/* This file is part of the Open Porous Media project (OPM). OPM is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 2 of the License, or (at your option) any later version. OPM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with OPM. If not, see . Consult the COPYING file in the top-level source directory of this module for the precise wording of the license and the list of copyright holders. */ #ifndef ECL_HDF5_SERIALIZER_HH #define ECL_HDF5_SERIALIZER_HH #include #include #include #include #include #include #include #include namespace Opm { //! \brief Class for (de-)serializing using HDF5. class HDF5Serializer : public Serializer { public: HDF5Serializer(const std::string& fileName, HDF5File::OpenMode mode, Parallel::Communication comm) : Serializer(m_packer_priv) , m_h5file(fileName, mode, comm) {} //! \brief Serialize and write data to restart file. //! \tparam T Type of class to write //! \param data Class to write restart data for template void write(T& data, const std::string& group, const std::string& dset, HDF5File::DataSetMode mode = HDF5File::DataSetMode::PROCESS_SPLIT) { try { this->pack(data); } catch (...) { m_packSize = std::numeric_limits::max(); throw; } m_h5file.write(group, dset, m_buffer, mode); } //! \brief Writes a header to the file. //! \param simulator_name Name of simulator used //! \param module_version Version of simulator used //! \param time_stamp Build time-stamp for simulator used //! \param case_name Name of case file is associated with //! \param params List of parameter values //! \param num_procs Number of processes used void writeHeader(const std::string& simulator_name, const std::string& module_version, const std::string& time_stamp, const std::string& case_name, const std::string& params, int num_procs) { try { this->pack(simulator_name, module_version, time_stamp, case_name, params, num_procs); } catch (...) { m_packSize = std::numeric_limits::max(); throw; } m_h5file.write("/", "simulator_info", m_buffer, HDF5File::DataSetMode::ROOT_ONLY); } //! \brief Read data and deserialize from restart file. //! \tparam T Type of class to read //! \param data Class to read restart data for template void read(T& data, const std::string& group, const std::string& dset, HDF5File::DataSetMode mode = HDF5File::DataSetMode::PROCESS_SPLIT) { m_h5file.read(group, dset, m_buffer, mode); this->unpack(data); } //! \brief Returns the last report step stored in file. int lastReportStep() const { const auto entries = m_h5file.list("/report_step"); int last = -1; for (const auto& entry : entries) { int num = std::atoi(entry.c_str()); last = std::max(last, num); } return last; } //! \brief Returns a list of report steps stored in restart file. std::vector reportSteps() const { const auto entries = m_h5file.list("/report_step"); std::vector result(entries.size()); std::transform(entries.begin(), entries.end(), result.begin(), [](const std::string& input) { return std::atoi(input.c_str()); }); std::sort(result.begin(), result.end()); return result; } private: const Serialization::MemPacker m_packer_priv{}; //!< Packer instance HDF5File m_h5file; //!< HDF5 backend for the serializer }; } #endif