Add Hypre preconditioner

This commit is contained in:
jakobtorben
2024-11-06 16:00:19 +01:00
parent d0bcf54b00
commit 10f7a85532
5 changed files with 243 additions and 0 deletions

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@@ -35,6 +35,7 @@ option(USE_DAMARIS_LIB "Use the Damaris library for asynchronous I/O?" OFF)
option(USE_GPU_BRIDGE "Enable the GPU bridge (GPU/AMGCL solvers)" ON) option(USE_GPU_BRIDGE "Enable the GPU bridge (GPU/AMGCL solvers)" ON)
option(USE_TRACY_PROFILER "Enable tracy profiling" OFF) option(USE_TRACY_PROFILER "Enable tracy profiling" OFF)
option(CONVERT_CUDA_TO_HIP "Convert CUDA code to HIP (to run on AMD cards)" OFF) option(CONVERT_CUDA_TO_HIP "Convert CUDA code to HIP (to run on AMD cards)" OFF)
option(USE_HYPRE "Use the Hypre library for linear solvers?" OFF)
set(OPM_COMPILE_COMPONENTS "2;3;4;5;6;7" CACHE STRING "The components to compile support for") set(OPM_COMPILE_COMPONENTS "2;3;4;5;6;7" CACHE STRING "The components to compile support for")
# Ensure OPM_COMPILE_COMPONENTS is a list of at least one element # Ensure OPM_COMPILE_COMPONENTS is a list of at least one element
@@ -715,3 +716,17 @@ endif()
install(DIRECTORY doc/man1 DESTINATION ${CMAKE_INSTALL_MANDIR} install(DIRECTORY doc/man1 DESTINATION ${CMAKE_INSTALL_MANDIR}
FILES_MATCHING PATTERN "*.1") FILES_MATCHING PATTERN "*.1")
if(USE_HYPRE)
find_package(HYPRE)
if(HYPRE_FOUND)
set(HAVE_HYPRE 1)
else()
message(WARNING "Hypre requested but not found. Continuing without Hypre support.")
set(USE_HYPRE OFF)
endif()
endif()
if(HYPRE_FOUND)
target_link_libraries(opmsimulators PUBLIC HYPRE::HYPRE)
endif()

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@@ -1156,3 +1156,9 @@ if(dune-alugrid_FOUND)
examples/fracture_discretefracture.cpp examples/fracture_discretefracture.cpp
) )
endif() endif()
if(HYPRE_FOUND)
list(APPEND PUBLIC_HEADER_FILES
opm/simulators/linalg/HyprePreconditioner.hpp
)
endif()

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@@ -23,6 +23,7 @@ set (opm-simulators_CONFIG_VAR
HAVE_SUITESPARSE_UMFPACK HAVE_SUITESPARSE_UMFPACK
HAVE_DAMARIS HAVE_DAMARIS
HAVE_HDF5 HAVE_HDF5
HAVE_HYPRE
USE_HIP USE_HIP
USE_TRACY USE_TRACY
FLOW_INSTANTIATE_FLOAT FLOW_INSTANTIATE_FLOAT
@@ -56,6 +57,8 @@ set (opm-simulators_DEPS
# packages from ROCm framework # packages from ROCm framework
"rocblas" "rocblas"
"rocsparse" "rocsparse"
# HYPRE solver library
"HYPRE"
# OPM dependency # OPM dependency
"opm-common REQUIRED" "opm-common REQUIRED"
"opm-grid REQUIRED" "opm-grid REQUIRED"

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@@ -0,0 +1,208 @@
/*
Copyright 2024 SINTEF AS
This file is part of the Open Porous Media project (OPM).
OPM is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OPM is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with OPM. If not, see <http://www.gnu.org/licenses/>.
*/
#ifndef OPM_HYPRE_PRECONDITIONER_HEADER_INCLUDED
#define OPM_HYPRE_PRECONDITIONER_HEADER_INCLUDED
#include <opm/common/ErrorMacros.hpp>
#include <opm/common/TimingMacros.hpp>
#include <opm/simulators/linalg/PreconditionerWithUpdate.hpp>
#include <dune/common/fmatrix.hh>
#include <dune/istl/bcrsmatrix.hh>
#include <HYPRE.h>
#include <HYPRE_parcsr_ls.h>
#include <HYPRE_krylov.h>
#include <memory>
#include <vector>
namespace Dune {
/// Wrapper for Hypre's BoomerAMG preconditioner
template<class M, class X, class Y>
class HyprePreconditioner : public PreconditionerWithUpdate<X,Y> {
public:
//! \brief The matrix type the preconditioner is for
using matrix_type = M;
//! \brief The domain type of the preconditioner
using domain_type = X;
//! \brief The range type of the preconditioner
using range_type = Y;
//! \brief The field type of the preconditioner
using field_type = typename X::field_type;
// Constructor
HyprePreconditioner (const M& A)
: A_(A)
{
OPM_TIMEBLOCK(prec_construct);
// Initialize Hypre
HYPRE_Init();
// Create the solver (BoomerAMG)
HYPRE_BoomerAMGCreate(&solver_);
// Set some default parameters
HYPRE_BoomerAMGSetPrintLevel(solver_, 0); // Reduce output
HYPRE_BoomerAMGSetOldDefault(solver_); // Falgout coarsening with modified classical interpolation
HYPRE_BoomerAMGSetRelaxType(solver_, 3); // G-S/Jacobi hybrid relaxation
HYPRE_BoomerAMGSetRelaxOrder(solver_, 1); // Uses C/F relaxation
HYPRE_BoomerAMGSetNumSweeps(solver_, 1); // Sweeps on each level
HYPRE_BoomerAMGSetMaxLevels(solver_, 20); // Maximum number of levels
HYPRE_BoomerAMGSetTol(solver_, 1e-7); // Convergence tolerance
// Create the vectors
const int N = A_.N();
HYPRE_IJVectorCreate(MPI_COMM_WORLD, 0, N-1, &x_hypre_);
HYPRE_IJVectorCreate(MPI_COMM_WORLD, 0, N-1, &b_hypre_);
HYPRE_IJVectorSetObjectType(x_hypre_, HYPRE_PARCSR);
HYPRE_IJVectorSetObjectType(b_hypre_, HYPRE_PARCSR);
HYPRE_IJVectorInitialize(x_hypre_);
HYPRE_IJVectorInitialize(b_hypre_);
update();
}
// Destructor
~HyprePreconditioner() {
if (solver_) {
HYPRE_BoomerAMGDestroy(solver_);
}
if (parcsr_A_) {
HYPRE_IJMatrixDestroy(A_hypre_);
}
HYPRE_Finalize();
}
void update() override {
OPM_TIMEBLOCK(prec_update);
copyMatrixToHypre();
}
void pre(X& x, Y& b) override {
DUNE_UNUSED_PARAMETER(x);
DUNE_UNUSED_PARAMETER(b);
}
void apply(X& v, const Y& d) override {
OPM_TIMEBLOCK(prec_apply);
// Copy vectors to Hypre format
copyVectorsToHypre(v, d);
// Apply the preconditioner (one AMG V-cycle)
HYPRE_BoomerAMGSolve(solver_, parcsr_A_, par_b_, par_x_);
// Copy result back
copyVectorFromHypre(v);
}
void post(X& x) override {
DUNE_UNUSED_PARAMETER(x);
}
SolverCategory::Category category() const override {
return SolverCategory::sequential;
}
bool hasPerfectUpdate() const override
{
// The Hypre preconditioner can depend on the values of the matrix, so it must be recreated
return false;
}
private:
void copyMatrixToHypre() {
const int N = A_.N();
HYPRE_IJMatrixCreate(MPI_COMM_WORLD, 0, N-1, 0, N-1, &A_hypre_);
HYPRE_IJMatrixSetObjectType(A_hypre_, HYPRE_PARCSR);
HYPRE_IJMatrixInitialize(A_hypre_);
// Copy values from Dune matrix to Hypre matrix
for (auto row = A_.begin(); row != A_.end(); ++row) {
int i = row.index();
std::vector<int> cols;
std::vector<double> vals;
for (auto col = row->begin(); col != row->end(); ++col) {
cols.push_back(col.index());
vals.push_back(*col);
}
int ncols = cols.size();
HYPRE_IJMatrixSetValues(A_hypre_, 1, &ncols, &i, cols.data(), vals.data());
}
HYPRE_IJMatrixAssemble(A_hypre_);
HYPRE_IJMatrixGetObject(A_hypre_, (void**)&parcsr_A_);
// Setup the solver with the new matrix
HYPRE_BoomerAMGSetup(solver_, parcsr_A_, par_b_, par_x_);
}
void copyVectorsToHypre(const X& v, const Y& d) {
const int N = A_.N();
// Copy values
std::vector<int> indices(N);
std::vector<double> x_vals(N);
std::vector<double> b_vals(N);
for (int i = 0; i < N; ++i) {
indices[i] = i;
x_vals[i] = v[i];
b_vals[i] = d[i];
}
HYPRE_IJVectorSetValues(x_hypre_, N, indices.data(), x_vals.data());
HYPRE_IJVectorSetValues(b_hypre_, N, indices.data(), b_vals.data());
HYPRE_IJVectorGetObject(x_hypre_, (void**)&par_x_);
HYPRE_IJVectorGetObject(b_hypre_, (void**)&par_b_);
}
void copyVectorFromHypre(X& v) {
const int N = A_.N();
std::vector<int> indices(N);
std::vector<double> vals(N);
for (int i = 0; i < N; ++i) {
indices[i] = i;
}
HYPRE_IJVectorGetValues(x_hypre_, N, indices.data(), vals.data());
for (int i = 0; i < N; ++i) {
v[i] = vals[i];
}
}
const M& A_;
HYPRE_Solver solver_ = nullptr;
HYPRE_IJMatrix A_hypre_ = nullptr;
HYPRE_ParCSRMatrix parcsr_A_ = nullptr;
HYPRE_IJVector x_hypre_ = nullptr;
HYPRE_IJVector b_hypre_ = nullptr;
HYPRE_ParVector par_x_ = nullptr;
HYPRE_ParVector par_b_ = nullptr;
};
} // namespace Dune
#endif

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@@ -49,6 +49,10 @@
// Include all cuistl/GPU preconditioners inside of this headerfile // Include all cuistl/GPU preconditioners inside of this headerfile
#include <opm/simulators/linalg/PreconditionerFactoryGPUIncludeWrapper.hpp> #include <opm/simulators/linalg/PreconditionerFactoryGPUIncludeWrapper.hpp>
#if HAVE_HYPRE
#include <opm/simulators/linalg/HyprePreconditioner.hpp>
#endif
namespace Opm { namespace Opm {
@@ -543,6 +547,13 @@ struct StandardPreconditioners<Operator, Dune::Amg::SequentialInformation> {
return getRebuildOnUpdateWrapper<Dune::Amg::FastAMG<O, V>>(op, crit, parms); return getRebuildOnUpdateWrapper<Dune::Amg::FastAMG<O, V>>(op, crit, parms);
} }
}); });
// Only add Hypre for scalar matrices
if constexpr (M::block_type::rows == 1 && M::block_type::cols == 1) {
F::addCreator("HypreBoomerAMG", [](const O& op, const P& prm, const std::function<V()>&, std::size_t) {
DUNE_UNUSED_PARAMETER(prm);
return std::make_shared<HyprePreconditioner<M, V, V>>(op.getmat());
});
}
} }
if constexpr (std::is_same_v<O, WellModelMatrixAdapter<M, V, V, false>>) { if constexpr (std::is_same_v<O, WellModelMatrixAdapter<M, V, V, false>>) {
F::addCreator( F::addCreator(