Commit Graph

16 Commits

Author SHA1 Message Date
Arne Morten Kvarving
ec9c704def cosmetics and header cleanups in damaris classes 2024-01-10 14:16:02 +01:00
Josh Bowden
757a96941a final review changes from PR 4889 and added extra command line argument to output mesh data --damaris-save-mesh-to-hdf 2023-12-13 18:14:37 +01:00
Josh Bowden
54d6db6f35 Update 1 for code after code review of PR 4889 2023-12-13 18:13:55 +01:00
josh bowden
4a965fe297 some changes to test for paraview and python scripts 2023-09-28 11:12:26 +02:00
josh bowden
c7c4bffa7c Refactored the Damaris command line functionality so that commandline arguments are accessed where they are needed in the DamarisKeywords() method 2023-09-24 22:23:31 +02:00
josh bowden
8095eb0c48 Geometric mesh data added for in-situ visualisation
added access to DUNE mesh geometry and passing through data to Damaris;
Updated command line so users can specifiy Python or Paraview script names and other paramaters that control Damaris
- Simulation name
- Number of dedicated cores or dedicated nodes
- Shared memory region size
- switch to turn off HDF5 output.
- Damaris logging level
2023-09-22 23:23:29 +02:00
josh bowden
1e2d9360d7 Move Damaris functionality to it's own class.
Step one for moving Damaris calls out of EclWriter class and into its own DamarisWriter class;
EclProblem now calls both writeOutput methods and passes in the data::Solution object;

Add fix for first writeOutput() call not having PRESSURE data available;

data::Solution is now passed by rvalue ref into eclWriter::writeOutput();

guard added to prevent inclusion of damariswriter.hh
2023-09-19 21:20:08 +02:00
Atgeirr Flø Rasmussen
130f552dac Must set location for every variable. 2022-12-07 13:37:38 +01:00
Arne Morten Kvarving
ecc36f6ce8 fix cmake handling
- use imported target for linking
- use separate damaris cmake script
- handle HAVE_DAMARIS config variable in the usual way

fixing issues when user does not provide an outputDir via a command_line

avoid adding damaris's command lines when we dont have damaris
2022-10-13 12:23:06 +02:00
Atgeirr Flø Rasmussen
d27ed995bf Use OpmLog. 2022-10-13 12:23:06 +02:00
Atgeirr Flø Rasmussen
c1b3c5e973 Rename option to EnableDamarisOutputCollective. 2022-10-13 12:23:06 +02:00
Atgeirr Flø Rasmussen
430d8995eb Reformatting with clang-format. 2022-10-13 12:23:06 +02:00
Atgeirr Flø Rasmussen
76bacff3cf Move XML template to separate file, fix formatting, and use path. 2022-10-13 12:23:06 +02:00
Atgeirr Flø Rasmussen
fd1d1d15a4 Bugfix: remove quotes around _File_Mode. 2022-10-13 12:23:06 +02:00
Atgeirr Flø Rasmussen
408fadca8e Add #define to fix compile on clang.
Necessary due to primitive check for std::unique_ptr in the XSD library.
2022-10-13 12:23:06 +02:00
Joshua Bowden
fa7af3540c Changes needed to add Damaris functionality. The current state is that we output the pressure field and we use both HDF5 and parallel HDF5.
Damaris initialization is added after InitMpi but before starting the simulation. Damaris will invoke a separate core for writing in
parallel and leave the rest of cores for the simulator. The main changes are in main where start_damaris and then in eclwriterm where
we use damaris to output the PRESSURE. To test Damaris one can use --enable-damaris-output=true and to use parallel HDF5 one can use
--enable-async-damaris-output=true (false is the default choice)
2022-10-13 12:23:06 +02:00