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https://github.com/OPM/opm-simulators.git
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Add AMGX preconditioner
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@ -35,6 +35,7 @@ option(USE_DAMARIS_LIB "Use the Damaris library for asynchronous I/O?" OFF)
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option(USE_GPU_BRIDGE "Enable the GPU bridge (GPU/AMGCL solvers)" ON)
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option(USE_TRACY_PROFILER "Enable tracy profiling" OFF)
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option(CONVERT_CUDA_TO_HIP "Convert CUDA code to HIP (to run on AMD cards)" OFF)
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option(USE_AMGX "Enable AMGX support?" OFF)
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option(USE_HYPRE "Use the Hypre library for linear solvers?" OFF)
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set(OPM_COMPILE_COMPONENTS "2;3;4;5;6;7" CACHE STRING "The components to compile support for")
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option(USE_OPENCL "Enable OpenCL support?" ON)
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@ -307,6 +308,18 @@ elseif(USE_HYPRE)
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set(HYPRE_FOUND OFF)
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endif()
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# Find AMGX
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if(USE_AMGX)
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find_package(AMGX)
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if(AMGX_FOUND)
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set(HAVE_AMGX 1)
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list(APPEND opm-simulators_LIBRARIES AMGX::AMGX)
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else()
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message(WARNING "AMGX requested but not found. Continuing without AMGX support.")
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set(USE_AMGX OFF)
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endif()
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endif()
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macro (config_hook)
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opm_need_version_of ("dune-common")
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opm_need_version_of ("dune-istl")
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@ -1162,3 +1162,9 @@ if(HYPRE_FOUND)
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opm/simulators/linalg/HyprePreconditioner.hpp
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)
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endif()
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if(AMGX_FOUND)
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list(APPEND PUBLIC_HEADER_FILES
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opm/simulators/linalg/AmgxPreconditioner.hpp
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)
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endif()
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@ -10,6 +10,7 @@ set (opm-simulators_CONFIG_VAR
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HAVE_OPENCL
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HAVE_OPENCL_HPP
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HAVE_AMGCL
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HAVE_AMGX
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HAVE_VEXCL
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HAVE_ROCALUTION
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HAVE_ROCSPARSE
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@ -40,6 +40,10 @@
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#include <HYPRE_utilities.h>
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#endif
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#if HAVE_AMGX
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#include <amgx_c.h>
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#endif
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namespace Opm {
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Main::Main(int argc, char** argv, bool ownMPI)
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@ -97,6 +101,10 @@ Main::~Main()
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HYPRE_Finalize();
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#endif
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#if HAVE_AMGX
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AMGX_SAFE_CALL(AMGX_finalize());
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#endif
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if (ownMPI_) {
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FlowGenericVanguard::setCommunication(nullptr);
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}
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@ -180,6 +188,10 @@ void Main::initMPI()
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HYPRE_Init();
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#endif
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#endif
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#if HAVE_AMGX
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AMGX_SAFE_CALL(AMGX_initialize());
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#endif
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}
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void Main::handleVersionCmdLine_(int argc, char** argv,
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318
opm/simulators/linalg/AmgxPreconditioner.hpp
Normal file
318
opm/simulators/linalg/AmgxPreconditioner.hpp
Normal file
@ -0,0 +1,318 @@
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/*
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Copyright 2024 SINTEF AS
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Copyright 2024 Equinor ASA
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This file is part of the Open Porous Media project (OPM).
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OPM is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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OPM is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with OPM. If not, see <http://www.gnu.org/licenses/>.
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*/
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#ifndef OPM_AMGX_PRECONDITIONER_HEADER_INCLUDED
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#define OPM_AMGX_PRECONDITIONER_HEADER_INCLUDED
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#include <opm/common/ErrorMacros.hpp>
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#include <opm/common/TimingMacros.hpp>
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#include <opm/simulators/linalg/PreconditionerWithUpdate.hpp>
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#include <opm/simulators/linalg/PropertyTree.hpp>
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#include <dune/common/fmatrix.hh>
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#include <dune/istl/bcrsmatrix.hh>
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#include <amgx_c.h>
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#include <vector>
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namespace Amgx {
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/**
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* @brief Configuration structure for AMGX parameters.
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*
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* This structure holds the configuration parameters for the AMGX solver.
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*/
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struct AmgxConfig {
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int determinism_flag = 0;
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int print_grid_stats = 0;
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int print_solve_stats = 0;
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std::string solver = "AMG";
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std::string algorithm = "CLASSICAL";
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std::string interpolator = "D2";
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std::string selector = "PMIS";
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std::string smoother = "BLOCK_JACOBI";
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int presweeps = 3;
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int postsweeps = 3;
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double strength_threshold = 0.5;
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int max_iters = 1;
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explicit AmgxConfig(const Opm::PropertyTree& prm) {
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determinism_flag = prm.get<int>("determinism_flag", determinism_flag);
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print_grid_stats = prm.get<int>("print_grid_stats", print_grid_stats);
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print_solve_stats = prm.get<int>("print_solve_stats", print_solve_stats);
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solver = prm.get<std::string>("solver", solver);
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algorithm = prm.get<std::string>("algorithm", algorithm);
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interpolator = prm.get<std::string>("interpolator", interpolator);
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selector = prm.get<std::string>("selector", selector);
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smoother = prm.get<std::string>("smoother", smoother);
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presweeps = prm.get<int>("presweeps", presweeps);
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postsweeps = prm.get<int>("postsweeps", postsweeps);
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strength_threshold = prm.get<double>("strength_threshold", strength_threshold);
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max_iters = prm.get<int>("max_iters", max_iters);
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}
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std::string toString() const {
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return "config_version=2, "
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"determinism_flag=" + std::to_string(determinism_flag) + ", "
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"print_grid_stats=" + std::to_string(print_grid_stats) + ", "
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"print_solve_stats=" + std::to_string(print_solve_stats) + ", "
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"solver=" + solver + ", "
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"algorithm=" + algorithm + ", "
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"interpolator=" + interpolator + ", "
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"selector=" + selector + ", "
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"smoother=" + smoother + ", "
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"presweeps=" + std::to_string(presweeps) + ", "
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"postsweeps=" + std::to_string(postsweeps) + ", "
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"strength_threshold=" + std::to_string(strength_threshold) + ", "
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"max_iters=" + std::to_string(max_iters);
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}
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};
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/**
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* @brief Wrapper for AMGX's AMG preconditioner.
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*
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* This class provides an interface to the AMG preconditioner from the AMGX library.
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* It is designed to work with matrices, update vectors, and defect vectors specified
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* by the template parameters.
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*
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* @tparam M The matrix type the preconditioner is for.
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* @tparam X The type of the update vector.
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* @tparam Y The type of the defect vector.
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*/
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template<class M, class X, class Y>
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class AmgxPreconditioner : public Dune::PreconditionerWithUpdate<X,Y>
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{
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public:
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//! \brief The matrix type the preconditioner is for
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using matrix_type = M;
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//! \brief The domain type of the preconditioner
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using domain_type = X;
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//! \brief The range type of the preconditioner
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using range_type = Y;
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//! \brief The field type of the preconditioner
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using field_type = typename X::field_type;
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static constexpr int block_size = 1;
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/**
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* @brief Constructor for the AmgxPreconditioner class.
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*
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* Initializes the preconditioner with the given matrix and property tree.
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*
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* @param A The matrix for which the preconditioner is constructed.
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* @param prm The property tree containing configuration parameters.
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*/
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AmgxPreconditioner(const M& A, const Opm::PropertyTree prm)
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: A_(A)
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, N_(A.N())
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, nnz_(A.nonzeroes())
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{
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OPM_TIMEBLOCK(prec_construct);
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// Create configuration
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AmgxConfig config(prm);
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AMGX_SAFE_CALL(AMGX_config_create(&cfg_, config.toString().c_str()));
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AMGX_SAFE_CALL(AMGX_resources_create_simple(&rsrc_, cfg_));
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// Create solver and matrix/vector handles
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AMGX_SAFE_CALL(AMGX_solver_create(&solver_, rsrc_, AMGX_mode_dDDI, cfg_));
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AMGX_SAFE_CALL(AMGX_matrix_create(&A_amgx_, rsrc_, AMGX_mode_dDDI));
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AMGX_SAFE_CALL(AMGX_vector_create(&x_amgx_, rsrc_, AMGX_mode_dDDI));
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AMGX_SAFE_CALL(AMGX_vector_create(&b_amgx_, rsrc_, AMGX_mode_dDDI));
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// Setup matrix structure
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std::vector<int> row_ptrs(N_ + 1);
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std::vector<int> col_indices(nnz_);
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setupSparsityPattern(row_ptrs, col_indices);
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// initialize matrix with values
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const field_type* values = &(A_[0][0][0][0]);
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AMGX_SAFE_CALL(AMGX_pin_memory(const_cast<field_type*>(values), sizeof(field_type) * nnz_ * block_size * block_size));
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AMGX_SAFE_CALL(AMGX_matrix_upload_all(A_amgx_, N_, nnz_, block_size, block_size,
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row_ptrs.data(), col_indices.data(),
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values, nullptr));
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update();
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}
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/**
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* @brief Destructor for the AmgxPreconditioner class.
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*
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* Cleans up resources allocated by the preconditioner.
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*/
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~AmgxPreconditioner()
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{
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const field_type* values = &(A_[0][0][0][0]);
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AMGX_SAFE_CALL(AMGX_unpin_memory(const_cast<field_type*>(values)));
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if (solver_) {
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AMGX_SAFE_CALL(AMGX_solver_destroy(solver_));
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}
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if (x_amgx_) {
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AMGX_SAFE_CALL(AMGX_vector_destroy(x_amgx_));
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}
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if (b_amgx_) {
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AMGX_SAFE_CALL(AMGX_vector_destroy(b_amgx_));
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}
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if (A_amgx_) {
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AMGX_SAFE_CALL(AMGX_matrix_destroy(A_amgx_));
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}
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// Destroying resources and config crashes when reinitializing
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//if (rsrc_) {
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// AMGX_SAFE_CALL(AMGX_resources_destroy(rsrc_));
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//}
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//if (cfg_) {
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// AMGX_SAFE_CALL(AMGX_config_destroy(cfg_));
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//}
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}
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/**
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* @brief Pre-processing step before applying the preconditioner.
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*
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* This method is currently a no-op.
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*
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* @param v The update vector.
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* @param d The defect vector.
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*/
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void pre(X& /*v*/, Y& /*d*/) override {
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}
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/**
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* @brief Applies the preconditioner to a vector.
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*
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* Performs one AMG cycle to solve the system.
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* Involves uploading vectors to AMGX, applying the preconditioner, and downloading the result.
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*
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* @param v The update vector.
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* @param d The defect vector.
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*/
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void apply(X& v, const Y& d) override
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{
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OPM_TIMEBLOCK(prec_apply);
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// Upload vectors to AMGX
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AMGX_SAFE_CALL(AMGX_vector_upload(x_amgx_, N_, block_size, &v[0][0]));
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AMGX_SAFE_CALL(AMGX_vector_upload(b_amgx_, N_, block_size, &d[0][0]));
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// Apply preconditioner
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AMGX_SAFE_CALL(AMGX_solver_solve(solver_, b_amgx_, x_amgx_));
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// Download result
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AMGX_SAFE_CALL(AMGX_vector_download(x_amgx_, &v[0][0]));
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}
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/**
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* @brief Post-processing step after applying the preconditioner.
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*
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* This method is currently a no-op.
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*
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* @param v The update vector.
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*/
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void post(X& /*v*/) override {
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}
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/**
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* @brief Updates the preconditioner with the current matrix values.
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*
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* This method should be called whenever the matrix values change.
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*/
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void update() override
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{
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OPM_TIMEBLOCK(prec_update);
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copyMatrixToAmgx();
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AMGX_SAFE_CALL(AMGX_solver_setup(solver_, A_amgx_));
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}
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/**
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* @brief Returns the solver category.
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*
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* @return The solver category, which is sequential.
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*/
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Dune::SolverCategory::Category category() const override
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{
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return Dune::SolverCategory::sequential;
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}
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/**
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* @brief Checks if the preconditioner has a perfect update.
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*
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* @return True, indicating that the preconditioner can be perfectly updated.
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*/
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bool hasPerfectUpdate() const override
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{
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// The Amgx preconditioner can depend on the values of the matrix, so it must be recreated
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return false;
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}
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private:
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/**
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* @brief Sets up the sparsity pattern for the AMGX matrix.
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*
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* This method initializes the row pointers and column indices for the AMGX matrix.
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*
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* @param row_ptrs The row pointers for the AMGX matrix.
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* @param col_indices The column indices for the AMGX matrix.
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*/
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void setupSparsityPattern(std::vector<int>& row_ptrs, std::vector<int>& col_indices)
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{
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int pos = 0;
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row_ptrs[0] = 0;
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for (auto row = A_.begin(); row != A_.end(); ++row) {
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for (auto col = row->begin(); col != row->end(); ++col) {
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col_indices[pos++] = col.index();
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}
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row_ptrs[row.index() + 1] = pos;
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}
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}
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/**
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* @brief Copies the matrix values to the AMGX matrix.
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*
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* This method updates the AMGX matrix with the current matrix values.
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* The method assumes that the sparsity structure is the same and that
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* the values are stored in a contiguous array.
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*/
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void copyMatrixToAmgx()
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{
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// Get direct pointer to matrix values
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const field_type* values = &(A_[0][0][0][0]);
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// Indexing explanation:
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// A_[0] - First row of the matrix
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// [0] - First block in that row
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// [0] - First row within the 1x1 block
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// [0] - First column within the 1x1 block
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// update matrix with new values, assuming the sparsity structure is the same
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AMGX_SAFE_CALL(AMGX_matrix_replace_coefficients(A_amgx_, N_, nnz_, values, nullptr));
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}
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const M& A_; //!< The matrix for which the preconditioner is constructed.
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const int N_; //!< Number of rows in the matrix.
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const int nnz_; //!< Number of non-zero elements in the matrix.
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AMGX_config_handle cfg_ = nullptr; //!< The AMGX configuration handle.
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AMGX_resources_handle rsrc_ = nullptr; //!< The AMGX resources handle.
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AMGX_solver_handle solver_ = nullptr; //!< The AMGX solver handle.
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AMGX_matrix_handle A_amgx_ = nullptr; //!< The AMGX matrix handle.
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AMGX_vector_handle x_amgx_ = nullptr; //!< The AMGX solution vector handle.
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AMGX_vector_handle b_amgx_ = nullptr; //!< The AMGX right-hand side vector handle.
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};
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} // namespace Amgx
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#endif // OPM_AMGX_PRECONDITIONER_HEADER_INCLUDED
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@ -53,6 +53,9 @@
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#include <opm/simulators/linalg/HyprePreconditioner.hpp>
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#endif
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#if HAVE_AMGX
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#include <opm/simulators/linalg/AmgxPreconditioner.hpp>
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#endif
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namespace Opm {
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@ -547,6 +550,16 @@ struct StandardPreconditioners<Operator, Dune::Amg::SequentialInformation> {
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return getRebuildOnUpdateWrapper<Dune::Amg::FastAMG<O, V>>(op, crit, parms);
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}
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});
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#if HAVE_AMGX
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// Only add AMGX for scalar matrices
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if constexpr (M::block_type::rows == 1 && M::block_type::cols == 1) {
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F::addCreator("amgx", [](const O& op, const P& prm, const std::function<V()>&, std::size_t) {
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return std::make_shared<Amgx::AmgxPreconditioner<M, V, V>>(op.getmat(), prm);
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});
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}
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#endif
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#if HAVE_HYPRE
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// Only add Hypre for scalar matrices
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if constexpr (M::block_type::rows == 1 && M::block_type::cols == 1 &&
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