Joshua Bowden
5e66b07255
fix for crash when cleaning up damaris mesh offset variable due to shared memory buffer being size off by one
2024-01-18 16:36:47 +01:00
Arne Morten Kvarving
ec9c704def
cosmetics and header cleanups in damaris classes
2024-01-10 14:16:02 +01:00
Arne Morten Kvarving
ed28d7c9ef
changed: move damaris command line properties to separate file
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to avoid pulling in the whole writer in DamarisKeywords.hpp
2024-01-10 14:16:02 +01:00
Tor Harald Sandve
87361b8f8d
Throw in output if OwnerCellsFirst = False
2023-12-20 15:36:36 +01:00
Tor Harald Sandve
6eeb5b4187
Only output interior cells
2023-12-20 13:00:46 +01:00
Josh Bowden
55dc80725f
Improved in-line help comments; output MPI cell values to HDF5 only when saving mesh to HDF5; removed timing data
2023-12-14 10:27:05 +01:00
Josh Bowden
e16cd9a3b3
finalise the PR 4889 modifications - added command line option to specifiy the shared memory file name in the <buffer> XML element --damaris-shared-memory-name which will be a randomised string opm-damaris-<random-string> for better multi-simulation behaviour when running more than one simulation on a single node.
2023-12-13 18:14:45 +01:00
Josh Bowden
757a96941a
final review changes from PR 4889 and added extra command line argument to output mesh data --damaris-save-mesh-to-hdf
2023-12-13 18:14:37 +01:00
Josh Bowden
9309f5a1bd
overhaul of GridDataOutput class to accept a vector type so that raw pointers are not overrun, this has lead to finding a good way to get the size of the data area that is alloacted by the DamarisVar wrapper class for damaris_alloc()
2023-12-13 18:14:06 +01:00
Josh Bowden
54d6db6f35
Update 1 for code after code review of PR 4889
2023-12-13 18:13:55 +01:00
Josh Bowden
89fabf132e
adding command line option to specify the dask file being used --damaris-dask-file= that will add the file name to the Daamris XML configuration file
2023-12-08 10:59:51 +01:00
josh bowden
7f7f3b06b2
Chane to fix issue with command line argument template
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integrating code modification suggested by Arne Morten Kvarving (https://github.com/jcbowden/opm-simulators/pull/1 )
2023-09-28 12:58:18 +02:00
josh bowden
8095eb0c48
Geometric mesh data added for in-situ visualisation
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added access to DUNE mesh geometry and passing through data to Damaris;
Updated command line so users can specifiy Python or Paraview script names and other paramaters that control Damaris
- Simulation name
- Number of dedicated cores or dedicated nodes
- Shared memory region size
- switch to turn off HDF5 output.
- Damaris logging level
2023-09-22 23:23:29 +02:00
josh bowden
1e2d9360d7
Move Damaris functionality to it's own class.
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Step one for moving Damaris calls out of EclWriter class and into its own DamarisWriter class;
EclProblem now calls both writeOutput methods and passes in the data::Solution object;
Add fix for first writeOutput() call not having PRESSURE data available;
data::Solution is now passed by rvalue ref into eclWriter::writeOutput();
guard added to prevent inclusion of damariswriter.hh
2023-09-19 21:20:08 +02:00
