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https://github.com/OPM/opm-simulators.git
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b87154223b
Commit 371b2592f
misordered the closing brace of a namespace and
the conditional declarations dependent upon MPI availability. This
commit restores the expected order and fixes non-MPI builds.
356 lines
12 KiB
C++
356 lines
12 KiB
C++
/*
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Copyright 2014, 2015 Dr. Markus Blatt - HPC-Simulation-Software & Services
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Copyright 2014, 2015 Statoil ASA
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Copyright 2015 NTNU
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This file is part of the Open Porous Media project (OPM).
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OPM is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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OPM is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with OPM. If not, see <http://www.gnu.org/licenses/>.
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*/
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#include <config.h>
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#if HAVE_MPI && HAVE_DUNE_ISTL
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#include <opm/simulators/linalg/ParallelIstlInformation.hpp>
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#include <dune/common/enumset.hh>
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#include <opm/common/ErrorMacros.hpp>
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#include <cstddef>
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#include <exception>
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#include <mpi.h>
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#include <numeric>
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namespace
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{
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template<class T>
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class IndexSetInserter
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{
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public:
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using ParallelIndexSet = T;
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using LocalIndex = typename ParallelIndexSet::LocalIndex;
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using GlobalIndex = typename ParallelIndexSet::GlobalIndex;
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IndexSetInserter(ParallelIndexSet& indexSet, const GlobalIndex& component_size,
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std::size_t local_component_size, std::size_t num_components)
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: indexSet_(&indexSet), component_size_(component_size),
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local_component_size_(local_component_size),
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num_components_(num_components)
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{}
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void operator()(const typename ParallelIndexSet::IndexPair& pair)
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{
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for(std::size_t i = 0; i < num_components_; i++)
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indexSet_->add(i * component_size_ + pair.global(),
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LocalIndex(i * local_component_size_ + pair.local(),
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pair.local().attribute()));
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}
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private:
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ParallelIndexSet* indexSet_;
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/// \brief The global number of unknowns per component/equation.
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GlobalIndex component_size_;
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/// \brief The local number of unknowns per component/equation.
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std::size_t local_component_size_;
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/// \brief The number of components/equations.
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std::size_t num_components_;
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};
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/** \brief gather/scatter callback for communcation */
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template<typename T>
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struct CopyGatherScatter
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{
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using V = typename Dune::CommPolicy<T>::IndexedType;
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static V gather(const T& a, std::size_t i)
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{
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return a[i];
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}
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static void scatter(T& a, V v, std::size_t i)
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{
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a[i] = v;
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}
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};
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template<int I=0, typename... BinaryOperators, typename... ReturnValues>
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typename std::enable_if<I == sizeof...(BinaryOperators), void>::type
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computeGlobalReduction(const std::tuple<ReturnValues...>&,
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std::tuple<BinaryOperators...>&,
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std::tuple<ReturnValues...>&)
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{}
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template<int I=0, typename... BinaryOperators, typename... ReturnValues>
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typename std::enable_if<I !=sizeof...(BinaryOperators), void>::type
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computeGlobalReduction(const std::tuple<ReturnValues...>& receivedValues,
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std::tuple<BinaryOperators...>& operators,
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std::tuple<ReturnValues...>& values)
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{
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auto& val = std::get<I>(values);
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val = std::get<I>(operators).localOperator()(val, std::get<I>(receivedValues));
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computeGlobalReduction<I+1>(receivedValues, operators, values);
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}
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template<int I=0, typename... Containers, typename... BinaryOperators, typename... ReturnValues>
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typename std::enable_if<I==sizeof...(Containers), void>::type
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computeLocalReduction(const std::tuple<Containers...>&,
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std::tuple<BinaryOperators...>&,
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std::tuple<ReturnValues...>&,
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const std::vector<double>&)
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{}
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template<int I=0, typename... Containers, typename... BinaryOperators, typename... ReturnValues>
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typename std::enable_if<I!=sizeof...(Containers), void>::type
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computeLocalReduction(const std::tuple<Containers...>& containers,
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std::tuple<BinaryOperators...>& operators,
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std::tuple<ReturnValues...>& values,
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const std::vector<double>& ownerMask)
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{
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const auto& container = std::get<I>(containers);
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if (container.size())
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{
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auto& reduceOperator = std::get<I>(operators);
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// Eigen:Block does not support STL iterators!!!!
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// Therefore we need to rely on the harder random-access
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// property of the containers. But this should be save, too.
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// Just commenting out code in the hope that Eigen might improve
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// in this regard in the future.
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//auto newVal = container.begin();
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auto mask = ownerMask.begin();
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auto& value = std::get<I>(values);
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value = reduceOperator.getInitialValue();
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for (auto endVal = ownerMask.end(); mask != endVal; /*++newVal,*/ ++mask )
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{
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value = reduceOperator(value, container[mask-ownerMask.begin()], *mask);
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}
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}
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computeLocalReduction<I+1>(containers, operators, values, ownerMask);
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}
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}
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namespace Opm
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{
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namespace
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{
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template<class T>
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struct is_tuple
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: std::integral_constant<bool, false>
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{};
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template<typename... T>
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struct is_tuple<std::tuple<T...> >
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: std::integral_constant<bool, true>
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{};
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}
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ParallelISTLInformation::ParallelISTLInformation()
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: indexSet_(new ParallelIndexSet),
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remoteIndices_(new RemoteIndices(*indexSet_, *indexSet_, MPI_COMM_WORLD)),
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communicator_(MPI_COMM_WORLD)
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{}
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ParallelISTLInformation::ParallelISTLInformation(MPI_Comm communicator)
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: indexSet_(new ParallelIndexSet),
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remoteIndices_(new RemoteIndices(*indexSet_, *indexSet_, communicator)),
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communicator_(communicator)
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{}
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ParallelISTLInformation::
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ParallelISTLInformation(const std::shared_ptr<ParallelIndexSet>& indexSet,
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const std::shared_ptr<RemoteIndices>& remoteIndices,
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MPI_Comm communicator)
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: indexSet_(indexSet), remoteIndices_(remoteIndices), communicator_(communicator)
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{}
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ParallelISTLInformation::ParallelISTLInformation(const ParallelISTLInformation& other)
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: indexSet_(other.indexSet_), remoteIndices_(other.remoteIndices_),
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communicator_(other.communicator_)
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{}
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void ParallelISTLInformation::copyValuesTo(ParallelIndexSet& indexSet,
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RemoteIndices& remoteIndices,
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std::size_t local_component_size,
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std::size_t num_components) const
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{
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ParallelIndexSet::GlobalIndex global_component_size = local_component_size;
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if ( num_components > 1 )
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{
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ParallelIndexSet::GlobalIndex max_gi = 0;
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// component the max global index
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for( auto i = indexSet_->begin(), end = indexSet_->end(); i != end; ++i )
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{
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max_gi = std::max(max_gi, i->global());
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}
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global_component_size = max_gi+1;
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global_component_size = communicator_.max(global_component_size);
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}
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indexSet.beginResize();
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IndexSetInserter<ParallelIndexSet> inserter(indexSet, global_component_size,
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local_component_size, num_components);
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std::for_each(indexSet_->begin(), indexSet_->end(), inserter);
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indexSet.endResize();
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remoteIndices.rebuild<false>();
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}
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template<class T>
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void ParallelISTLInformation::copyOwnerToAll(const T& source, T& dest) const
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{
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using AS = Dune::OwnerOverlapCopyAttributeSet;
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using CopySet = Dune::EnumItem<AS, AS::copy>;
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using OwnerSet = Dune::EnumItem<AS, AS::owner>;
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using OverlapSet = Dune::EnumItem<AS, AS::overlap>;
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using OwnerOverlapSet = Dune::Combine<OwnerSet, OverlapSet, AS::AttributeSet>;
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using AllSet = Dune::Combine<OwnerOverlapSet, CopySet, AS::AttributeSet>;
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OwnerSet sourceFlags;
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AllSet destFlags;
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Dune::Interface interface(communicator_);
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if( !remoteIndices_->isSynced() )
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{
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remoteIndices_->rebuild<false>();
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}
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interface.build(*remoteIndices_,sourceFlags,destFlags);
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Dune::BufferedCommunicator communicator;
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communicator.template build<T>(interface);
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communicator.template forward<CopyGatherScatter<T>>(source,dest);
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communicator.free();
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}
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template<class T>
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const std::vector<double>&
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ParallelISTLInformation::updateOwnerMask(const T& container) const
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{
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if (!indexSet_)
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{
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OPM_THROW(std::runtime_error, "Trying to update owner mask without parallel information!");
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}
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if (static_cast<std::size_t>(container.size()) != ownerMask_.size())
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{
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ownerMask_.resize(container.size(), 1.);
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for (const auto& i : *indexSet_)
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{
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if (i.local().attribute() != Dune::OwnerOverlapCopyAttributeSet::owner)
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{
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ownerMask_[i.local().local()] = 0.;
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}
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}
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}
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return ownerMask_;
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}
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template<typename Container, typename BinaryOperator, typename T>
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void ParallelISTLInformation::computeReduction(const Container& container,
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BinaryOperator binaryOperator,
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T& value) const
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{
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if constexpr (is_tuple<Container>())
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computeTupleReduction(container, binaryOperator, value);
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else
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{
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std::tuple<const Container&> containers = std::tuple<const Container&>(container);
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auto values = std::make_tuple(value);
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auto operators = std::make_tuple(binaryOperator);
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computeTupleReduction(containers, operators, values);
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value = std::get<0>(values);
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}
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}
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template<typename... Containers, typename... BinaryOperators, typename... ReturnValues>
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void ParallelISTLInformation::computeTupleReduction(const std::tuple<Containers...>& containers,
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std::tuple<BinaryOperators...>& operators,
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std::tuple<ReturnValues...>& values) const
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{
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static_assert(std::tuple_size<std::tuple<Containers...> >::value ==
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std::tuple_size<std::tuple<BinaryOperators...> >::value,
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"We need the same number of containers and binary operators");
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static_assert(std::tuple_size<std::tuple<Containers...> >::value ==
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std::tuple_size<std::tuple<ReturnValues...> >::value,
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"We need the same number of containers and return values");
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if (std::tuple_size<std::tuple<Containers...> >::value == 0)
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{
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return;
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}
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// Copy the initial values.
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std::tuple<ReturnValues...> init = values;
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updateOwnerMask(std::get<0>(containers));
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computeLocalReduction(containers, operators, values, ownerMask_);
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std::vector<std::tuple<ReturnValues...> > receivedValues(communicator_.size());
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communicator_.allgather(&values, 1, &(receivedValues[0]));
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values = init;
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for (auto& rval : receivedValues)
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{
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computeGlobalReduction(rval, operators, values);
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}
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}
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template<class T1>
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auto
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accumulateMaskedValues(const T1& container, const std::vector<double>* maskContainer)
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-> decltype(container[0]*(*maskContainer)[0])
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{
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decltype(container[0]*(*maskContainer)[0]) initial = 0;
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if (maskContainer)
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{
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return std::inner_product(container.begin(), container.end(),
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maskContainer->begin(), initial);
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}
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else
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{
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return std::accumulate(container.begin(), container.end(), initial);
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}
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}
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template<class T> using C1 = std::vector<T>;
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template<class T> using Ops1 = Reduction::MaskIDOperator<std::plus<T>>;
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template<class T>
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using C2 = std::tuple<std::vector<T>,
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std::vector<T>,
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std::vector<T>,
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std::vector<T>,
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std::vector<T>>;
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template<class T>
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using Ops2 = std::tuple<decltype(Reduction::makeGlobalSumFunctor<T>()),
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decltype(Reduction::makeGlobalMaxFunctor<T>()),
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decltype(Reduction::makeGlobalMinFunctor<T>()),
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decltype(Reduction::makeInnerProductFunctor<T>()),
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decltype(Reduction::makeLInfinityNormFunctor<T>())>;
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template<class T>
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using Vals2 = std::tuple<T,T,T,T,T>;
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#define INSTANCE1(T) \
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template void ParallelISTLInformation::computeReduction<C1<T>,Ops1<T>,T>(const C1<T>&,Ops1<T>,T&) const;
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#define INSTANCE2(T) \
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template void ParallelISTLInformation::computeReduction<C2<T>,Ops2<T>,Vals2<T>>(const C2<T>&,Ops2<T>,Vals2<T>&) const;
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#define INSTANCE(T) \
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INSTANCE1(T) \
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INSTANCE2(T)
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INSTANCE(int)
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INSTANCE(float)
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INSTANCE(std::size_t)
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} // namespace Opm
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#endif // HAVE_MPI && HAVE_DUNE_ISTL
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