mirror of
https://github.com/OPM/opm-simulators.git
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Add flexible solver and preconditioner infrastructure.
Also use it in flow_blackoil_dunecpr.cpp. Adds new command-line parameter, --linear-solver-configuration-json-file, to read linear solver config from JSON-format file at runtime.
This commit is contained in:
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20
.clang-format
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20
.clang-format
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{
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BasedOnStyle: WebKit,
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AlignAfterOpenBracket: AlwaysBreak,
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AlignConsecutiveAssignments: false,
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AlignConsecutiveDeclarations: false,
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AlignAfterOpenBracket: Align,
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AllowShortBlocksOnASingleLine: false,
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AllowShortFunctionsOnASingleLine: None,
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AlwaysBreakAfterReturnType: TopLevelDefinitions,
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AlwaysBreakTemplateDeclarations: Yes,
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BinPackArguments: false,
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BinPackParameters: false,
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BreakBeforeBraces: Linux,
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BreakConstructorInitializers: BeforeComma,
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ColumnLimit: 120,
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Cpp11BracedListStyle: true,
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FixNamespaceComments: true,
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MaxEmptyLinesToKeep: 5,
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NamespaceIndentation: Inner,
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}
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@ -37,6 +37,7 @@ list (APPEND MAIN_SOURCE_FILES
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opm/core/wells/well_controls.c
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opm/core/wells/wells.c
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opm/simulators/linalg/ExtractParallelGridInformationToISTL.cpp
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opm/simulators/linalg/setupPropertyTree.cpp
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opm/simulators/timestepping/TimeStepControl.cpp
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opm/simulators/timestepping/AdaptiveSimulatorTimer.cpp
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opm/simulators/timestepping/SimulatorTimer.cpp
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@ -55,6 +56,7 @@ list (APPEND TEST_SOURCE_FILES
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tests/test_ecl_output.cc
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tests/test_blackoil_amg.cpp
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tests/test_convergencereport.cpp
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tests/test_flexiblesolver.cpp
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tests/test_graphcoloring.cpp
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tests/test_vfpproperties.cpp
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tests/test_milu.cpp
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@ -110,6 +112,9 @@ list (APPEND TEST_DATA_FILES
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tests/relpermDiagnostics.DATA
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tests/norne_pvt.data
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tests/wells_no_perforation.data
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tests/matr33.txt
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tests/rhs3.txt
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tests/options_flexiblesolver.json
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)
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@ -155,14 +160,23 @@ list (APPEND PUBLIC_HEADER_FILES
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opm/simulators/linalg/twolevelmethodcpr.hh
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opm/simulators/linalg/CPRPreconditioner.hpp
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opm/simulators/linalg/ExtractParallelGridInformationToISTL.hpp
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opm/simulators/linalg/FlexibleSolver.hpp
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opm/simulators/linalg/FlowLinearSolverParameters.hpp
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opm/simulators/linalg/GetQuasiImpesWeights.hpp
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opm/simulators/linalg/GraphColoring.hpp
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opm/simulators/linalg/ISTLSolverEbos.hpp
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opm/simulators/linalg/ISTLSolverEbosCpr.hpp
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opm/simulators/linalg/ISTLSolverEbosFlexible.hpp
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opm/simulators/linalg/MatrixBlock.hpp
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opm/simulators/linalg/MatrixMarketUtils.hpp
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opm/simulators/linalg/OwningTwolevelPreconditioner.hpp
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opm/simulators/linalg/ParallelOverlappingILU0.hpp
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opm/simulators/linalg/ParallelRestrictedAdditiveSchwarz.hpp
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opm/simulators/linalg/ParallelIstlInformation.hpp
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opm/simulators/linalg/PressureSolverPolicy.hpp
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opm/simulators/linalg/PressureTransferPolicy.hpp
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opm/simulators/linalg/makePreconditioner.hpp
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opm/simulators/linalg/setupPropertyTree.hpp
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opm/simulators/timestepping/AdaptiveSimulatorTimer.hpp
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opm/simulators/timestepping/AdaptiveTimeSteppingEbos.hpp
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opm/simulators/timestepping/ConvergenceReport.hpp
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@ -1,5 +1,5 @@
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/*
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Copyright 2013, 2014, 2015 SINTEF ICT, Applied Mathematics.
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Copyright 2013, 2014, 2015, 2019 SINTEF Digital, Mathematics and Cybernetics.
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Copyright 2014 Dr. Blatt - HPC-Simulation-Software & Services
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Copyright 2015, 2017 IRIS AS
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@ -21,7 +21,7 @@
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#include "config.h"
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#include "flow/flow_tag.hpp"
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//#include <opm/linearsolvers/amgclsolverbackend.hh>
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#include <opm/simulators/linalg/ISTLSolverEbosCpr.hpp>
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#include <opm/simulators/linalg/ISTLSolverEbosFlexible.hpp>
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//#include <ewoms/linear/superlubackend.hh>
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BEGIN_PROPERTIES
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@ -48,8 +48,8 @@ SET_PROP(EclFlowProblemSimple, FluidState)
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SET_BOOL_PROP(EclFlowProblemSimple,MatrixAddWellContributions,true);
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SET_INT_PROP(EclFlowProblemSimple,LinearSolverVerbosity,0);
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SET_SCALAR_PROP(EclFlowProblemSimple, LinearSolverReduction, 1e-4);
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SET_INT_PROP(EclFlowProblemSimple, LinearSolverMaxIter, 20);
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SET_SCALAR_PROP(EclFlowProblemSimple, LinearSolverReduction, 1e-2);
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SET_INT_PROP(EclFlowProblemSimple, LinearSolverMaxIter, 100);
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SET_BOOL_PROP(EclFlowProblemSimple, UseAmg, true);//probably not used
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SET_BOOL_PROP(EclFlowProblemSimple, UseCpr, true);
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SET_INT_PROP(EclFlowProblemSimple, CprMaxEllIter, 1);
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@ -79,7 +79,7 @@ namespace Ewoms {
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//SET_TYPE_PROP(EclFlowProblemSimple, LinearSolverBackend, Ewoms::Linear::ParallelBiCGStabSolverBackend<TypeTag>);//not work
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//SET_TYPE_PROP(EclFlowProblemSimple, LinearSolverBackend, Ewoms::Linear::SuperLUBackend<TypeTag>)//not work
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//SET_TAG_PROP(EclFlowProblem, FluidState, Opm::BlackOilFluidState);
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SET_TYPE_PROP(EclFlowProblemSimple, LinearSolverBackend, Opm::ISTLSolverEbosCpr<TypeTag>);
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SET_TYPE_PROP(EclFlowProblemSimple, LinearSolverBackend, Opm::ISTLSolverEbosFlexible<TypeTag>);
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SET_BOOL_PROP(EclFlowProblemSimple, EnableStorageCache, true);
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SET_BOOL_PROP(EclFlowProblemSimple, EnableIntensiveQuantityCache, true);
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115
opm/simulators/linalg/FlexibleSolver.hpp
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115
opm/simulators/linalg/FlexibleSolver.hpp
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/*
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Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
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This file is part of the Open Porous Media project (OPM).
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OPM is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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OPM is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with OPM. If not, see <http://www.gnu.org/licenses/>.
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*/
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#ifndef OPM_FLEXIBLE_SOLVER_HEADER_INCLUDED
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#define OPM_FLEXIBLE_SOLVER_HEADER_INCLUDED
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#include <opm/simulators/linalg/makePreconditioner.hpp>
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#include <dune/common/fmatrix.hh>
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#include <dune/istl/bcrsmatrix.hh>
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#include <dune/istl/solvers.hh>
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#include <dune/istl/umfpack.hh>
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#include <boost/property_tree/ptree.hpp>
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namespace Dune
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{
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template <class MatrixTypeT, class VectorTypeT>
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class FlexibleSolver : Dune::InverseOperator<VectorTypeT, VectorTypeT>
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{
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public:
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using MatrixType = MatrixTypeT;
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using VectorType = VectorTypeT;
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FlexibleSolver(const boost::property_tree::ptree& prm, const MatrixType& matrix)
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{
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makeSolver(prm, matrix);
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}
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virtual void apply(VectorType& x, VectorType& rhs, Dune::InverseOperatorResult& res) override
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{
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linsolver_->apply(x, rhs, res);
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}
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virtual void apply(VectorType& x, VectorType& rhs, double reduction, Dune::InverseOperatorResult& res) override
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{
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linsolver_->apply(x, rhs, reduction, res);
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}
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virtual Dune::SolverCategory::Category category() const override
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{
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return Dune::SolverCategory::sequential;
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}
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private:
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void makeSolver(const boost::property_tree::ptree& prm, const MatrixType& matrix)
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{
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const double tol = prm.get<double>("tol");
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const int maxiter = prm.get<int>("maxiter");
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linearoperator_.reset(new Dune::MatrixAdapter<MatrixType, VectorType, VectorType>(matrix));
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preconditioner_ = Dune::makePreconditioner<MatrixType, VectorType>(*linearoperator_, prm);
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int verbosity = prm.get<int>("verbosity");
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std::string solver_type = prm.get<std::string>("solver");
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if (solver_type == "bicgstab") {
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linsolver_.reset(new Dune::BiCGSTABSolver<VectorType>(*linearoperator_,
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*preconditioner_,
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tol, // desired residual reduction factor
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maxiter, // maximum number of iterations
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verbosity));
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} else if (solver_type == "loopsolver") {
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linsolver_.reset(new Dune::LoopSolver<VectorType>(*linearoperator_,
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*preconditioner_,
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tol, // desired residual reduction factor
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maxiter, // maximum number of iterations
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verbosity));
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} else if (solver_type == "gmres") {
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int restart = prm.get<int>("restart");
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linsolver_.reset(new Dune::RestartedGMResSolver<VectorType>(*linearoperator_,
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*preconditioner_,
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tol,
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restart, // desired residual reduction factor
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maxiter, // maximum number of iterations
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verbosity));
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#if HAVE_SUITESPARSE_UMFPACK
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} else if (solver_type == "umfpack") {
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bool dummy = false;
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linsolver_.reset(new Dune::UMFPack<MatrixType>(linearoperator_->getmat(), verbosity, dummy));
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#endif
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} else {
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std::string msg("Solver not known ");
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msg += solver_type;
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throw std::runtime_error(msg);
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}
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}
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std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>> preconditioner_;
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std::shared_ptr<Dune::MatrixAdapter<MatrixType, VectorType, VectorType>> linearoperator_;
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std::shared_ptr<Dune::InverseOperator<VectorType, VectorType>> linsolver_;
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};
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} // namespace Dune
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#endif // OPM_FLEXIBLE_SOLVER_HEADER_INCLUDED
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@ -66,6 +66,7 @@ NEW_PROP_TAG(CprUseDrs);
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NEW_PROP_TAG(CprMaxEllIter);
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NEW_PROP_TAG(CprEllSolvetype);
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NEW_PROP_TAG(CprReuseSetup);
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NEW_PROP_TAG(LinearSolverConfigurationJsonFile);
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SET_SCALAR_PROP(FlowIstlSolverParams, LinearSolverReduction, 1e-2);
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SET_SCALAR_PROP(FlowIstlSolverParams, IluRelaxation, 0.9);
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@ -90,6 +91,7 @@ SET_BOOL_PROP(FlowIstlSolverParams, CprUseDrs, false);
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SET_INT_PROP(FlowIstlSolverParams, CprMaxEllIter, 20);
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SET_INT_PROP(FlowIstlSolverParams, CprEllSolvetype, 0);
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SET_INT_PROP(FlowIstlSolverParams, CprReuseSetup, 0);
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SET_STRING_PROP(FlowIstlSolverParams, LinearSolverConfigurationJsonFile, "none");
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@ -160,6 +162,7 @@ namespace Opm
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bool use_cpr_;
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std::string system_strategy_;
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bool scale_linear_system_;
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std::string linear_solver_configuration_json_file_;
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template <class TypeTag>
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void init()
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@ -186,6 +189,7 @@ namespace Opm
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cpr_max_ell_iter_ = EWOMS_GET_PARAM(TypeTag, int, CprMaxEllIter);
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cpr_ell_solvetype_ = EWOMS_GET_PARAM(TypeTag, int, CprEllSolvetype);
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cpr_reuse_setup_ = EWOMS_GET_PARAM(TypeTag, int, CprReuseSetup);
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linear_solver_configuration_json_file_ = EWOMS_GET_PARAM(TypeTag, std::string, LinearSolverConfigurationJsonFile);
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}
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template <class TypeTag>
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@ -212,6 +216,7 @@ namespace Opm
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EWOMS_REGISTER_PARAM(TypeTag, int, CprMaxEllIter, "MaxIterations of the elliptic pressure part of the cpr solver");
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EWOMS_REGISTER_PARAM(TypeTag, int, CprEllSolvetype, "Solver type of elliptic pressure solve (0: bicgstab, 1: cg, 2: only amg preconditioner)");
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EWOMS_REGISTER_PARAM(TypeTag, int, CprReuseSetup, "Reuse Amg Setup");
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EWOMS_REGISTER_PARAM(TypeTag, std::string, LinearSolverConfigurationJsonFile, "Filename of JSON configuration for flexible linear solver system.");
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}
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FlowLinearSolverParameters() { reset(); }
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125
opm/simulators/linalg/ISTLSolverEbosFlexible.hpp
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125
opm/simulators/linalg/ISTLSolverEbosFlexible.hpp
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/*
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Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
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This file is part of the Open Porous Media project (OPM).
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OPM is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
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OPM is distributed in the hope that it will be useful,
|
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but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with OPM. If not, see <http://www.gnu.org/licenses/>.
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*/
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#ifndef OPM_ISTLSOLVEREBOSFLEXIBLE_HEADER_INCLUDED
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#define OPM_ISTLSOLVEREBOSFLEXIBLE_HEADER_INCLUDED
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#include <ewoms/linear/matrixblock.hh>
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#include <opm/simulators/linalg/FlexibleSolver.hpp>
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#include <opm/simulators/linalg/setupPropertyTree.hpp>
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#include <memory>
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#include <utility>
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BEGIN_PROPERTIES
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NEW_TYPE_TAG(FlowIstlSolverFlexible, INHERITS_FROM(FlowIstlSolverParams));
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NEW_PROP_TAG(LinearSolverConfiguration);
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NEW_PROP_TAG(GlobalEqVector);
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NEW_PROP_TAG(SparseMatrixAdapter);
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NEW_PROP_TAG(Simulator);
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END_PROPERTIES
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namespace Opm
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{
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//=====================================================================
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// Implementation for ISTL-matrix based operator
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//=====================================================================
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/// This class solves the fully implicit black-oil system by
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/// solving the reduced system (after eliminating well variables)
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/// as a block-structured matrix (one block for all cell variables) for a fixed
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/// number of cell variables.
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///
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/// The solvers and preconditioners used are run-time configurable.
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template <class TypeTag>
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class ISTLSolverEbosFlexible
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{
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using SparseMatrixAdapter = typename GET_PROP_TYPE(TypeTag, SparseMatrixAdapter);
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using VectorType = typename GET_PROP_TYPE(TypeTag, GlobalEqVector);
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using Simulator = typename GET_PROP_TYPE(TypeTag, Simulator);
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using MatrixType = typename SparseMatrixAdapter::IstlMatrix;
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using POrComm = Dune::Amg::SequentialInformation;
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using MatrixAdapterType = Dune::MatrixAdapter<MatrixType, VectorType, VectorType>;
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using SolverType = Dune::FlexibleSolver<MatrixType, VectorType>;
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public:
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static void registerParameters()
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{
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FlowLinearSolverParameters::registerParameters<TypeTag>();
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}
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explicit ISTLSolverEbosFlexible(const Simulator& simulator)
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: simulator_(simulator)
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{
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parameters_.template init<TypeTag>();
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}
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void eraseMatrix()
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{
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}
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void prepare(const SparseMatrixAdapter& mat, VectorType& b)
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{
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boost::property_tree::ptree prm = setupPropertyTree(parameters_);
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solver_.reset(new SolverType(prm, mat.istlMatrix()));
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rhs_ = b;
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}
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bool solve(VectorType& x)
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{
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solver_->apply(x, rhs_, res_);
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return res_.converged;
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}
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bool isParallel()
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{
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return false;
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}
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int iterations() const
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{
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return res_.iterations;
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}
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void setResidual(VectorType& /* b */)
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{
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// rhs_ = &b; // Must be handled in prepare() instead.
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}
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void setMatrix(const SparseMatrixAdapter& /* M */)
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{
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// matrix_ = &M.istlMatrix(); // Must be handled in prepare() instead.
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}
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protected:
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const Simulator& simulator_;
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std::unique_ptr<SolverType> solver_;
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FlowLinearSolverParameters parameters_;
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VectorType rhs_;
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Dune::InverseOperatorResult res_;
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}; // end ISTLSolverEbosFlexible
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} // namespace Opm
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#endif // OPM_ISTLSOLVEREBOSFLEXIBLE_HEADER_INCLUDED
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100
opm/simulators/linalg/MatrixMarketUtils.hpp
Normal file
100
opm/simulators/linalg/MatrixMarketUtils.hpp
Normal file
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@ -0,0 +1,100 @@
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/*
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Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
Copyright 2019 Dr. Blatt - HPC-Simulation-Software & Services.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
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|
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#ifndef OPM_MATRIXMARKETUTILS_HEADER_INCLUDED
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#define OPM_MATRIXMARKETUTILS_HEADER_INCLUDED
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|
||||
#include <dune/istl/matrixmarket.hh>
|
||||
#include <cstddef>
|
||||
|
||||
namespace Dune
|
||||
{
|
||||
|
||||
namespace MatrixMarketImpl
|
||||
{
|
||||
template <typename T, typename A, int brows, int bcols, typename D>
|
||||
void makeSparseEntries(Dune::BCRSMatrix<Dune::FieldMatrix<T, brows, bcols>, A>& matrix,
|
||||
std::vector<int>& i,
|
||||
std::vector<int>& j,
|
||||
std::vector<double>& val,
|
||||
const D&)
|
||||
{
|
||||
// addapted from readSparseEntries
|
||||
typedef Dune::BCRSMatrix<Dune::FieldMatrix<T, brows, bcols>, A> Matrix;
|
||||
std::vector<std::set<IndexData<D>>> rows(matrix.N() * brows);
|
||||
for (std::size_t kk = 0; kk < i.size(); ++kk) {
|
||||
std::size_t row;
|
||||
IndexData<D> data;
|
||||
row = i[kk];
|
||||
assert(row / bcols < matrix.N());
|
||||
data.number = val[kk];
|
||||
data.index = j[kk];
|
||||
assert(data.index / bcols < matrix.M());
|
||||
rows[row].insert(data);
|
||||
}
|
||||
|
||||
// Setup the matrix sparsity pattern
|
||||
int nnz = 0;
|
||||
for (typename Matrix::CreateIterator iter = matrix.createbegin(); iter != matrix.createend(); ++iter) {
|
||||
for (std::size_t brow = iter.index() * brows, browend = iter.index() * brows + brows; brow < browend;
|
||||
++brow) {
|
||||
typedef typename std::set<IndexData<D>>::const_iterator Siter;
|
||||
for (Siter siter = rows[brow].begin(), send = rows[brow].end(); siter != send; ++siter, ++nnz)
|
||||
iter.insert(siter->index / bcols);
|
||||
}
|
||||
}
|
||||
|
||||
// Set the matrix values
|
||||
matrix = 0;
|
||||
|
||||
MatrixValuesSetter<D, brows, bcols> Setter;
|
||||
|
||||
Setter(rows, matrix);
|
||||
}
|
||||
} // end namespace MatrixMarketImpl
|
||||
|
||||
|
||||
template <typename T, typename A, int brows, int bcols>
|
||||
void
|
||||
makeMatrixMarket(Dune::BCRSMatrix<Dune::FieldMatrix<T, brows, bcols>, A>& matrix,
|
||||
std::vector<int> i,
|
||||
std::vector<int> j,
|
||||
std::vector<T> val,
|
||||
size_t rows,
|
||||
size_t cols)
|
||||
{
|
||||
// addapted from readMatrixMarket
|
||||
using namespace MatrixMarketImpl;
|
||||
// std::size_t rows, cols, entries;
|
||||
// std::size_t nnz, blockrows, blockcols;
|
||||
// std::tie(blockrows, blockcols, nnz) = calculateNNZ<brows, bcols>(rows, cols, entries, header);
|
||||
std::size_t blockrows = rows / brows;
|
||||
std::size_t blockcols = cols / bcols;
|
||||
matrix.setSize(blockrows, blockcols);
|
||||
matrix.setBuildMode(Dune::BCRSMatrix<Dune::FieldMatrix<T, brows, bcols>, A>::row_wise);
|
||||
makeSparseEntries(matrix, i, j, val, NumericWrapper<T>());
|
||||
}
|
||||
|
||||
|
||||
} // end namespace Dune
|
||||
|
||||
|
||||
|
||||
#endif // OPM_MATRIXMARKETUTILS_HEADER_INCLUDED
|
123
opm/simulators/linalg/OwningTwoLevelPreconditioner.hpp
Normal file
123
opm/simulators/linalg/OwningTwoLevelPreconditioner.hpp
Normal file
|
@ -0,0 +1,123 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#ifndef OPM_OWNINGTWOLEVELPRECONDITIONER_HEADER_INCLUDED
|
||||
#define OPM_OWNINGTWOLEVELPRECONDITIONER_HEADER_INCLUDED
|
||||
|
||||
#include <opm/simulators/linalg/PressureSolverPolicy.hpp>
|
||||
#include <opm/simulators/linalg/PressureTransferPolicy.hpp>
|
||||
#include <opm/simulators/linalg/getQuasiImpesWeights.hpp>
|
||||
|
||||
#include <dune/common/fmatrix.hh>
|
||||
#include <dune/istl/bcrsmatrix.hh>
|
||||
#include <dune/istl/paamg/amg.hh>
|
||||
|
||||
#include <boost/property_tree/ptree.hpp>
|
||||
|
||||
#include <fstream>
|
||||
|
||||
namespace Dune
|
||||
{
|
||||
|
||||
// Circular dependency between makePreconditioner() [which can make an OwningTwoLevelPreconditioner]
|
||||
// and OwningTwoLevelPreconditioner [which uses makePreconditioner() to choose the fine-level smoother]
|
||||
// must be broken, accomplished by forward-declaration here.
|
||||
template <class MatrixType, class VectorType>
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>>
|
||||
makePreconditioner(const Dune::MatrixAdapter<MatrixType, VectorType, VectorType>& linearoperator,
|
||||
const boost::property_tree::ptree& prm);
|
||||
|
||||
// Must forward-declare FlexibleSolver as we want to use it as solver for the pressure system.
|
||||
template <class MatrixTypeT, class VectorTypeT>
|
||||
class FlexibleSolver;
|
||||
|
||||
template <class MatrixTypeT, class VectorTypeT, bool transpose = false>
|
||||
class OwningTwoLevelPreconditioner : public Dune::Preconditioner<VectorTypeT, VectorTypeT>
|
||||
{
|
||||
public:
|
||||
using pt = boost::property_tree::ptree;
|
||||
using MatrixType = MatrixTypeT;
|
||||
using VectorType = VectorTypeT;
|
||||
using OperatorType = Dune::MatrixAdapter<MatrixType, VectorType, VectorType>;
|
||||
|
||||
OwningTwoLevelPreconditioner(OperatorType& linearoperator, pt& prm)
|
||||
: finesmoother_(makePreconditioner<MatrixType, VectorType>(linearoperator, prm.get_child("finesmoother")))
|
||||
, comm_()
|
||||
, weights_(Opm::Amg::getQuasiImpesWeights<MatrixType, VectorType>(
|
||||
linearoperator.getmat(), prm.get<int>("pressure_var_index"), transpose))
|
||||
, levelTransferPolicy_(comm_, weights_, prm.get<int>("pressure_var_index"))
|
||||
, coarseSolverPolicy_(prm.get_child("coarsesolver"))
|
||||
, twolevel_method_(linearoperator,
|
||||
finesmoother_,
|
||||
levelTransferPolicy_,
|
||||
coarseSolverPolicy_,
|
||||
transpose ? 1 : 0,
|
||||
transpose ? 0 : 1)
|
||||
{
|
||||
if (prm.get<int>("verbosity") > 10) {
|
||||
std::ofstream outfile(prm.get<std::string>("weights_filename"));
|
||||
if (!outfile) {
|
||||
throw std::runtime_error("Could not write weights");
|
||||
}
|
||||
Dune::writeMatrixMarket(weights_, outfile);
|
||||
}
|
||||
}
|
||||
|
||||
virtual void pre(VectorType& x, VectorType& b) override
|
||||
{
|
||||
twolevel_method_.pre(x, b);
|
||||
}
|
||||
virtual void apply(VectorType& v, const VectorType& d) override
|
||||
{
|
||||
twolevel_method_.apply(v, d);
|
||||
}
|
||||
virtual void post(VectorType& x) override
|
||||
{
|
||||
twolevel_method_.post(x);
|
||||
}
|
||||
virtual Dune::SolverCategory::Category category() const override
|
||||
{
|
||||
return Dune::SolverCategory::sequential;
|
||||
}
|
||||
|
||||
private:
|
||||
using PressureMatrixType = Dune::BCRSMatrix<Dune::FieldMatrix<double, 1, 1>>;
|
||||
using PressureVectorType = Dune::BlockVector<Dune::FieldVector<double, 1>>;
|
||||
using CoarseOperatorType = Dune::MatrixAdapter<PressureMatrixType, PressureVectorType, PressureVectorType>;
|
||||
using Communication = Dune::Amg::SequentialInformation;
|
||||
using LevelTransferPolicy = Opm::PressureTransferPolicy<OperatorType, CoarseOperatorType, Communication, transpose>;
|
||||
using CoarseSolverPolicy
|
||||
= Dune::Amg::PressureSolverPolicy<CoarseOperatorType, FlexibleSolver<PressureMatrixType, PressureVectorType>>;
|
||||
using TwoLevelMethod
|
||||
= Dune::Amg::TwoLevelMethod<OperatorType, CoarseSolverPolicy, Dune::Preconditioner<VectorType, VectorType>>;
|
||||
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>> finesmoother_;
|
||||
Communication comm_;
|
||||
VectorType weights_;
|
||||
LevelTransferPolicy levelTransferPolicy_;
|
||||
CoarseSolverPolicy coarseSolverPolicy_;
|
||||
TwoLevelMethod twolevel_method_;
|
||||
};
|
||||
|
||||
} // namespace Dune
|
||||
|
||||
|
||||
|
||||
|
||||
#endif // OPM_OWNINGTWOLEVELPRECONDITIONER_HEADER_INCLUDED
|
114
opm/simulators/linalg/PressureSolverPolicy.hpp
Normal file
114
opm/simulators/linalg/PressureSolverPolicy.hpp
Normal file
|
@ -0,0 +1,114 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#ifndef OPM_PRESSURE_SOLVER_POLICY_HEADER_INCLUDED
|
||||
#define OPM_PRESSURE_SOLVER_POLICY_HEADER_INCLUDED
|
||||
|
||||
#include <boost/property_tree/ptree.hpp>
|
||||
|
||||
#include <dune/istl/solver.hh>
|
||||
|
||||
namespace Dune
|
||||
{
|
||||
namespace Amg
|
||||
{
|
||||
namespace pt = boost::property_tree;
|
||||
|
||||
template <class OperatorType, class Solver>
|
||||
class PressureSolverPolicy
|
||||
{
|
||||
public:
|
||||
/** @brief The type of the linear operator used. */
|
||||
using Operator = OperatorType;
|
||||
/**
|
||||
* @brief Constructs the coarse solver policy.
|
||||
* @param prm Parameter tree specifying the solver details.
|
||||
*/
|
||||
explicit PressureSolverPolicy(const pt::ptree prm)
|
||||
: prm_(prm)
|
||||
{
|
||||
}
|
||||
|
||||
private:
|
||||
using X = typename Operator::range_type;
|
||||
/**
|
||||
* @brief A wrapper that makes an inverse operator out of AMG.
|
||||
*
|
||||
* The operator will use one step of AMG to approximately solve
|
||||
* the coarse level system.
|
||||
*/
|
||||
struct PressureInverseOperator : public Dune::InverseOperator<X, X> {
|
||||
PressureInverseOperator(Operator& op, const boost::property_tree::ptree& prm)
|
||||
: linsolver_()
|
||||
{
|
||||
linsolver_.reset(new Solver(prm, op.getmat()));
|
||||
}
|
||||
|
||||
Dune::SolverCategory::Category category() const override
|
||||
{
|
||||
return Dune::SolverCategory::sequential;
|
||||
}
|
||||
|
||||
void apply(X& x, X& b, double reduction, Dune::InverseOperatorResult& res) override
|
||||
{
|
||||
linsolver_->apply(x, b, reduction, res);
|
||||
}
|
||||
|
||||
void apply(X& x, X& b, Dune::InverseOperatorResult& res) override
|
||||
{
|
||||
linsolver_->apply(x, b, res);
|
||||
}
|
||||
|
||||
private:
|
||||
std::shared_ptr<Solver> linsolver_;
|
||||
};
|
||||
|
||||
public:
|
||||
/** @brief The type of solver constructed for the coarse level. */
|
||||
using CoarseLevelSolver = PressureInverseOperator;
|
||||
|
||||
/**
|
||||
* @brief Constructs a coarse level solver.
|
||||
*
|
||||
* @param transferPolicy The policy describing the transfer between levels.
|
||||
* @return A pointer to the constructed coarse level solver.
|
||||
*/
|
||||
template <class LTP>
|
||||
void setCoarseOperator(LTP& transferPolicy)
|
||||
{
|
||||
coarseOperator_ = transferPolicy.getCoarseLevelOperator();
|
||||
}
|
||||
template <class LTP>
|
||||
CoarseLevelSolver* createCoarseLevelSolver(LTP& transferPolicy)
|
||||
{
|
||||
coarseOperator_ = transferPolicy.getCoarseLevelOperator();
|
||||
PressureInverseOperator* inv = new PressureInverseOperator(*coarseOperator_, prm_);
|
||||
return inv;
|
||||
}
|
||||
|
||||
private:
|
||||
/** @brief The coarse level operator. */
|
||||
std::shared_ptr<Operator> coarseOperator_;
|
||||
pt::ptree prm_;
|
||||
};
|
||||
} // namespace Amg
|
||||
} // namespace Dune
|
||||
|
||||
|
||||
#endif // OPM_PRESSURE_SOLVER_POLICY_HEADER_INCLUDED
|
158
opm/simulators/linalg/PressureTransferPolicy.hpp
Normal file
158
opm/simulators/linalg/PressureTransferPolicy.hpp
Normal file
|
@ -0,0 +1,158 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
Copyright 2019 Dr. Blatt - HPC-Simulation-Software & Services.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#ifndef OPM_PRESSURE_TRANSFER_POLICY_HEADER_INCLUDED
|
||||
#define OPM_PRESSURE_TRANSFER_POLICY_HEADER_INCLUDED
|
||||
|
||||
|
||||
#include <dune/istl/paamg/twolevelmethod.hh>
|
||||
|
||||
|
||||
namespace Opm
|
||||
{
|
||||
|
||||
template <class FineOperator, class CoarseOperator, class Communication, bool transpose = false>
|
||||
class PressureTransferPolicy : public Dune::Amg::LevelTransferPolicy<FineOperator, CoarseOperator>
|
||||
{
|
||||
public:
|
||||
typedef Dune::Amg::LevelTransferPolicy<FineOperator, CoarseOperator> FatherType;
|
||||
typedef Communication ParallelInformation;
|
||||
typedef typename FineOperator::domain_type FineVectorType;
|
||||
|
||||
public:
|
||||
PressureTransferPolicy(const Communication& comm, const FineVectorType& weights, int pressure_var_index)
|
||||
: communication_(&const_cast<Communication&>(comm))
|
||||
, weights_(weights)
|
||||
, pressure_var_index_(pressure_var_index)
|
||||
{
|
||||
}
|
||||
|
||||
void createCoarseLevelSystem(const FineOperator& fineOperator)
|
||||
{
|
||||
using CoarseMatrix = typename CoarseOperator::matrix_type;
|
||||
const auto& fineLevelMatrix = fineOperator.getmat();
|
||||
coarseLevelMatrix_.reset(new CoarseMatrix(fineLevelMatrix.N(), fineLevelMatrix.M(), CoarseMatrix::row_wise));
|
||||
auto createIter = coarseLevelMatrix_->createbegin();
|
||||
|
||||
for (const auto& row : fineLevelMatrix) {
|
||||
for (auto col = row.begin(), cend = row.end(); col != cend; ++col) {
|
||||
createIter.insert(col.index());
|
||||
}
|
||||
++createIter;
|
||||
}
|
||||
|
||||
calculateCoarseEntries(fineOperator);
|
||||
coarseLevelCommunication_.reset(communication_, [](Communication*) {});
|
||||
|
||||
this->lhs_.resize(this->coarseLevelMatrix_->M());
|
||||
this->rhs_.resize(this->coarseLevelMatrix_->N());
|
||||
using OperatorArgs = typename Dune::Amg::ConstructionTraits<CoarseOperator>::Arguments;
|
||||
OperatorArgs oargs(*coarseLevelMatrix_, *coarseLevelCommunication_);
|
||||
this->operator_.reset(Dune::Amg::ConstructionTraits<CoarseOperator>::construct(oargs));
|
||||
}
|
||||
|
||||
void calculateCoarseEntries(const FineOperator& fineOperator)
|
||||
{
|
||||
const auto& fineMatrix = fineOperator.getmat();
|
||||
*coarseLevelMatrix_ = 0;
|
||||
auto rowCoarse = coarseLevelMatrix_->begin();
|
||||
for (auto row = fineMatrix.begin(), rowEnd = fineMatrix.end(); row != rowEnd; ++row, ++rowCoarse) {
|
||||
assert(row.index() == rowCoarse.index());
|
||||
auto entryCoarse = rowCoarse->begin();
|
||||
for (auto entry = row->begin(), entryEnd = row->end(); entry != entryEnd; ++entry, ++entryCoarse) {
|
||||
assert(entry.index() == entryCoarse.index());
|
||||
double matrix_el = 0;
|
||||
if (transpose) {
|
||||
auto bw = weights_[entry.index()];
|
||||
for (size_t i = 0; i < bw.size(); ++i) {
|
||||
matrix_el += (*entry)[pressure_var_index_][i] * bw[i];
|
||||
}
|
||||
} else {
|
||||
auto bw = weights_[row.index()];
|
||||
for (size_t i = 0; i < bw.size(); ++i) {
|
||||
matrix_el += (*entry)[i][pressure_var_index_] * bw[i];
|
||||
}
|
||||
}
|
||||
(*entryCoarse) = matrix_el;
|
||||
}
|
||||
}
|
||||
assert(rowCoarse == coarseLevelMatrix_->end());
|
||||
}
|
||||
|
||||
void moveToCoarseLevel(const typename FatherType::FineRangeType& fine)
|
||||
{
|
||||
// Set coarse vector to zero
|
||||
this->rhs_ = 0;
|
||||
|
||||
auto end = fine.end(), begin = fine.begin();
|
||||
|
||||
for (auto block = begin; block != end; ++block) {
|
||||
auto bw = weights_[block.index()];
|
||||
double rhs_el = 0.0;
|
||||
if (transpose) {
|
||||
rhs_el = (*block)[pressure_var_index_];
|
||||
} else {
|
||||
for (size_t i = 0; i < block->size(); ++i) {
|
||||
rhs_el += (*block)[i] * bw[i];
|
||||
}
|
||||
}
|
||||
this->rhs_[block - begin] = rhs_el;
|
||||
}
|
||||
|
||||
this->lhs_ = 0;
|
||||
}
|
||||
|
||||
void moveToFineLevel(typename FatherType::FineDomainType& fine)
|
||||
{
|
||||
auto end = fine.end(), begin = fine.begin();
|
||||
|
||||
for (auto block = begin; block != end; ++block) {
|
||||
if (transpose) {
|
||||
auto bw = weights_[block.index()];
|
||||
for (size_t i = 0; i < block->size(); ++i) {
|
||||
(*block)[i] = this->lhs_[block - begin] * bw[i];
|
||||
}
|
||||
} else {
|
||||
(*block)[pressure_var_index_] = this->lhs_[block - begin];
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
PressureTransferPolicy* clone() const
|
||||
{
|
||||
return new PressureTransferPolicy(*this);
|
||||
}
|
||||
|
||||
const Communication& getCoarseLevelCommunication() const
|
||||
{
|
||||
return *coarseLevelCommunication_;
|
||||
}
|
||||
|
||||
private:
|
||||
Communication* communication_;
|
||||
const FineVectorType& weights_;
|
||||
const int pressure_var_index_;
|
||||
std::shared_ptr<Communication> coarseLevelCommunication_;
|
||||
std::shared_ptr<typename CoarseOperator::matrix_type> coarseLevelMatrix_;
|
||||
};
|
||||
|
||||
} // namespace Opm
|
||||
|
||||
#endif // OPM_PRESSURE_TRANSFER_POLICY_HEADER_INCLUDED
|
90
opm/simulators/linalg/getQuasiImpesWeights.hpp
Normal file
90
opm/simulators/linalg/getQuasiImpesWeights.hpp
Normal file
|
@ -0,0 +1,90 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#ifndef OPM_GET_QUASI_IMPES_WEIGHTS_HEADER_INCLUDED
|
||||
#define OPM_GET_QUASI_IMPES_WEIGHTS_HEADER_INCLUDED
|
||||
|
||||
#include <algorithm>
|
||||
#include <cmath>
|
||||
|
||||
namespace Opm
|
||||
{
|
||||
|
||||
namespace Details
|
||||
{
|
||||
template <class DenseMatrix>
|
||||
DenseMatrix transposeDenseMatrix(const DenseMatrix& M)
|
||||
{
|
||||
DenseMatrix tmp;
|
||||
for (int i = 0; i < M.rows; ++i)
|
||||
for (int j = 0; j < M.cols; ++j)
|
||||
tmp[j][i] = M[i][j];
|
||||
|
||||
return tmp;
|
||||
}
|
||||
} // namespace Details
|
||||
|
||||
namespace Amg
|
||||
{
|
||||
template <class Matrix, class Vector>
|
||||
void getQuasiImpesWeights(const Matrix& matrix, const int pressureVarIndex, Vector& weights, bool transpose = false)
|
||||
{
|
||||
using VectorBlockType = typename Vector::block_type;
|
||||
using MatrixBlockType = typename Matrix::block_type;
|
||||
const Matrix& A = matrix;
|
||||
VectorBlockType rhs(0.0);
|
||||
rhs[pressureVarIndex] = 1.0;
|
||||
const auto endi = A.end();
|
||||
for (auto i = A.begin(); i != endi; ++i) {
|
||||
const auto endj = (*i).end();
|
||||
MatrixBlockType diag_block(0.0);
|
||||
for (auto j = (*i).begin(); j != endj; ++j) {
|
||||
if (i.index() == j.index()) {
|
||||
diag_block = (*j);
|
||||
break;
|
||||
}
|
||||
}
|
||||
VectorBlockType bweights;
|
||||
if (transpose) {
|
||||
diag_block.solve(bweights, rhs);
|
||||
} else {
|
||||
auto diag_block_transpose = Opm::Details::transposeDenseMatrix(diag_block);
|
||||
diag_block_transpose.solve(bweights, rhs);
|
||||
}
|
||||
double abs_max = *std::max_element(
|
||||
bweights.begin(), bweights.end(), [](double a, double b) { return std::fabs(a) < std::fabs(b); });
|
||||
bweights /= std::fabs(abs_max);
|
||||
weights[i.index()] = bweights;
|
||||
}
|
||||
// return weights;
|
||||
}
|
||||
|
||||
template <class Matrix, class Vector>
|
||||
Vector getQuasiImpesWeights(const Matrix& matrix, const int pressureVarIndex, bool transpose = false)
|
||||
{
|
||||
Vector weights(matrix.N());
|
||||
getQuasiImpesWeights(matrix, pressureVarIndex, weights, transpose);
|
||||
return weights;
|
||||
}
|
||||
|
||||
} // namespace Amg
|
||||
|
||||
} // namespace Opm
|
||||
|
||||
#endif // OPM_GET_QUASI_IMPES_WEIGHTS_HEADER_INCLUDED
|
193
opm/simulators/linalg/makePreconditioner.hpp
Normal file
193
opm/simulators/linalg/makePreconditioner.hpp
Normal file
|
@ -0,0 +1,193 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#ifndef OPM_MAKEPRECONDITIONER_HEADER_INCLUDED
|
||||
#define OPM_MAKEPRECONDITIONER_HEADER_INCLUDED
|
||||
|
||||
#include <opm/simulators/linalg/OwningTwoLevelPreconditioner.hpp>
|
||||
#include <opm/simulators/linalg/ParallelOverlappingILU0.hpp>
|
||||
|
||||
#include <dune/istl/paamg/amg.hh>
|
||||
#include <dune/istl/paamg/fastamg.hh>
|
||||
#include <dune/istl/preconditioners.hh>
|
||||
|
||||
#include <boost/property_tree/ptree.hpp>
|
||||
|
||||
namespace Dune
|
||||
{
|
||||
|
||||
template <class MatrixType, class VectorType>
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>>
|
||||
makeSeqPreconditioner(const Dune::MatrixAdapter<MatrixType, VectorType, VectorType>& linearoperator,
|
||||
const boost::property_tree::ptree& prm)
|
||||
{
|
||||
auto& matrix = linearoperator.getmat();
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>> preconditioner;
|
||||
double w = prm.get<double>("w");
|
||||
int n = prm.get<int>("n");
|
||||
std::string precond(prm.get<std::string>("preconditioner"));
|
||||
if (precond == "ILU0") {
|
||||
preconditioner.reset(new Dune::SeqILU0<MatrixType, VectorType, VectorType>(matrix, w));
|
||||
} else if (precond == "ParOverILU0") {
|
||||
preconditioner.reset(new Opm::ParallelOverlappingILU0<MatrixType, VectorType, VectorType>(matrix, n, w, Opm::MILU_VARIANT::ILU));
|
||||
} else if (precond == "Jac") {
|
||||
preconditioner.reset(new Dune::SeqJac<MatrixType, VectorType, VectorType>(matrix, n, w));
|
||||
} else if (precond == "GS") {
|
||||
preconditioner.reset(new Dune::SeqGS<MatrixType, VectorType, VectorType>(matrix, n, w));
|
||||
} else if (precond == "SOR") {
|
||||
preconditioner.reset(new Dune::SeqSOR<MatrixType, VectorType, VectorType>(matrix, n, w));
|
||||
} else if (precond == "SSOR") {
|
||||
preconditioner.reset(new Dune::SeqSSOR<MatrixType, VectorType, VectorType>(matrix, n, w));
|
||||
} else if (precond == "ILUn") {
|
||||
preconditioner.reset(new Dune::SeqILUn<MatrixType, VectorType, VectorType>(matrix, n, w));
|
||||
} else {
|
||||
std::string msg("No such seq preconditioner : ");
|
||||
msg += precond;
|
||||
throw std::runtime_error(msg);
|
||||
}
|
||||
return preconditioner;
|
||||
}
|
||||
|
||||
template <class Smoother, class MatrixType, class VectorType>
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>>
|
||||
makeAmgPreconditioner(Dune::MatrixAdapter<MatrixType, VectorType, VectorType>& linearoperator,
|
||||
const boost::property_tree::ptree& global_prm)
|
||||
{
|
||||
boost::property_tree::ptree prm = global_prm.get_child("amg");
|
||||
typedef Dune::MatrixAdapter<MatrixType, VectorType, VectorType> OperatorType;
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>> preconditioner;
|
||||
typedef Dune::Amg::AggregationCriterion<Dune::Amg::SymmetricMatrixDependency<MatrixType, Dune::Amg::FirstDiagonal>>
|
||||
CriterionBase;
|
||||
typedef Dune::Amg::CoarsenCriterion<CriterionBase> Criterion;
|
||||
int coarsenTarget = prm.get<int>("coarsenTarget");
|
||||
int ml = prm.get<int>("maxlevel");
|
||||
Criterion criterion(15, coarsenTarget);
|
||||
criterion.setDefaultValuesIsotropic(2);
|
||||
criterion.setAlpha(prm.get<double>("alpha"));
|
||||
criterion.setBeta(prm.get<double>("beta"));
|
||||
criterion.setMaxLevel(ml);
|
||||
criterion.setSkipIsolated(false);
|
||||
criterion.setDebugLevel(prm.get<int>("verbosity"));
|
||||
if (global_prm.get<std::string>("preconditioner") == "famg") {
|
||||
Dune::Amg::Parameters parms;
|
||||
parms.setNoPreSmoothSteps(1);
|
||||
parms.setNoPostSmoothSteps(1);
|
||||
preconditioner.reset(new Dune::Amg::FastAMG<OperatorType, VectorType>(linearoperator, criterion, parms));
|
||||
} else {
|
||||
typedef typename Dune::Amg::SmootherTraits<Smoother>::Arguments SmootherArgs;
|
||||
SmootherArgs smootherArgs;
|
||||
smootherArgs.iterations = prm.get<int>("n");
|
||||
// smootherArgs.overlap=SmootherArgs::vertex;
|
||||
// smootherArgs.overlap=SmootherArgs::none;
|
||||
// smootherArgs.overlap=SmootherArgs::aggregate;
|
||||
smootherArgs.relaxationFactor = prm.get<double>("w");
|
||||
preconditioner.reset(
|
||||
new Dune::Amg::AMG<OperatorType, VectorType, Smoother>(linearoperator, criterion, smootherArgs));
|
||||
}
|
||||
return preconditioner;
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
template <class MatrixType, class VectorType>
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>>
|
||||
makeAmgPreconditioners(Dune::MatrixAdapter<MatrixType, VectorType, VectorType>& linearoperator,
|
||||
const boost::property_tree::ptree& prm)
|
||||
{
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>> preconditioner;
|
||||
if (prm.get<std::string>("preconditioner") == "famg") {
|
||||
// smoother type should not be used
|
||||
preconditioner
|
||||
= makeAmgPreconditioner<Dune::SeqILU0<MatrixType, VectorType, VectorType>, MatrixType, VectorType>(
|
||||
linearoperator, prm);
|
||||
return preconditioner;
|
||||
}
|
||||
|
||||
std::string precond = prm.get<std::string>("amg.smoother");
|
||||
if (precond == "ILU0") {
|
||||
preconditioner
|
||||
= makeAmgPreconditioner<Dune::SeqILU0<MatrixType, VectorType, VectorType>, MatrixType, VectorType>(
|
||||
linearoperator, prm);
|
||||
} else if (precond == "Jac") {
|
||||
preconditioner
|
||||
= makeAmgPreconditioner<Dune::SeqJac<MatrixType, VectorType, VectorType>, MatrixType, VectorType>(
|
||||
linearoperator, prm);
|
||||
// }else if(precond == "GS"){
|
||||
// preconditioner = makeAmgPreconditioner<
|
||||
// Dune::SeqGS<MatrixType, VectorType, VectorType>,
|
||||
// MatrixType, VectorType>(linearoperator,prm);
|
||||
} else if (precond == "SOR") {
|
||||
preconditioner
|
||||
= makeAmgPreconditioner<Dune::SeqSOR<MatrixType, VectorType, VectorType>, MatrixType, VectorType>(
|
||||
linearoperator, prm);
|
||||
} else if (precond == "SSOR") {
|
||||
preconditioner
|
||||
= makeAmgPreconditioner<Dune::SeqSSOR<MatrixType, VectorType, VectorType>, MatrixType, VectorType>(
|
||||
linearoperator, prm);
|
||||
} else if (precond == "ILUn") {
|
||||
preconditioner
|
||||
= makeAmgPreconditioner<Dune::SeqILUn<MatrixType, VectorType, VectorType>, MatrixType, VectorType>(
|
||||
linearoperator, prm);
|
||||
} else {
|
||||
std::string msg("No such seq preconditioner : ");
|
||||
msg += precond;
|
||||
throw std::runtime_error(msg);
|
||||
}
|
||||
return preconditioner;
|
||||
}
|
||||
|
||||
template <class MatrixType, class VectorType>
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>>
|
||||
makeTwoLevelPreconditioner(Dune::MatrixAdapter<MatrixType, VectorType, VectorType>& linearoperator,
|
||||
const boost::property_tree::ptree& global_prm)
|
||||
{
|
||||
boost::property_tree::ptree prm = global_prm.get_child("cpr");
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>> preconditioner;
|
||||
if (global_prm.get<std::string>("preconditioner") == "cpr") {
|
||||
preconditioner.reset(new OwningTwoLevelPreconditioner<MatrixType, VectorType, false>(linearoperator, prm));
|
||||
} else if (global_prm.get<std::string>("preconditioner") == "cprt") {
|
||||
preconditioner.reset(new OwningTwoLevelPreconditioner<MatrixType, VectorType, true>(linearoperator, prm));
|
||||
} else {
|
||||
std::string msg("Wrong cpr Should not happen");
|
||||
throw std::runtime_error(msg);
|
||||
}
|
||||
return preconditioner;
|
||||
}
|
||||
|
||||
template <class MatrixType, class VectorType>
|
||||
std::shared_ptr<Dune::Preconditioner<VectorType, VectorType>>
|
||||
makePreconditioner(Dune::MatrixAdapter<MatrixType, VectorType, VectorType>& linearoperator,
|
||||
const boost::property_tree::ptree& prm)
|
||||
{
|
||||
if ((prm.get<std::string>("preconditioner") == "famg") or (prm.get<std::string>("preconditioner") == "amg")) {
|
||||
return makeAmgPreconditioners<MatrixType, VectorType>(linearoperator, prm);
|
||||
} else if ((prm.get<std::string>("preconditioner") == "cpr")
|
||||
or (prm.get<std::string>("preconditioner") == "cprt")) {
|
||||
return makeTwoLevelPreconditioner<MatrixType, VectorType>(linearoperator, prm);
|
||||
} else {
|
||||
return makeSeqPreconditioner<MatrixType, VectorType>(linearoperator, prm);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
} // namespace Dune
|
||||
|
||||
|
||||
#endif // OPM_MAKEPRECONDITIONER_HEADER_INCLUDED
|
115
opm/simulators/linalg/setupPropertyTree.cpp
Normal file
115
opm/simulators/linalg/setupPropertyTree.cpp
Normal file
|
@ -0,0 +1,115 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#include <opm/simulators/linalg/setupPropertyTree.hpp>
|
||||
|
||||
#include <boost/property_tree/json_parser.hpp>
|
||||
|
||||
namespace Opm
|
||||
{
|
||||
|
||||
boost::property_tree::ptree setupPropertyTree(const FlowLinearSolverParameters& p)
|
||||
{
|
||||
boost::property_tree::ptree prm;
|
||||
if (p.linear_solver_configuration_json_file_ != "none") {
|
||||
boost::property_tree::read_json(p.linear_solver_configuration_json_file_, prm);
|
||||
} else {
|
||||
prm.put("tol", p.linear_solver_reduction_);
|
||||
prm.put("maxiter", p.linear_solver_maxiter_);
|
||||
prm.put("verbosity", p.linear_solver_verbosity_);
|
||||
prm.put("preconditioner", "ILU0");
|
||||
prm.put("solver", "bicgstab");
|
||||
prm.put("w", 1.0);
|
||||
prm.put("n", 1);
|
||||
}
|
||||
|
||||
/*
|
||||
prm.put("tol", 0.5);
|
||||
prm.put("maxiter", 20);
|
||||
prm.put("preconditioner", "cpr");
|
||||
prm.put("w", 1);
|
||||
prm.put("n", 1);
|
||||
prm.put("cpr.finesmoother.preconditioner", "ILU0");
|
||||
prm.put("cpr.finesmoother.w", 1);
|
||||
prm.put("cpr.finesmoother.n", 1);
|
||||
prm.put("cpr.coarsesolver.tol", 0.5);
|
||||
prm.put("cpr.coarsesolver.maxiter", 20);
|
||||
prm.put("cpr.coarsesolver.preconditioner", "amg");
|
||||
prm.put("cpr.coarsesolver.amg.maxlevel", 5);
|
||||
prm.put("cpr.coarsesolver.amg.coarsenTarget", 1000);
|
||||
prm.put("cpr.coarsesolver.amg.smoother", "ILU0");
|
||||
prm.put("cpr.coarsesolver.amg.alpha", 0.2);
|
||||
prm.put("cpr.coarsesolver.amg.beta", 0.0001);
|
||||
prm.put("cpr.coarsesolver.amg.verbosity", 0);
|
||||
prm.put("cpr.coarsesolver.amg.n", 1);
|
||||
prm.put("cpr.coarsesolver.amg.w", 1);
|
||||
prm.put("cpr.coarsesolver.verbosity", 0);
|
||||
prm.put("cpr.coarsesolver.solver", "bicgstab");
|
||||
prm.put("cpr.verbosity", 11);
|
||||
prm.put("cpr.weights_filename" , "weight_cpr.txt");
|
||||
prm.put("cpr.pressure_var_index" , 1);
|
||||
prm.put("verbosity", 10);
|
||||
prm.put("solver", "bicgstab");
|
||||
prm.put("restart", 20);
|
||||
*/
|
||||
|
||||
return prm;
|
||||
}
|
||||
|
||||
} // namespace Opm
|
||||
/*
|
||||
{
|
||||
"tol": "0.5",
|
||||
"maxiter": "20",
|
||||
"preconditioner": "cpr",
|
||||
"w": "1",
|
||||
"n": "1",
|
||||
"amg": "",
|
||||
"cpr": {
|
||||
"finesmoother": {
|
||||
"preconditioner": "ILU0",
|
||||
"w": "1",
|
||||
"n": "1"
|
||||
},
|
||||
"coarsesolver": {
|
||||
"tol": "0.5",
|
||||
"maxiter": "20",
|
||||
"preconditioner": "amg",
|
||||
"amg": {
|
||||
"maxlevel": "5",
|
||||
"coarsenTarget": "1000",
|
||||
"smoother": "ILU0",
|
||||
"alpha": "0.2",
|
||||
"beta": "0.0001",
|
||||
"verbosity": "0",
|
||||
"n": "1",
|
||||
"w": "1"
|
||||
},
|
||||
"verbosity": "0",
|
||||
"solver": "bicgstab"
|
||||
},
|
||||
"verbosity": "11",
|
||||
"weights_filename" : "weight_cpr.txt",
|
||||
"pressure_var_index" : "1"
|
||||
},
|
||||
"verbosity": "10",
|
||||
"solver": "bicgstab",
|
||||
"restart": "20"
|
||||
}
|
||||
*/
|
34
opm/simulators/linalg/setupPropertyTree.hpp
Normal file
34
opm/simulators/linalg/setupPropertyTree.hpp
Normal file
|
@ -0,0 +1,34 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#ifndef OPM_SETUPPROPERTYTREE_HEADER_INCLUDED
|
||||
#define OPM_SETUPPROPERTYTREE_HEADER_INCLUDED
|
||||
|
||||
#include <opm/simulators/linalg/FlowLinearSolverParameters.hpp>
|
||||
|
||||
#include <boost/property_tree/ptree.hpp>
|
||||
|
||||
namespace Opm
|
||||
{
|
||||
|
||||
boost::property_tree::ptree setupPropertyTree(const FlowLinearSolverParameters& p);
|
||||
|
||||
} // namespace Opm
|
||||
|
||||
#endif // OPM_SETUPPROPERTYTREE_HEADER_INCLUDED
|
66
tests/matr33.txt
Normal file
66
tests/matr33.txt
Normal file
|
@ -0,0 +1,66 @@
|
|||
%%MatrixMarket matrix coordinate real general
|
||||
% ISTL_STRUCT blocked 3 3
|
||||
9 9 63
|
||||
1 1 1.63148e-07
|
||||
1 2 0.126774
|
||||
1 3 -6.09774e-05
|
||||
2 1 4.64465e-10
|
||||
2 2 -0.0987407
|
||||
2 3 -5.86038e-05
|
||||
3 1 5.66966e-08
|
||||
3 2 -12.0531
|
||||
3 3 0.0462478
|
||||
1 4 -8.84841e-11
|
||||
1 5 -5.64705e-05
|
||||
1 6 0
|
||||
2 4 -3.93176e-10
|
||||
2 5 0
|
||||
2 6 0
|
||||
3 4 -4.79944e-08
|
||||
3 5 0
|
||||
3 6 0
|
||||
4 1 -8.89921e-11
|
||||
4 2 -0.00786145
|
||||
4 3 0
|
||||
5 1 -3.53139e-10
|
||||
5 2 0.0283977
|
||||
5 3 -3.79289e-05
|
||||
6 1 -4.31072e-08
|
||||
6 2 3.46646
|
||||
6 3 -0.00944335
|
||||
4 4 1.20862e-10
|
||||
4 5 0.0829656
|
||||
4 6 0
|
||||
5 4 7.40377e-10
|
||||
5 5 -0.0929483
|
||||
5 6 -0.0967963
|
||||
6 4 4.64141e-07
|
||||
6 5 -9.10276
|
||||
6 6 16.3772
|
||||
4 7 -2.168e-11
|
||||
4 8 -1.38362e-05
|
||||
4 9 0
|
||||
5 7 -7.8331e-10
|
||||
5 8 0
|
||||
5 9 0
|
||||
6 7 -1.20687e-07
|
||||
6 8 0
|
||||
6 9 0
|
||||
7 4 -2.17548e-11
|
||||
7 5 -0.00183118
|
||||
7 6 0
|
||||
8 4 -8.00212e-10
|
||||
8 5 0.0276779
|
||||
8 6 0.0320899
|
||||
9 4 -1.56667e-07
|
||||
9 5 2.7106
|
||||
9 6 -7.32919
|
||||
7 7 4.43266e-09
|
||||
7 8 0.0744616
|
||||
7 9 0
|
||||
8 7 1.59375e-07
|
||||
8 8 -0.0899451
|
||||
8 9 -0.0940009
|
||||
9 7 2.86852e-05
|
||||
9 8 -5.63337
|
||||
9 9 13.3423
|
38
tests/options_flexiblesolver.json
Normal file
38
tests/options_flexiblesolver.json
Normal file
|
@ -0,0 +1,38 @@
|
|||
{
|
||||
"tol": "0.5",
|
||||
"maxiter": "20",
|
||||
"preconditioner": "cpr",
|
||||
"w": "1",
|
||||
"n": "1",
|
||||
"amg": "",
|
||||
"cpr": {
|
||||
"finesmoother": {
|
||||
"preconditioner": "ILU0",
|
||||
"w": "1",
|
||||
"n": "1"
|
||||
},
|
||||
"coarsesolver": {
|
||||
"tol": "0.5",
|
||||
"maxiter": "20",
|
||||
"preconditioner": "amg",
|
||||
"amg": {
|
||||
"maxlevel": "5",
|
||||
"coarsenTarget": "1000",
|
||||
"smoother": "ILU0",
|
||||
"alpha": "0.2",
|
||||
"beta": "0.0001",
|
||||
"verbosity": "0",
|
||||
"n": "1",
|
||||
"w": "1"
|
||||
},
|
||||
"verbosity": "0",
|
||||
"solver": "bicgstab"
|
||||
},
|
||||
"verbosity": "11",
|
||||
"weights_filename" : "weight_cpr.txt",
|
||||
"pressure_var_index" : "1"
|
||||
},
|
||||
"verbosity": "10",
|
||||
"solver": "bicgstab",
|
||||
"restart": "20"
|
||||
}
|
12
tests/rhs3.txt
Normal file
12
tests/rhs3.txt
Normal file
|
@ -0,0 +1,12 @@
|
|||
%%MatrixMarket matrix array real general
|
||||
% ISTL_STRUCT blocked 3 1
|
||||
9 1
|
||||
-4.48332e-07
|
||||
3.53746e-07
|
||||
4.31812e-05
|
||||
1.48051e-07
|
||||
-5.76325e-07
|
||||
-0.000243496
|
||||
-3.81652e-08
|
||||
1.21761e-06
|
||||
-9.97615e-05
|
108
tests/test_flexiblesolver.cpp
Normal file
108
tests/test_flexiblesolver.cpp
Normal file
|
@ -0,0 +1,108 @@
|
|||
/*
|
||||
Copyright 2019 SINTEF Digital, Mathematics and Cybernetics.
|
||||
|
||||
This file is part of the Open Porous Media project (OPM).
|
||||
|
||||
OPM is free software: you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation, either version 3 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
OPM is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License
|
||||
along with OPM. If not, see <http://www.gnu.org/licenses/>.
|
||||
*/
|
||||
|
||||
#include <config.h>
|
||||
|
||||
#define BOOST_TEST_MODULE OPM_test_FlexibleSolver
|
||||
#include <boost/test/unit_test.hpp>
|
||||
|
||||
#include <boost/property_tree/json_parser.hpp>
|
||||
#include <boost/property_tree/ptree.hpp>
|
||||
#include <fstream>
|
||||
#include <iostream>
|
||||
#include <opm/simulators/linalg/FlexibleSolver.hpp>
|
||||
|
||||
|
||||
template <int bz>
|
||||
Dune::BlockVector<Dune::FieldVector<double, bz>>
|
||||
testSolver(const boost::property_tree::ptree& prm, const std::string& matrix_filename, const std::string& rhs_filename)
|
||||
{
|
||||
using Matrix = Dune::BCRSMatrix<Dune::FieldMatrix<double, bz, bz>>;
|
||||
using Vector = Dune::BlockVector<Dune::FieldVector<double, bz>>;
|
||||
Matrix matrix;
|
||||
{
|
||||
std::ifstream mfile(matrix_filename);
|
||||
if (!mfile) {
|
||||
throw std::runtime_error("Could not read matrix file");
|
||||
}
|
||||
readMatrixMarket(matrix, mfile);
|
||||
}
|
||||
Vector rhs;
|
||||
{
|
||||
std::ifstream rhsfile(rhs_filename);
|
||||
if (!rhsfile) {
|
||||
throw std::runtime_error("Could not read rhs file");
|
||||
}
|
||||
readMatrixMarket(rhs, rhsfile);
|
||||
}
|
||||
Dune::FlexibleSolver<Matrix, Vector> solver(prm, matrix);
|
||||
Vector x(rhs.size());
|
||||
Dune::InverseOperatorResult res;
|
||||
solver.apply(x, rhs, res);
|
||||
return x;
|
||||
}
|
||||
|
||||
BOOST_AUTO_TEST_CASE(TestFlexibleSolver)
|
||||
{
|
||||
namespace pt = boost::property_tree;
|
||||
pt::ptree prm;
|
||||
|
||||
// Read parameters.
|
||||
{
|
||||
std::ifstream file("options_flexiblesolver.json");
|
||||
pt::read_json(file, prm);
|
||||
// pt::write_json(std::cout, prm);
|
||||
}
|
||||
|
||||
// Test with 1x1 block solvers.
|
||||
{
|
||||
const int bz = 1;
|
||||
auto sol = testSolver<bz>(prm, "matr33.txt", "rhs3.txt");
|
||||
Dune::BlockVector<Dune::FieldVector<double, bz>> expected {-1.62493,
|
||||
-1.76435e-06,
|
||||
1.86991e-10,
|
||||
-458.542,
|
||||
2.28308e-06,
|
||||
-2.45341e-07,
|
||||
-1.48005,
|
||||
-5.02264e-07,
|
||||
-1.049e-05};
|
||||
BOOST_REQUIRE_EQUAL(sol.size(), expected.size());
|
||||
for (size_t i = 0; i < sol.size(); ++i) {
|
||||
for (int row = 0; row < bz; ++row) {
|
||||
BOOST_CHECK_CLOSE(sol[i][row], expected[i][row], 1e-3);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// Test with 3x3 block solvers.
|
||||
{
|
||||
const int bz = 3;
|
||||
auto sol = testSolver<bz>(prm, "matr33.txt", "rhs3.txt");
|
||||
Dune::BlockVector<Dune::FieldVector<double, bz>> expected {{-1.62493, -1.76435e-06, 1.86991e-10},
|
||||
{-458.542, 2.28308e-06, -2.45341e-07},
|
||||
{-1.48005, -5.02264e-07, -1.049e-05}};
|
||||
BOOST_REQUIRE_EQUAL(sol.size(), expected.size());
|
||||
for (size_t i = 0; i < sol.size(); ++i) {
|
||||
for (int row = 0; row < bz; ++row) {
|
||||
BOOST_CHECK_CLOSE(sol[i][row], expected[i][row], 1e-3);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
Loading…
Reference in New Issue
Block a user