmootherTraits<S>::Arguments SmootherArgs;
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/** @brief The type of the AMG construct on the coarse level.*/
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typedef Dune::Amg::AMG<Operator,X,Smoother,Communication> AMGType;
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/**
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* @brief Constructs the coarse solver policy.
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* @param args The arguments used for constructing the smoother.
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* @param c The crition used for the aggregation within AMG.
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*/
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OneStepAMGCoarseSolverPolicy(const CPRParameter* param, const SmootherArgs& args, const Criterion& c)
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: param_(param), smootherArgs_(args), criterion_(c)
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{}
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/** @brief Copy constructor. */
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OneStepAMGCoarseSolverPolicy(const OneStepAMGCoarseSolverPolicy& other)
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: param_(other.param_), coarseOperator_(other.coarseOperator_), smootherArgs_(other.smootherArgs_),
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criterion_(other.criterion_)
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{}
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private:
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/**
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* @brief A wrapper that makes an inverse operator out of AMG.
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|
|
|
*
|
|
|
|
* The operator will use one step of AMG to approximately solve
|
|
|
|
* the coarse level system.
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|
|
|
*/
|
|
|
|
struct AMGInverseOperator : public Dune::InverseOperator<X,X>
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|
|
{
|
2018-02-05 05:43:20 -06:00
|
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|
AMGInverseOperator(const CPRParameter* param,
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|
|
|
const typename AMGType::Operator& op,
|
2017-09-07 02:15:39 -05:00
|
|
|
const Criterion& crit,
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|
|
const typename AMGType::SmootherArgs& args,
|
2018-02-05 05:43:20 -06:00
|
|
|
const Communication& comm)
|
2018-02-06 08:19:14 -06:00
|
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|
: param_(param), amg_(), smoother_(), op_(op), comm_(comm)
|
2018-02-02 07:40:48 -06:00
|
|
|
{
|
2018-02-05 05:43:20 -06:00
|
|
|
if ( param_->cpr_use_amg_ )
|
2018-02-02 07:40:48 -06:00
|
|
|
{
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|
|
|
amg_.reset(new AMGType(op, crit,args, comm));
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|
|
|
}
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|
|
|
else
|
|
|
|
{
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|
|
|
typename Dune::Amg::ConstructionTraits<Smoother>::Arguments cargs;
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|
|
cargs.setMatrix(op.getmat());
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|
|
cargs.setComm(comm);
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|
|
cargs.setArgs(args);
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|
smoother_.reset(Dune::Amg::ConstructionTraits<Smoother>::construct(cargs));
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|
}
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|
}
|
2017-09-07 02:15:39 -05:00
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|
2018-01-29 07:09:18 -06:00
|
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|
#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
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|
|
Dune::SolverCategory::Category category() const override
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|
|
|
{
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|
|
return std::is_same<Communication, Dune::Amg::SequentialInformation>::value ?
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|
|
|
Dune::SolverCategory::sequential : Dune::SolverCategory::overlapping;
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|
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|
}
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|
#endif
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|
|
2017-09-07 02:15:39 -05:00
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|
void apply(X& x, X& b, double reduction, Dune::InverseOperatorResult& res)
|
|
|
|
{
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|
|
|
DUNE_UNUSED_PARAMETER(reduction);
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|
|
DUNE_UNUSED_PARAMETER(res);
|
2018-02-06 08:19:14 -06:00
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|
2018-01-29 07:09:18 -06:00
|
|
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#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
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|
|
auto sp = Dune::createScalarProduct<X,Communication>(comm_, op_.category());
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|
|
#else
|
2017-09-07 02:15:39 -05:00
|
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|
using Chooser = Dune::ScalarProductChooser<X,Communication,AMGType::category>;
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|
auto sp = Chooser::construct(comm_);
|
2018-01-29 07:09:18 -06:00
|
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|
#endif
|
2018-02-02 07:40:48 -06:00
|
|
|
Dune::Preconditioner<X,X>* prec = amg_.get();
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|
|
|
if ( ! amg_ )
|
|
|
|
{
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|
|
|
prec = smoother_.get();
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|
|
|
}
|
2018-02-05 05:43:20 -06:00
|
|
|
// Linear solver parameters
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|
const double tolerance = param_->cpr_solver_tol_;
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|
const int maxit = param_->cpr_max_ell_iter_;
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|
|
const int verbosity = ( param_->cpr_solver_verbose_ &&
|
|
|
|
comm_.communicator().rank()==0 ) ? 1 : 0;
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|
|
|
if ( param_->cpr_use_bicgstab_ )
|
|
|
|
{
|
2018-02-05 16:09:37 -06:00
|
|
|
#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
|
2018-02-05 05:43:20 -06:00
|
|
|
Dune::BiCGSTABSolver<X> solver(const_cast<typename AMGType::Operator&>(op_), *sp, *prec,
|
|
|
|
tolerance, maxit, verbosity);
|
|
|
|
solver.apply(x,b,res);
|
2018-02-05 16:09:37 -06:00
|
|
|
#else
|
|
|
|
// Category of preconditioner will be checked at compile time. Therefore we need
|
|
|
|
// to cast to the derived class
|
|
|
|
if ( !amg_ )
|
|
|
|
{
|
|
|
|
Dune::BiCGSTABSolver<X> solver(const_cast<typename AMGType::Operator&>(op_), *sp,
|
|
|
|
reinterpret_cast<Smoother&>(*prec),
|
|
|
|
tolerance, maxit, verbosity);
|
|
|
|
solver.apply(x,b,res);
|
|
|
|
}
|
|
|
|
else
|
|
|
|
{
|
|
|
|
Dune::BiCGSTABSolver<X> solver(const_cast<typename AMGType::Operator&>(op_), *sp,
|
|
|
|
reinterpret_cast<AMGType&>(*prec),
|
|
|
|
tolerance, maxit, verbosity);
|
|
|
|
solver.apply(x,b,res);
|
|
|
|
}
|
|
|
|
#endif
|
2018-02-05 05:43:20 -06:00
|
|
|
}
|
|
|
|
else
|
|
|
|
{
|
2018-02-05 16:09:37 -06:00
|
|
|
#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
|
2018-02-05 05:43:20 -06:00
|
|
|
Dune::CGSolver<X> solver(const_cast<typename AMGType::Operator&>(op_), *sp, *prec,
|
|
|
|
tolerance, maxit, verbosity);
|
|
|
|
solver.apply(x,b,res);
|
2018-02-05 16:09:37 -06:00
|
|
|
#else
|
|
|
|
// Category of preconditioner will be checked at compile time. Therefore we need
|
|
|
|
// to cast to the derived class
|
|
|
|
if ( !amg_ )
|
|
|
|
{
|
|
|
|
Dune::CGSolver<X> solver(const_cast<typename AMGType::Operator&>(op_), *sp,
|
|
|
|
reinterpret_cast<Smoother&>(*prec),
|
|
|
|
tolerance, maxit, verbosity);
|
|
|
|
solver.apply(x,b,res);
|
|
|
|
}
|
|
|
|
else
|
|
|
|
{
|
|
|
|
Dune::CGSolver<X> solver(const_cast<typename AMGType::Operator&>(op_), *sp,
|
|
|
|
reinterpret_cast<AMGType&>(*prec),
|
|
|
|
tolerance, maxit, verbosity);
|
|
|
|
solver.apply(x,b,res);
|
|
|
|
}
|
|
|
|
#endif
|
2018-02-05 05:43:20 -06:00
|
|
|
}
|
|
|
|
|
2018-01-29 07:09:18 -06:00
|
|
|
#if ! DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
|
2017-09-07 02:15:39 -05:00
|
|
|
delete sp;
|
2018-01-29 07:09:18 -06:00
|
|
|
#endif
|
2017-09-07 02:15:39 -05:00
|
|
|
}
|
|
|
|
|
|
|
|
void apply(X& x, X& b, Dune::InverseOperatorResult& res)
|
|
|
|
{
|
|
|
|
return apply(x,b,1e-8,res);
|
|
|
|
}
|
|
|
|
|
|
|
|
~AMGInverseOperator()
|
2018-02-06 08:19:14 -06:00
|
|
|
{}
|
2017-09-07 02:15:39 -05:00
|
|
|
AMGInverseOperator(const AMGInverseOperator& other)
|
2018-02-06 08:19:14 -06:00
|
|
|
: x_(other.x_), amg_(other.amg_)
|
2017-09-07 02:15:39 -05:00
|
|
|
{
|
|
|
|
}
|
|
|
|
private:
|
2018-02-05 05:43:20 -06:00
|
|
|
const CPRParameter* param_;
|
2017-09-07 02:15:39 -05:00
|
|
|
X x_;
|
2018-02-02 07:40:48 -06:00
|
|
|
std::unique_ptr<AMGType> amg_;
|
|
|
|
std::unique_ptr<Smoother> smoother_;
|
2017-09-07 02:15:39 -05:00
|
|
|
const typename AMGType::Operator& op_;
|
|
|
|
const Communication& comm_;
|
|
|
|
};
|
|
|
|
|
|
|
|
public:
|
|
|
|
/** @brief The type of solver constructed for the coarse level. */
|
|
|
|
typedef AMGInverseOperator CoarseLevelSolver;
|
|
|
|
|
|
|
|
/**
|
|
|
|
* @brief Constructs a coarse level solver.
|
|
|
|
*
|
|
|
|
* @param transferPolicy The policy describing the transfer between levels.
|
|
|
|
* @return A pointer to the constructed coarse level solver.
|
|
|
|
*/
|
|
|
|
template<class LTP>
|
|
|
|
CoarseLevelSolver* createCoarseLevelSolver(LTP& transferPolicy)
|
|
|
|
{
|
|
|
|
coarseOperator_=transferPolicy.getCoarseLevelOperator();
|
|
|
|
const LevelTransferPolicy& transfer =
|
|
|
|
reinterpret_cast<const LevelTransferPolicy&>(transferPolicy);
|
2018-02-05 05:43:20 -06:00
|
|
|
AMGInverseOperator* inv = new AMGInverseOperator(param_,
|
|
|
|
*coarseOperator_,
|
2017-09-07 02:15:39 -05:00
|
|
|
criterion_,
|
|
|
|
smootherArgs_,
|
2018-02-05 05:43:20 -06:00
|
|
|
transfer.getCoarseLevelCommunication());
|
2017-09-07 02:15:39 -05:00
|
|
|
|
|
|
|
return inv; //std::shared_ptr<InverseOperator<X,X> >(inv);
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
private:
|
|
|
|
/** @brief The coarse level operator. */
|
|
|
|
std::shared_ptr<Operator> coarseOperator_;
|
2018-02-05 05:43:20 -06:00
|
|
|
/** @brief The parameters for the CPR preconditioner. */
|
|
|
|
const CPRParameter* param_;
|
2017-09-07 02:15:39 -05:00
|
|
|
/** @brief The arguments used to construct the smoother. */
|
|
|
|
SmootherArgs smootherArgs_;
|
|
|
|
/** @brief The coarsening criterion. */
|
|
|
|
Criterion criterion_;
|
|
|
|
};
|
|
|
|
|
|
|
|
template<class Smoother, class Operator, class Communication>
|
|
|
|
Smoother* constructSmoother(const Operator& op,
|
|
|
|
const typename Dune::Amg::SmootherTraits<Smoother>::Arguments& smargs,
|
|
|
|
const Communication& comm)
|
|
|
|
{
|
|
|
|
typename Dune::Amg::ConstructionTraits<Smoother>::Arguments args;
|
|
|
|
args.setMatrix(op.getmat());
|
|
|
|
args.setComm(comm);
|
|
|
|
args.setArgs(smargs);
|
|
|
|
return Dune::Amg::ConstructionTraits<Smoother>::construct(args);
|
|
|
|
}
|
|
|
|
|
|
|
|
template<class G, class C, class S>
|
|
|
|
const Dune::Amg::OverlapVertex<typename G::VertexDescriptor>*
|
|
|
|
buildOverlapVertices(const G& graph, const C& pinfo,
|
|
|
|
Dune::Amg::AggregatesMap<typename G::VertexDescriptor>& aggregates,
|
|
|
|
const S& overlap,
|
|
|
|
std::size_t& overlapCount)
|
|
|
|
{
|
|
|
|
// count the overlap vertices.
|
|
|
|
overlapCount = 0;
|
|
|
|
|
|
|
|
const auto& lookup=pinfo.globalLookup();
|
|
|
|
|
2018-02-06 08:30:24 -06:00
|
|
|
for ( const auto& vertex: graph ) {
|
|
|
|
const auto* pair = lookup.pair(vertex);
|
2017-09-07 02:15:39 -05:00
|
|
|
|
|
|
|
if(pair!=0 && overlap.contains(pair->local().attribute()))
|
|
|
|
++overlapCount;
|
|
|
|
}
|
|
|
|
// Allocate space
|
|
|
|
using Vertex = typename G::VertexDescriptor;
|
|
|
|
using OverlapVertex = Dune::Amg::OverlapVertex<Vertex>;
|
|
|
|
|
2018-02-06 08:30:24 -06:00
|
|
|
auto* overlapVertices = new OverlapVertex[overlapCount==0 ? 1 : overlapCount];
|
2017-09-07 02:15:39 -05:00
|
|
|
if(overlapCount==0)
|
|
|
|
return overlapVertices;
|
|
|
|
|
|
|
|
// Initialize them
|
|
|
|
overlapCount=0;
|
2018-02-06 08:30:24 -06:00
|
|
|
for ( const auto& vertex: graph ) {
|
|
|
|
const auto* pair = lookup.pair(vertex);
|
2017-09-07 02:15:39 -05:00
|
|
|
|
|
|
|
if(pair!=0 && overlap.contains(pair->local().attribute())) {
|
|
|
|
overlapVertices[overlapCount].aggregate = &aggregates[pair->local()];
|
|
|
|
overlapVertices[overlapCount].vertex = pair->local();
|
|
|
|
++overlapCount;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
std::sort(overlapVertices, overlapVertices+overlapCount,
|
|
|
|
[](const OverlapVertex& v1, const OverlapVertex& v2)
|
|
|
|
{
|
|
|
|
return *v1.aggregate < *v2.aggregate;
|
|
|
|
});
|
|
|
|
// due to the sorting the isolated aggregates (to be skipped) are at the end.
|
|
|
|
|
|
|
|
return overlapVertices;
|
|
|
|
}
|
|
|
|
|
|
|
|
template<class M, class G, class V, class C, class S>
|
|
|
|
void buildCoarseSparseMatrix(M& coarseMatrix, G& fineGraph,
|
|
|
|
const V& visitedMap,
|
|
|
|
const C& pinfo,
|
|
|
|
Dune::Amg::AggregatesMap<typename G::VertexDescriptor>& aggregates,
|
|
|
|
const S& overlap)
|
|
|
|
{
|
|
|
|
using OverlapVertex = Dune::Amg ::OverlapVertex<typename G::VertexDescriptor>;
|
|
|
|
std::size_t count;
|
|
|
|
|
|
|
|
const OverlapVertex* overlapVertices = buildOverlapVertices(fineGraph,
|
|
|
|
pinfo,
|
|
|
|
aggregates,
|
|
|
|
overlap,
|
|
|
|
count);
|
|
|
|
|
|
|
|
// Reset the visited flags of all vertices.
|
|
|
|
// As the isolated nodes will be skipped we simply mark them as visited
|
|
|
|
#ifndef NDEBUG
|
|
|
|
const auto UNAGGREGATED = Dune::Amg::AggregatesMap<typename G::VertexDescriptor>::UNAGGREGATED;
|
|
|
|
#endif
|
|
|
|
const auto ISOLATED = Dune::Amg::AggregatesMap<typename G::VertexDescriptor>::ISOLATED;
|
|
|
|
|
2018-02-06 08:30:24 -06:00
|
|
|
for ( const auto& vertex: fineGraph ) {
|
|
|
|
assert(aggregates[vertex] != UNAGGREGATED);
|
|
|
|
put(visitedMap, vertex, aggregates[vertex]==ISOLATED);
|
2017-09-07 02:15:39 -05:00
|
|
|
}
|
|
|
|
|
|
|
|
Dune::Amg::SparsityBuilder<M> sparsityBuilder(coarseMatrix);
|
|
|
|
|
|
|
|
Dune::Amg::ConnectivityConstructor<G,C>::examine(fineGraph, visitedMap, pinfo,
|
|
|
|
aggregates, overlap,
|
|
|
|
overlapVertices,
|
|
|
|
overlapVertices+count,
|
|
|
|
sparsityBuilder);
|
|
|
|
delete[] overlapVertices;
|
|
|
|
}
|
|
|
|
|
|
|
|
template<class M, class G, class V, class S>
|
|
|
|
void buildCoarseSparseMatrix(M& coarseMatrix, G& fineGraph, const V& visitedMap,
|
|
|
|
const Dune::Amg::SequentialInformation& pinfo,
|
|
|
|
Dune::Amg::AggregatesMap<typename G::VertexDescriptor>& aggregates,
|
|
|
|
const S&)
|
|
|
|
{
|
|
|
|
// Reset the visited flags of all vertices.
|
|
|
|
// As the isolated nodes will be skipped we simply mark them as visited
|
|
|
|
#ifndef NDEBUG
|
|
|
|
const auto UNAGGREGATED = Dune::Amg::AggregatesMap<typename G::VertexDescriptor>::UNAGGREGATED;
|
|
|
|
#endif
|
|
|
|
const auto ISOLATED = Dune::Amg::AggregatesMap<typename G::VertexDescriptor>::ISOLATED;
|
2018-02-06 08:30:24 -06:00
|
|
|
|
|
|
|
for(const auto& vertex: fineGraph ) {
|
|
|
|
assert(aggregates[vertex] != UNAGGREGATED);
|
|
|
|
put(visitedMap, vertex, aggregates[vertex]==ISOLATED);
|
2017-09-07 02:15:39 -05:00
|
|
|
}
|
|
|
|
|
|
|
|
Dune::Amg::SparsityBuilder<M> sparsityBuilder(coarseMatrix);
|
|
|
|
|
|
|
|
Dune::Amg::ConnectivityConstructor<G,Dune::Amg::SequentialInformation>
|
|
|
|
::examine(fineGraph, visitedMap, pinfo, aggregates, sparsityBuilder);
|
|
|
|
}
|
|
|
|
|
|
|
|
} // end namespace Detail
|
|
|
|
|
|
|
|
/**
|
|
|
|
* @brief A LevelTransferPolicy that uses aggregation to construct the coarse level system.
|
|
|
|
* @tparam Operator The type of the fine level operator.
|
|
|
|
* @tparam Criterion The criterion that describes the aggregation procedure.
|
|
|
|
* @tparam Communication The class that describes the communication pattern.
|
|
|
|
*/
|
|
|
|
template<class Operator, class Criterion, class Communication, std::size_t COMPONENT_INDEX>
|
|
|
|
class OneComponentAggregationLevelTransferPolicy
|
|
|
|
: public Dune::Amg::LevelTransferPolicy<Operator, typename Detail::ScalarType<Operator>::value>
|
|
|
|
{
|
|
|
|
typedef Dune::Amg::AggregatesMap<typename Operator::matrix_type::size_type> AggregatesMap;
|
|
|
|
public:
|
|
|
|
using CoarseOperator = typename Detail::ScalarType<Operator>::value;
|
|
|
|
typedef Dune::Amg::LevelTransferPolicy<Operator,CoarseOperator> FatherType;
|
|
|
|
typedef Communication ParallelInformation;
|
|
|
|
|
|
|
|
public:
|
2018-02-05 09:55:33 -06:00
|
|
|
OneComponentAggregationLevelTransferPolicy(const Criterion& crit, const Communication& comm,
|
|
|
|
bool cpr_pressure_aggregation)
|
|
|
|
: criterion_(crit), communication_(&const_cast<Communication&>(comm)),
|
|
|
|
cpr_pressure_aggregation_(cpr_pressure_aggregation)
|
2017-09-07 02:15:39 -05:00
|
|
|
{}
|
|
|
|
|
|
|
|
void createCoarseLevelSystem(const Operator& fineOperator)
|
|
|
|
{
|
|
|
|
prolongDamp_ = 1;
|
2018-01-29 05:40:14 -06:00
|
|
|
|
2018-02-05 09:55:33 -06:00
|
|
|
if ( cpr_pressure_aggregation_ )
|
2018-01-29 05:40:14 -06:00
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{
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2018-01-29 07:09:18 -06:00
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#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
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2018-01-29 05:40:14 -06:00
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typedef Dune::Amg::PropertiesGraphCreator<Operator,Communication> GraphCreator;
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2018-01-29 07:09:18 -06:00
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#else
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2018-01-29 05:40:14 -06:00
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typedef Dune::Amg::PropertiesGraphCreator<Operator> GraphCreator;
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2018-01-29 07:09:18 -06:00
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#endif
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2018-01-29 05:40:14 -06:00
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typedef typename GraphCreator::PropertiesGraph PropertiesGraph;
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typedef typename GraphCreator::GraphTuple GraphTuple;
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typedef typename PropertiesGraph::VertexDescriptor Vertex;
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std::vector<bool> excluded(fineOperator.getmat().N(), false);
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using OverlapFlags = Dune::NegateSet<typename ParallelInformation::OwnerSet>;
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GraphTuple graphs = GraphCreator::create(fineOperator, excluded,
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*communication_, OverlapFlags());
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aggregatesMap_.reset(new AggregatesMap(std::get<1>(graphs)->maxVertex()+1));
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int noAggregates, isoAggregates, oneAggregates, skippedAggregates;
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using std::get;
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std::tie(noAggregates, isoAggregates, oneAggregates, skippedAggregates) =
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aggregatesMap_->buildAggregates(fineOperator.getmat(), *(get<1>(graphs)),
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criterion_, true);
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2018-02-06 08:19:14 -06:00
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2018-01-29 05:40:14 -06:00
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using CommunicationArgs = typename Dune::Amg::ConstructionTraits<Communication>::Arguments;
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CommunicationArgs commArgs(communication_->communicator(), communication_->getSolverCategory());
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coarseLevelCommunication_.reset(Dune::Amg::ConstructionTraits<Communication>::construct(commArgs));
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using Iterator = typename std::vector<bool>::iterator;
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using std::get;
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auto visitedMap = get(Dune::Amg::VertexVisitedTag(), *(get<1>(graphs)));
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communication_->buildGlobalLookup(fineOperator.getmat().N());
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std::size_t aggregates =
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Dune::Amg::IndicesCoarsener<ParallelInformation,OverlapFlags>
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::coarsen(*communication_, *get<1>(graphs), visitedMap,
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*aggregatesMap_, *coarseLevelCommunication_,
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noAggregates);
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GraphCreator::free(graphs);
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coarseLevelCommunication_->buildGlobalLookup(aggregates);
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Dune::Amg::AggregatesPublisher<Vertex,OverlapFlags,ParallelInformation>
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::publish(*aggregatesMap_,
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*communication_,
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coarseLevelCommunication_->globalLookup());
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std::vector<bool>& visited=excluded;
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std::fill(visited.begin(), visited.end(), false);
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Dune::IteratorPropertyMap<Iterator, Dune::IdentityMap>
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visitedMap2(visited.begin(), Dune::IdentityMap());
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using CoarseMatrix = typename CoarseOperator::matrix_type;
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coarseLevelMatrix_.reset(new CoarseMatrix(aggregates, aggregates,
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CoarseMatrix::row_wise));
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Detail::buildCoarseSparseMatrix(*coarseLevelMatrix_, *get<0>(graphs), visitedMap2,
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*communication_,
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*aggregatesMap_,
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OverlapFlags());
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delete get<0>(graphs);
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communication_->freeGlobalLookup();
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if( static_cast<int>(this->coarseLevelMatrix_->N())
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< criterion_.coarsenTarget())
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{
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coarseLevelCommunication_->freeGlobalLookup();
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}
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calculateCoarseEntries(fineOperator.getmat());
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}
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else
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2017-09-07 02:15:39 -05:00
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{
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2018-01-29 05:40:14 -06:00
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using CoarseMatrix = typename CoarseOperator::matrix_type;
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const auto& fineLevelMatrix = fineOperator.getmat();
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coarseLevelMatrix_.reset(new CoarseMatrix(fineLevelMatrix.N(), fineLevelMatrix.M(), CoarseMatrix::row_wise));
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auto createIter = coarseLevelMatrix_->createbegin();
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for ( const auto& row: fineLevelMatrix )
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{
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for ( auto col = row.begin(), cend = row.end(); col != cend; ++col)
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{
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createIter.insert(col.index());
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}
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++createIter;
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}
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auto coarseRow = coarseLevelMatrix_->begin();
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for ( const auto& row: fineLevelMatrix )
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{
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auto coarseCol = coarseRow->begin();
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for ( auto col = row.begin(), cend = row.end(); col != cend; ++col, ++coarseCol )
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{
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assert( col.index() == coarseCol.index() );
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*coarseCol = (*col)[COMPONENT_INDEX][COMPONENT_INDEX];
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}
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++coarseRow;
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}
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coarseLevelCommunication_.reset(communication_, [](Communication*){});
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}
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2018-01-29 05:40:14 -06:00
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2017-09-07 02:15:39 -05:00
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this->lhs_.resize(this->coarseLevelMatrix_->M());
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this->rhs_.resize(this->coarseLevelMatrix_->N());
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using OperatorArgs = typename Dune::Amg::ConstructionTraits<CoarseOperator>::Arguments;
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OperatorArgs oargs(*coarseLevelMatrix_, *coarseLevelCommunication_);
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this->operator_.reset(Dune::Amg::ConstructionTraits<CoarseOperator>::construct(oargs));
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}
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template<class M>
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void calculateCoarseEntries(const M& fineMatrix)
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{
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*coarseLevelMatrix_ = 0;
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for(auto row = fineMatrix.begin(), rowEnd = fineMatrix.end();
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row != rowEnd; ++row)
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{
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const auto& i = (*aggregatesMap_)[row.index()];
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if(i != AggregatesMap::ISOLATED)
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{
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for(auto entry = row->begin(), entryEnd = row->end();
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entry != entryEnd; ++entry)
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{
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const auto& j = (*aggregatesMap_)[entry.index()];
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if ( j != AggregatesMap::ISOLATED )
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{
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(*coarseLevelMatrix_)[i][j] += (*entry)[COMPONENT_INDEX][COMPONENT_INDEX];
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}
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}
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}
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}
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}
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void moveToCoarseLevel(const typename FatherType::FineRangeType& fine)
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{
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// Set coarse vector to zero
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this->rhs_=0;
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2018-02-05 09:55:33 -06:00
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if ( cpr_pressure_aggregation_ )
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2017-09-07 02:15:39 -05:00
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{
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2018-01-29 05:40:14 -06:00
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auto end = fine.end(), begin=fine.begin();
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for(auto block=begin; block != end; ++block)
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{
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const auto& vertex = (*aggregatesMap_)[block-begin];
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if(vertex != AggregatesMap::ISOLATED)
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{
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this->rhs_[vertex] += (*block)[COMPONENT_INDEX];
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}
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}
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}
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else
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{
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auto end = fine.end(), begin=fine.begin();
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for(auto block=begin; block != end; ++block)
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2017-09-07 02:15:39 -05:00
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{
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2018-01-29 05:40:14 -06:00
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this->rhs_[block-begin] = (*block)[COMPONENT_INDEX];
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2017-09-07 02:15:39 -05:00
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}
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}
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2018-01-29 05:40:14 -06:00
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2017-09-07 02:15:39 -05:00
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this->lhs_=0;
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}
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void moveToFineLevel(typename FatherType::FineDomainType& fine)
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{
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2018-02-05 09:55:33 -06:00
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if( cpr_pressure_aggregation_ )
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2018-01-29 05:40:14 -06:00
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{
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this->lhs_ *= prolongDamp_;
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auto end=fine.end(), begin=fine.begin();
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2017-09-07 02:15:39 -05:00
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2018-01-29 05:40:14 -06:00
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for(auto block=begin; block != end; ++block)
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{
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const auto& vertex = (*aggregatesMap_)[block-begin];
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if(vertex != AggregatesMap::ISOLATED)
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(*block)[COMPONENT_INDEX] += this->lhs_[vertex];
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}
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communication_->copyOwnerToAll(fine,fine);
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}
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else
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2017-09-07 02:15:39 -05:00
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{
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2018-01-29 05:40:14 -06:00
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auto end=fine.end(), begin=fine.begin();
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for(auto block=begin; block != end; ++block)
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{
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(*block)[COMPONENT_INDEX] = this->lhs_[block-begin];
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}
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2017-09-07 02:15:39 -05:00
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}
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}
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OneComponentAggregationLevelTransferPolicy* clone() const
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{
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return new OneComponentAggregationLevelTransferPolicy(*this);
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}
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const Communication& getCoarseLevelCommunication() const
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{
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return *coarseLevelCommunication_;
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}
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private:
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typename Operator::matrix_type::field_type prolongDamp_;
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std::shared_ptr<AggregatesMap> aggregatesMap_;
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Criterion criterion_;
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Communication* communication_;
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std::shared_ptr<Communication> coarseLevelCommunication_;
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std::shared_ptr<typename CoarseOperator::matrix_type> coarseLevelMatrix_;
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2018-02-05 09:55:33 -06:00
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bool cpr_pressure_aggregation_;
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2017-09-07 02:15:39 -05:00
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};
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2018-02-05 14:02:44 -06:00
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/**
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* \brief An algebraic twolevel or multigrid approach for solving blackoil (supports CPR with and without AMG)
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*
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* This preconditioner first decouples the component used for coarsening using a simple scaling
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* approach (e.g. Scheichl, Masson 2013,\see scaleMatrixQuasiImpes). Then it constructs the first
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* coarse level system, either by simply extracting the coupling between the components at COMPONENT_INDEX
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2018-02-06 08:31:50 -06:00
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* in the matrix blocks or by extracting them and applying aggregation to them directly. This coarse level
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2018-02-05 14:02:44 -06:00
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* can be solved either by AMG or by ILU. The preconditioner is configured using CPRParameter.
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* \tparam O The type of the operator (encapsulating a BCRSMatrix).
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* \tparam S The type of the smoother.
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* \tparam C The type of coarsening criterion to use.
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2018-02-06 08:31:50 -06:00
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* \tparam P The type of the class describing the parallelization.
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2018-02-05 14:02:44 -06:00
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* \tparam COMPONENT_INDEX The index of the component to use for coarsening (usually the pressure).
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*/
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2017-09-07 02:15:39 -05:00
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template<typename O, typename S, typename C,
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typename P, std::size_t COMPONENT_INDEX>
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class BlackoilAmg
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: public Dune::Preconditioner<typename O::domain_type, typename O::range_type>
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{
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public:
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2018-02-05 14:02:44 -06:00
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/** \brief The type of the operator (encapsulating a BCRSMatrix). */
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2017-09-07 02:15:39 -05:00
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using Operator = O;
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2018-02-05 14:02:44 -06:00
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/** \brief The type of coarsening criterion to use. */
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2017-09-07 02:15:39 -05:00
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using Criterion = C;
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2018-02-06 08:31:50 -06:00
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/** \brief The type of the class describing the parallelization. */
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2017-09-07 02:15:39 -05:00
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using Communication = P;
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2018-02-05 14:02:44 -06:00
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/** \brief The type of the smoother. */
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2017-09-07 02:15:39 -05:00
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using Smoother = S;
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2018-02-05 14:02:44 -06:00
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/** \brief The type of the smoother arguments for construction. */
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using SmootherArgs = typename Dune::Amg::SmootherTraits<Smoother>::Arguments;
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2017-09-07 02:15:39 -05:00
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protected:
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2018-02-05 14:02:44 -06:00
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using Matrix = typename Operator::matrix_type;
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2017-09-07 02:15:39 -05:00
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using CoarseOperator = typename Detail::ScalarType<Operator>::value;
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using CoarseSmoother = typename Detail::ScalarType<Smoother>::value;
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using FineCriterion =
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typename Detail::OneComponentCriterionType<Criterion,COMPONENT_INDEX>::value;
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using CoarseCriterion = typename Detail::ScalarType<Criterion>::value;
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using LevelTransferPolicy =
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OneComponentAggregationLevelTransferPolicy<Operator,
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FineCriterion,
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Communication,
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COMPONENT_INDEX>;
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using CoarseSolverPolicy =
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Detail::OneStepAMGCoarseSolverPolicy<CoarseOperator,
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CoarseSmoother,
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CoarseCriterion,
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LevelTransferPolicy>;
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using TwoLevelMethod =
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Dune::Amg::TwoLevelMethod<Operator,
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CoarseSolverPolicy,
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Smoother>;
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public:
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2018-01-29 07:09:18 -06:00
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#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 6)
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Dune::SolverCategory::Category category() const override
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{
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return std::is_same<Communication, Dune::Amg::SequentialInformation>::value ?
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Dune::SolverCategory::sequential : Dune::SolverCategory::overlapping;
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}
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#else
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2017-09-07 02:15:39 -05:00
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// define the category
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enum {
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//! \brief The category the precondtioner is part of.
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category = Operator::category
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};
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2018-01-29 07:09:18 -06:00
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#endif
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2018-02-05 14:02:44 -06:00
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/**
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* \brief Constructor.
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* \param param The parameters used for configuring the solver.
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* \param fineOperator The operator of the fine level.
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* \param criterion The criterion describing the coarsening approach.
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* \param smargs The arguments for constructing the smoother.
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* \param comm The information about the parallelization.
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*/
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2018-02-05 05:43:20 -06:00
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BlackoilAmg(const CPRParameter& param,
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const Operator& fineOperator, const Criterion& criterion,
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2017-09-07 02:15:39 -05:00
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const SmootherArgs& smargs, const Communication& comm)
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2018-02-05 05:43:20 -06:00
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: param_(param),
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scaledMatrixOperator_(Detail::scaleMatrixQuasiImpes(fineOperator, comm,
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2018-02-01 02:15:48 -06:00
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COMPONENT_INDEX)),
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smoother_(Detail::constructSmoother<Smoother>(std::get<1>(scaledMatrixOperator_),
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smargs, comm)),
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2018-02-05 09:55:33 -06:00
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levelTransferPolicy_(criterion, comm, param.cpr_pressure_aggregation_),
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2018-02-05 05:43:20 -06:00
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coarseSolverPolicy_(¶m, smargs, criterion),
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2018-02-01 02:15:48 -06:00
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twoLevelMethod_(std::get<1>(scaledMatrixOperator_), smoother_,
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2017-09-07 02:15:39 -05:00
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levelTransferPolicy_,
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coarseSolverPolicy_, 0, 1)
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{}
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void pre(typename TwoLevelMethod::FineDomainType& x,
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typename TwoLevelMethod::FineRangeType& b)
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{
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twoLevelMethod_.pre(x,b);
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}
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void post(typename TwoLevelMethod::FineDomainType& x)
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{
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twoLevelMethod_.post(x);
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}
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void apply(typename TwoLevelMethod::FineDomainType& v,
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const typename TwoLevelMethod::FineRangeType& d)
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{
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2018-02-01 02:15:48 -06:00
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auto scaledD = d;
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Detail::scaleVectorQuasiImpes(scaledD, COMPONENT_INDEX);
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twoLevelMethod_.apply(v, scaledD);
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2017-09-07 02:15:39 -05:00
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}
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private:
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2018-02-05 05:43:20 -06:00
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const CPRParameter& param_;
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2018-02-01 02:15:48 -06:00
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std::tuple<std::unique_ptr<Matrix>, Operator> scaledMatrixOperator_;
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2017-09-07 02:15:39 -05:00
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std::shared_ptr<Smoother> smoother_;
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LevelTransferPolicy levelTransferPolicy_;
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CoarseSolverPolicy coarseSolverPolicy_;
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TwoLevelMethod twoLevelMethod_;
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};
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namespace ISTLUtility
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{
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///
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/// \brief A traits class for selecting the types of the preconditioner.
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///
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/// \tparam M The type of the matrix.
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/// \tparam X The type of the domain of the linear problem.
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/// \tparam Y The type of the range of the linear problem.
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/// \tparam P The type of the parallel information.
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/// \tparam C The type of the coarsening criterion to use.
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/// \tparam index The pressure index.
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////
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template<class M, class X, class Y, class P, class C, std::size_t index>
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struct BlackoilAmgSelector
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{
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using Criterion = C;
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using Selector = CPRSelector<M,X,Y,P>;
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using ParallelInformation = typename Selector::ParallelInformation;
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using Operator = typename Selector::Operator;
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using Smoother = typename Selector::EllipticPreconditioner;
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using AMG = BlackoilAmg<Operator,Smoother,Criterion,ParallelInformation,index>;
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};
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} // end namespace ISTLUtility
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} // end namespace Opm
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#endif
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