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opm-simulators/opm/simulators/flow/Transmissibility_impl.hpp
Markus Blatt e743f2aa1e Skip bogus warning about missing cells for PINCH NNCs 
Cells are only missing if both are in the ghost overlap layer.
In this case we do not have a connection here to keep the matrix
more sparse.
2024-10-01 11:15:11 +02:00

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// -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
// vi: set et ts=4 sw=4 sts=4:
/*
This file is part of the Open Porous Media project (OPM).
OPM is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 2 of the License, or
(at your option) any later version.
OPM is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with OPM. If not, see <http://www.gnu.org/licenses/>.
Consult the COPYING file in the top-level source directory of this
module for the precise wording of the license and the list of
copyright holders.
*/
#ifndef OPM_TRANSMISSIBILITY_IMPL_HPP
#define OPM_TRANSMISSIBILITY_IMPL_HPP
#include <dune/common/version.hh>
#include <dune/grid/common/mcmgmapper.hh>
#include <opm/grid/CpGrid.hpp>
#include <opm/common/OpmLog/KeywordLocation.hpp>
#include <opm/input/eclipse/EclipseState/EclipseState.hpp>
#include <opm/input/eclipse/EclipseState/Grid/FaceDir.hpp>
#include <opm/input/eclipse/EclipseState/Grid/FieldPropsManager.hpp>
#include <opm/input/eclipse/EclipseState/Grid/TransMult.hpp>
#include <opm/input/eclipse/Units/Units.hpp>
#include <opm/simulators/flow/Transmissibility.hpp>
#include <fmt/format.h>
#include <algorithm>
#include <array>
#include <cassert>
#include <cmath>
#include <cstddef>
#include <cstdint>
#include <functional>
#include <initializer_list>
#include <sstream>
#include <stdexcept>
#include <type_traits>
#include <utility>
#include <vector>
namespace Opm {
namespace details {
constexpr unsigned elemIdxShift = 32; // bits
std::uint64_t isId(std::uint32_t elemIdx1, std::uint32_t elemIdx2)
{
std::uint32_t elemAIdx = std::min(elemIdx1, elemIdx2);
std::uint64_t elemBIdx = std::max(elemIdx1, elemIdx2);
return (elemBIdx<<elemIdxShift) + elemAIdx;
}
std::pair<std::uint32_t, std::uint32_t> isIdReverse(const std::uint64_t& id)
{
// Assigning an unsigned integer to a narrower type discards the most significant bits.
// See "The C programming language", section A.6.2.
// NOTE that the ordering of element A and B may have changed
std::uint32_t elemAIdx = id;
std::uint32_t elemBIdx = (id - elemAIdx) >> elemIdxShift;
return std::make_pair(elemAIdx, elemBIdx);
}
std::uint64_t directionalIsId(std::uint32_t elemIdx1, std::uint32_t elemIdx2)
{
return (std::uint64_t(elemIdx1)<<elemIdxShift) + elemIdx2;
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
Transmissibility(const EclipseState& eclState,
const GridView& gridView,
const CartesianIndexMapper& cartMapper,
const Grid& grid,
std::function<std::array<double,dimWorld>(int)> centroids,
bool enableEnergy,
bool enableDiffusivity,
bool enableDispersivity)
: eclState_(eclState)
, gridView_(gridView)
, cartMapper_(cartMapper)
, grid_(grid)
, centroids_(centroids)
, enableEnergy_(enableEnergy)
, enableDiffusivity_(enableDiffusivity)
, enableDispersivity_(enableDispersivity)
, lookUpData_(gridView)
, lookUpCartesianData_(gridView, cartMapper)
{
const UnitSystem& unitSystem = eclState_.getDeckUnitSystem();
transmissibilityThreshold_ = unitSystem.parse("Transmissibility").getSIScaling() * 1e-6;
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Scalar Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
transmissibility(unsigned elemIdx1, unsigned elemIdx2) const
{
return trans_.at(details::isId(elemIdx1, elemIdx2));
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Scalar Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
transmissibilityBoundary(unsigned elemIdx, unsigned boundaryFaceIdx) const
{
return transBoundary_.at(std::make_pair(elemIdx, boundaryFaceIdx));
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Scalar Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
thermalHalfTrans(unsigned insideElemIdx, unsigned outsideElemIdx) const
{
return thermalHalfTrans_.at(details::directionalIsId(insideElemIdx, outsideElemIdx));
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Scalar Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
thermalHalfTransBoundary(unsigned insideElemIdx, unsigned boundaryFaceIdx) const
{
return thermalHalfTransBoundary_.at(std::make_pair(insideElemIdx, boundaryFaceIdx));
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Scalar Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
diffusivity(unsigned elemIdx1, unsigned elemIdx2) const
{
if (diffusivity_.empty())
return 0.0;
return diffusivity_.at(details::isId(elemIdx1, elemIdx2));
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
Scalar Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
dispersivity(unsigned elemIdx1, unsigned elemIdx2) const
{
if (dispersivity_.empty())
return 0.0;
return dispersivity_.at(details::isId(elemIdx1, elemIdx2));
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
update(bool global, const TransUpdateQuantities update_quantities,
const std::function<unsigned int(unsigned int)>& map, const bool applyNncMultregT)
{
// whether only update the permeability related transmissibility
const bool onlyTrans = (update_quantities == TransUpdateQuantities::Trans);
const auto& cartDims = cartMapper_.cartesianDimensions();
const auto& transMult = eclState_.getTransMult();
const auto& comm = gridView_.comm();
ElementMapper elemMapper(gridView_, Dune::mcmgElementLayout());
unsigned numElements = elemMapper.size();
// get the ntg values, the ntg values are modified for the cells merged with minpv
const std::vector<double>& ntg = this->lookUpData_.assignFieldPropsDoubleOnLeaf(eclState_.fieldProps(), "NTG");
const bool updateDiffusivity = eclState_.getSimulationConfig().isDiffusive();
const bool updateDispersivity = eclState_.getSimulationConfig().rock_config().dispersion();
const bool disableNNC = eclState_.getSimulationConfig().useNONNC();
if (map)
extractPermeability_(map);
else
extractPermeability_();
// reserving some space in the hashmap upfront saves quite a bit of time because
// resizes are costly for hashmaps and there would be quite a few of them if we
// would not have a rough idea of how large the final map will be (the rough idea
// is a conforming Cartesian grid).
trans_.clear();
trans_.reserve(numElements*3*1.05);
transBoundary_.clear();
// if energy is enabled, let's do the same for the "thermal half transmissibilities"
if (enableEnergy_ && !onlyTrans) {
thermalHalfTrans_.clear();
thermalHalfTrans_.reserve(numElements*6*1.05);
thermalHalfTransBoundary_.clear();
}
// if diffusion is enabled, let's do the same for the "diffusivity"
if (updateDiffusivity && !onlyTrans) {
diffusivity_.clear();
diffusivity_.reserve(numElements*3*1.05);
extractPorosity_();
}
// if dispersion is enabled, let's do the same for the "dispersivity"
if (updateDispersivity && !onlyTrans) {
dispersivity_.clear();
dispersivity_.reserve(numElements*3*1.05);
extractDispersion_();
}
// The MULTZ needs special case if the option is ALL
// Then the smallest multiplier is applied.
// Default is to apply the top and bottom multiplier
bool useSmallestMultiplier;
bool pinchOption4ALL;
bool pinchActive;
if (comm.rank() == 0) {
const auto& eclGrid = eclState_.getInputGrid();
pinchActive = eclGrid.isPinchActive();
auto pinchTransCalcMode = eclGrid.getPinchOption();
useSmallestMultiplier = eclGrid.getMultzOption() == PinchMode::ALL;
pinchOption4ALL = (pinchTransCalcMode == PinchMode::ALL);
if (pinchOption4ALL)
{
useSmallestMultiplier = false;
}
}
if (global && comm.size() > 1) {
comm.broadcast(&useSmallestMultiplier, 1, 0);
comm.broadcast(&pinchOption4ALL, 1, 0);
comm.broadcast(&pinchActive, 1, 0);
}
// compute the transmissibilities for all intersections
for (const auto& elem : elements(gridView_)) {
unsigned elemIdx = elemMapper.index(elem);
auto isIt = gridView_.ibegin(elem);
const auto& isEndIt = gridView_.iend(elem);
unsigned boundaryIsIdx = 0;
for (; isIt != isEndIt; ++ isIt) {
// store intersection, this might be costly
const auto& intersection = *isIt;
// deal with grid boundaries
if (intersection.boundary()) {
// compute the transmissibilty for the boundary intersection
const auto& geometry = intersection.geometry();
const auto& faceCenterInside = geometry.center();
auto faceAreaNormal = intersection.centerUnitOuterNormal();
faceAreaNormal *= geometry.volume();
Scalar transBoundaryIs;
computeHalfTrans_(transBoundaryIs,
faceAreaNormal,
intersection.indexInInside(),
distanceVector_(faceCenterInside,
elemIdx),
permeability_[elemIdx]);
// normally there would be two half-transmissibilities that would be
// averaged. on the grid boundary there only is the half
// transmissibility of the interior element.
unsigned insideCartElemIdx = cartMapper_.cartesianIndex(elemIdx);
applyMultipliers_(transBoundaryIs, intersection.indexInInside(), insideCartElemIdx, transMult);
transBoundary_[std::make_pair(elemIdx, boundaryIsIdx)] = transBoundaryIs;
// for boundary intersections we also need to compute the thermal
// half transmissibilities
if (enableEnergy_ && !onlyTrans) {
Scalar transBoundaryEnergyIs;
computeHalfDiffusivity_(transBoundaryEnergyIs,
faceAreaNormal,
distanceVector_(faceCenterInside,
elemIdx),
1.0);
thermalHalfTransBoundary_[std::make_pair(elemIdx, boundaryIsIdx)] =
transBoundaryEnergyIs;
}
++ boundaryIsIdx;
continue;
}
if (!intersection.neighbor()) {
// elements can be on process boundaries, i.e. they are not on the
// domain boundary yet they don't have neighbors.
++ boundaryIsIdx;
continue;
}
const auto& outsideElem = intersection.outside();
unsigned outsideElemIdx = elemMapper.index(outsideElem);
// Get the Cartesian indices of the origen cells (parent or equivalent cell on level zero), for CpGrid with LGRs.
// For genral grids and no LGRs, get the usual Cartesian Index.
unsigned insideCartElemIdx = this-> lookUpCartesianData_.template getFieldPropCartesianIdx<Grid>(elemIdx);
unsigned outsideCartElemIdx = this-> lookUpCartesianData_.template getFieldPropCartesianIdx<Grid>(outsideElemIdx);
// we only need to calculate a face's transmissibility
// once...
// In a parallel run insideCartElemIdx>outsideCartElemIdx does not imply elemIdx>outsideElemIdx for
// ghost cells and we need to use the cartesian index as this will be used when applying Z multipliers
// To cover the case where both cells are part of an LGR and as a consequence might have
// the same cartesian index, we tie their Cartesian indices and the ones on the leaf grid view.
if (std::tie(insideCartElemIdx, elemIdx) > std::tie(outsideCartElemIdx, outsideElemIdx))
continue;
// local indices of the faces of the inside and
// outside elements which contain the intersection
int insideFaceIdx = intersection.indexInInside();
int outsideFaceIdx = intersection.indexInOutside();
if (insideFaceIdx == -1) {
// NNC. Set zero transmissibility, as it will be
// *added to* by applyNncToGridTrans_() later.
assert(outsideFaceIdx == -1);
trans_[details::isId(elemIdx, outsideElemIdx)] = 0.0;
if (enableEnergy_ && !onlyTrans){
thermalHalfTrans_[details::directionalIsId(elemIdx, outsideElemIdx)] = 0.0;
thermalHalfTrans_[details::directionalIsId(outsideElemIdx, elemIdx)] = 0.0;
}
if (updateDiffusivity && !onlyTrans) {
diffusivity_[details::isId(elemIdx, outsideElemIdx)] = 0.0;
}
if (updateDispersivity && !onlyTrans) {
dispersivity_[details::isId(elemIdx, outsideElemIdx)] = 0.0;
}
continue;
}
DimVector faceCenterInside;
DimVector faceCenterOutside;
DimVector faceAreaNormal;
typename std::is_same<Grid, Dune::CpGrid>::type isCpGrid;
computeFaceProperties(intersection,
elemIdx,
insideFaceIdx,
outsideElemIdx,
outsideFaceIdx,
faceCenterInside,
faceCenterOutside,
faceAreaNormal,
isCpGrid);
Scalar halfTrans1;
Scalar halfTrans2;
computeHalfTrans_(halfTrans1,
faceAreaNormal,
insideFaceIdx,
distanceVector_(faceCenterInside,
elemIdx),
permeability_[elemIdx]);
computeHalfTrans_(halfTrans2,
faceAreaNormal,
outsideFaceIdx,
distanceVector_(faceCenterOutside,
outsideElemIdx),
permeability_[outsideElemIdx]);
applyNtg_(halfTrans1, insideFaceIdx, elemIdx, ntg);
applyNtg_(halfTrans2, outsideFaceIdx, outsideElemIdx, ntg);
// convert half transmissibilities to full face
// transmissibilities using the harmonic mean
Scalar trans;
if (std::abs(halfTrans1) < 1e-30 || std::abs(halfTrans2) < 1e-30)
// avoid division by zero
trans = 0.0;
else
trans = 1.0 / (1.0/halfTrans1 + 1.0/halfTrans2);
// apply the full face transmissibility multipliers
// for the inside ...
if(!pinchActive){
if (insideFaceIdx > 3){// top or bottom
auto find_layer = [&cartDims](std::size_t cell){
cell /= cartDims[0];
auto k = cell / cartDims[1];
return k;
};
int kup = find_layer(insideCartElemIdx);
int kdown=find_layer(outsideCartElemIdx);
// When a grid is a CpGrid with LGRs, insideCartElemIdx coincides with outsideCartElemIdx
// for cells on the leaf with the same parent cell on level zero.
assert((kup != kdown) || (insideCartElemIdx == outsideCartElemIdx));
if(std::abs(kup -kdown) > 1){
trans = 0.0;
}
}
}
if (useSmallestMultiplier)
{
// PINCH(4) == TOPBOT is assumed here as we set useSmallestMultipliers
// to false if PINCH(4) == ALL holds
// In contrast to the name this will also apply
applyAllZMultipliers_(trans, insideFaceIdx, outsideFaceIdx, insideCartElemIdx,
outsideCartElemIdx, transMult, cartDims);
}
else
{
applyMultipliers_(trans, insideFaceIdx, insideCartElemIdx, transMult);
// ... and outside elements
applyMultipliers_(trans, outsideFaceIdx, outsideCartElemIdx, transMult);
}
// apply the region multipliers (cf. the MULTREGT keyword)
FaceDir::DirEnum faceDir;
switch (insideFaceIdx) {
case 0:
case 1:
faceDir = FaceDir::XPlus;
break;
case 2:
case 3:
faceDir = FaceDir::YPlus;
break;
case 4:
case 5:
faceDir = FaceDir::ZPlus;
break;
default:
throw std::logic_error("Could not determine a face direction");
}
trans *= transMult.getRegionMultiplier(insideCartElemIdx,
outsideCartElemIdx,
faceDir);
trans_[details::isId(elemIdx, outsideElemIdx)] = trans;
// update the "thermal half transmissibility" for the intersection
if (enableEnergy_ && !onlyTrans) {
Scalar halfDiffusivity1;
Scalar halfDiffusivity2;
computeHalfDiffusivity_(halfDiffusivity1,
faceAreaNormal,
distanceVector_(faceCenterInside,
elemIdx),
1.0);
computeHalfDiffusivity_(halfDiffusivity2,
faceAreaNormal,
distanceVector_(faceCenterOutside,
outsideElemIdx),
1.0);
//TODO Add support for multipliers
thermalHalfTrans_[details::directionalIsId(elemIdx, outsideElemIdx)] = halfDiffusivity1;
thermalHalfTrans_[details::directionalIsId(outsideElemIdx, elemIdx)] = halfDiffusivity2;
}
// update the "diffusive half transmissibility" for the intersection
if (updateDiffusivity && !onlyTrans) {
Scalar halfDiffusivity1;
Scalar halfDiffusivity2;
computeHalfDiffusivity_(halfDiffusivity1,
faceAreaNormal,
distanceVector_(faceCenterInside,
elemIdx),
porosity_[elemIdx]);
computeHalfDiffusivity_(halfDiffusivity2,
faceAreaNormal,
distanceVector_(faceCenterOutside,
outsideElemIdx),
porosity_[outsideElemIdx]);
applyNtg_(halfDiffusivity1, insideFaceIdx, elemIdx, ntg);
applyNtg_(halfDiffusivity2, outsideFaceIdx, outsideElemIdx, ntg);
//TODO Add support for multipliers
Scalar diffusivity;
if (std::abs(halfDiffusivity1) < 1e-30 || std::abs(halfDiffusivity2) < 1e-30)
// avoid division by zero
diffusivity = 0.0;
else
diffusivity = 1.0 / (1.0/halfDiffusivity1 + 1.0/halfDiffusivity2);
diffusivity_[details::isId(elemIdx, outsideElemIdx)] = diffusivity;
}
// update the "dispersivity half transmissibility" for the intersection
if (updateDispersivity && !onlyTrans) {
Scalar halfDispersivity1;
Scalar halfDispersivity2;
computeHalfDiffusivity_(halfDispersivity1,
faceAreaNormal,
distanceVector_(faceCenterInside,
elemIdx),
dispersion_[elemIdx]);
computeHalfDiffusivity_(halfDispersivity2,
faceAreaNormal,
distanceVector_(faceCenterOutside,
outsideElemIdx),
dispersion_[outsideElemIdx]);
applyNtg_(halfDispersivity1, insideFaceIdx, elemIdx, ntg);
applyNtg_(halfDispersivity2, outsideFaceIdx, outsideElemIdx, ntg);
//TODO Add support for multipliers
Scalar dispersivity;
if (std::abs(halfDispersivity1) < 1e-30 || std::abs(halfDispersivity2) < 1e-30)
// avoid division by zero
dispersivity = 0.0;
else
dispersivity = 1.0 / (1.0/halfDispersivity1 + 1.0/halfDispersivity2);
dispersivity_[details::isId(elemIdx, outsideElemIdx)] = dispersivity;
}
}
}
// Potentially overwrite and/or modify transmissibilities based on input from deck
this->updateFromEclState_(global);
// Create mapping from global to local index
std::unordered_map<std::size_t,int> globalToLocal;
// Loop over all elements (global grid) and store Cartesian index
for (const auto& elem : elements(grid_.leafGridView())) {
int elemIdx = elemMapper.index(elem);
int cartElemIdx = cartMapper_.cartesianIndex(elemIdx);
globalToLocal[cartElemIdx] = elemIdx;
}
if (!disableNNC) {
// For EDITNNC and EDITNNCR we warn only once
// If transmissibility is used for load balancing this will be done
// when computing the gobal transmissibilities and all warnings will
// be seen in a parallel. Unfortunately, when we do not use transmissibilities
// we will only see warnings for the partition of process 0 and also false positives.
this->applyEditNncToGridTrans_(globalToLocal);
this->applyPinchNncToGridTrans_(globalToLocal);
this->applyNncToGridTrans_(globalToLocal);
this->applyEditNncrToGridTrans_(globalToLocal);
if (applyNncMultregT) {
this->applyNncMultreg_(globalToLocal);
}
warnEditNNC_ = false;
}
// If disableNNC == true, remove all non-neighbouring transmissibilities.
// If disableNNC == false, remove very small non-neighbouring transmissibilities.
this->removeNonCartesianTransmissibilities_(disableNNC);
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
extractPermeability_()
{
unsigned numElem = gridView_.size(/*codim=*/0);
permeability_.resize(numElem);
// read the intrinsic permeabilities from the eclState. Note that all arrays
// provided by eclState are one-per-cell of "uncompressed" grid, whereas the
// simulation grid might remove a few elements. (e.g. because it is distributed
// over several processes.)
const auto& fp = eclState_.fieldProps();
if (fp.has_double("PERMX")) {
const std::vector<double>& permxData = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp, "PERMX");
std::vector<double> permyData;
if (fp.has_double("PERMY"))
permyData = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PERMY");
else
permyData = permxData;
std::vector<double> permzData;
if (fp.has_double("PERMZ"))
permzData = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PERMZ");
else
permzData = permxData;
for (std::size_t dofIdx = 0; dofIdx < numElem; ++ dofIdx) {
permeability_[dofIdx] = 0.0;
permeability_[dofIdx][0][0] = permxData[dofIdx];
permeability_[dofIdx][1][1] = permyData[dofIdx];
permeability_[dofIdx][2][2] = permzData[dofIdx];
}
// for now we don't care about non-diagonal entries
}
else
throw std::logic_error("Can't read the intrinsic permeability from the ecl state. "
"(The PERM{X,Y,Z} keywords are missing)");
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
extractPermeability_(const std::function<unsigned int(unsigned int)>& map)
{
unsigned numElem = gridView_.size(/*codim=*/0);
permeability_.resize(numElem);
// read the intrinsic permeabilities from the eclState. Note that all arrays
// provided by eclState are one-per-cell of "uncompressed" grid, whereas the
// simulation grid might remove a few elements. (e.g. because it is distributed
// over several processes.)
const auto& fp = eclState_.fieldProps();
if (fp.has_double("PERMX")) {
const std::vector<double>& permxData = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PERMX");
std::vector<double> permyData;
if (fp.has_double("PERMY"))
permyData = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PERMY");
else
permyData = permxData;
std::vector<double> permzData;
if (fp.has_double("PERMZ"))
permzData = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PERMZ");
else
permzData = permxData;
for (std::size_t dofIdx = 0; dofIdx < numElem; ++ dofIdx) {
permeability_[dofIdx] = 0.0;
std::size_t inputDofIdx = map(dofIdx);
permeability_[dofIdx][0][0] = permxData[inputDofIdx];
permeability_[dofIdx][1][1] = permyData[inputDofIdx];
permeability_[dofIdx][2][2] = permzData[inputDofIdx];
}
// for now we don't care about non-diagonal entries
}
else
throw std::logic_error("Can't read the intrinsic permeability from the ecl state. "
"(The PERM{X,Y,Z} keywords are missing)");
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
extractPorosity_()
{
// read the intrinsic porosity from the eclState. Note that all arrays
// provided by eclState are one-per-cell of "uncompressed" grid, whereas the
// simulation grid might remove a few elements. (e.g. because it is distributed
// over several processes.)
const auto& fp = eclState_.fieldProps();
if (fp.has_double("PORO")) {
if constexpr (std::is_same_v<Scalar,double>) {
porosity_ = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PORO");
} else {
const auto por = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"PORO");
porosity_.resize(por.size());
std::copy(por.begin(), por.end(), porosity_.begin());
}
}
else
throw std::logic_error("Can't read the porosityfrom the ecl state. "
"(The PORO keywords are missing)");
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
extractDispersion_()
{
if (!enableDispersivity_) {
throw std::runtime_error("Dispersion disabled at compile time, but the deck "
"contains the DISPERC keyword.");
}
const auto& fp = eclState_.fieldProps();
if constexpr (std::is_same_v<Scalar,double>) {
dispersion_ = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"DISPERC");
} else {
const auto disp = this-> lookUpData_.assignFieldPropsDoubleOnLeaf(fp,"DISPERC");
dispersion_.resize(disp.size());
std::copy(disp.begin(), disp.end(), dispersion_.begin());
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
removeNonCartesianTransmissibilities_(bool removeAll)
{
const auto& cartDims = cartMapper_.cartesianDimensions();
for (auto&& trans: trans_) {
//either remove all NNC transmissibilities or those less than the threshold (by default 1e-6 in the deck's unit system)
if (removeAll or trans.second < transmissibilityThreshold_) {
const auto& id = trans.first;
const auto& elements = details::isIdReverse(id);
int gc1 = std::min(cartMapper_.cartesianIndex(elements.first), cartMapper_.cartesianIndex(elements.second));
int gc2 = std::max(cartMapper_.cartesianIndex(elements.first), cartMapper_.cartesianIndex(elements.second));
// only adjust the NNCs
// When LGRs, all neighbors in the LGR are cartesian neighbours on the level grid representing the LGR.
// When elements on the leaf grid view have the same parent cell, gc1 and gc2 coincide.
if (gc2 - gc1 == 1 || gc2 - gc1 == cartDims[0] || gc2 - gc1 == cartDims[0]*cartDims[1] || gc2 - gc1 == 0)
continue;
trans.second = 0.0;
}
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper, Scalar>::
applyAllZMultipliers_(Scalar& trans,
unsigned insideFaceIdx,
unsigned outsideFaceIdx,
unsigned insideCartElemIdx,
unsigned outsideCartElemIdx,
const TransMult& transMult,
const std::array<int, dimWorld>& cartDims)
{
if(grid_.maxLevel()> 0) {
OPM_THROW(std::invalid_argument, "MULTZ not support with LGRS, yet.");
}
if (insideFaceIdx > 3) { // top or or bottom
assert(insideFaceIdx==5); // as insideCartElemIdx < outsideCartElemIdx holds for the Z column
// For CpGrid with LGRs, insideCartElemIdx == outsideCartElemIdx when cells on the leaf have the same parent cell on level zero.
assert(outsideCartElemIdx >= insideCartElemIdx);
unsigned lastCartElemIdx;
if (outsideCartElemIdx == insideCartElemIdx) {
lastCartElemIdx = outsideCartElemIdx;
}
else {
lastCartElemIdx = outsideCartElemIdx - cartDims[0]*cartDims[1];
}
// Last multiplier using (Z+)*(Z-)
Scalar mult = transMult.getMultiplier(lastCartElemIdx , FaceDir::ZPlus) *
transMult.getMultiplier(outsideCartElemIdx , FaceDir::ZMinus);
// pick the smallest multiplier using (Z+)*(Z-) while looking down
// the pillar until reaching the other end of the connection
for(auto cartElemIdx = insideCartElemIdx; cartElemIdx < lastCartElemIdx;)
{
auto multiplier = transMult.getMultiplier(cartElemIdx, FaceDir::ZPlus);
cartElemIdx += cartDims[0]*cartDims[1];
multiplier *= transMult.getMultiplier(cartElemIdx, FaceDir::ZMinus);
mult = std::min(mult, static_cast<Scalar>(multiplier));
}
trans *= mult;
}
else
{
applyMultipliers_(trans, insideFaceIdx, insideCartElemIdx, transMult);
applyMultipliers_(trans, outsideFaceIdx, outsideCartElemIdx, transMult);
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
updateFromEclState_(bool global)
{
const FieldPropsManager* fp =
(global) ? &(eclState_.fieldProps()) :
&(eclState_.globalFieldProps());
std::array<bool,3> is_tran {fp->tran_active("TRANX"),
fp->tran_active("TRANY"),
fp->tran_active("TRANZ")};
if( !(is_tran[0] ||is_tran[1] || is_tran[2]) )
{
// Skip unneeded expensive traversals
return;
}
std::array<std::string, 3> keywords {"TRANX", "TRANY", "TRANZ"};
std::array<std::vector<double>,3> trans = createTransmissibilityArrays_(is_tran);
auto key = keywords.begin();
auto perform = is_tran.begin();
for (auto it = trans.begin(); it != trans.end(); ++it, ++key, ++perform)
{
if(*perform) {
if(grid_.maxLevel()>0) {
OPM_THROW(std::invalid_argument, "Calculations on TRANX/TRANY/TRANZ arrays are not support with LGRS, yet.");
}
fp->apply_tran(*key, *it);
}
}
resetTransmissibilityFromArrays_(is_tran, trans);
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
std::array<std::vector<double>,3>
Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
createTransmissibilityArrays_(const std::array<bool,3>& is_tran)
{
const auto& cartDims = cartMapper_.cartesianDimensions();
ElementMapper elemMapper(gridView_, Dune::mcmgElementLayout());
auto numElem = gridView_.size(/*codim=*/0);
std::array<std::vector<double>,3> trans =
{ std::vector<double>(is_tran[0] ? numElem : 0, 0),
std::vector<double>(is_tran[1] ? numElem : 0, 0),
std::vector<double>(is_tran[2] ? numElem : 0, 0)};
// compute the transmissibilities for all intersections
for (const auto& elem : elements(gridView_)) {
for (const auto& intersection : intersections(gridView_, elem)) {
// store intersection, this might be costly
if (!intersection.neighbor())
continue; // intersection is on the domain boundary
// In the EclState TRANX[c1] is transmissibility in X+
// direction. we only store transmissibilities in the +
// direction. Same for Y and Z. Ordering of compressed (c1,c2) and cartesian index
// (gc1, gc2) is coherent (c1 < c2 <=> gc1 < gc2) only in a serial run.
// In a parallel run this only holds in the interior as elements in the
// ghost overlap region might be ordered after the others. Hence we need
// to use the cartesian index to select the compressed index where to store
// the transmissibility value.
// c1 < c2 <=> gc1 < gc2 is no longer true (even in serial) when the grid is a
// CpGrid with LGRs. When cells c1 and c2 have the same parent
// cell on level zero, then gc1 == gc2.
unsigned c1 = elemMapper.index(intersection.inside());
unsigned c2 = elemMapper.index(intersection.outside());
int gc1 = cartMapper_.cartesianIndex(c1);
int gc2 = cartMapper_.cartesianIndex(c2);
if (std::tie(gc1, c1) > std::tie(gc2, c2))
// we only need to handle each connection once, thank you.
// We do this when gc1 is smaller than the other to find the
// correct place to store in parallel when ghost/overlap elements
// are ordered last
continue;
auto isID = details::isId(c1, c2);
// For CpGrid with LGRs, when leaf grid view cells with indices c1 and c2
// have the same parent cell on level zero, then gc2 - gc1 == 0. In that case,
// 'intersection.indexInSIde()' needed to be checked to determine the direction, i.e.
// add in the if/else-if 'gc2 == gc1 && intersection.indexInInside() == ... '
if ((gc2 - gc1 == 1 || (gc2 == gc1 && (intersection.indexInInside() == 0 || intersection.indexInInside() == 1)))
&& cartDims[0] > 1) {
if (is_tran[0])
// set simulator internal transmissibilities to values from inputTranx
trans[0][c1] = trans_[isID];
}
else if ((gc2 - gc1 == cartDims[0] || (gc2 == gc1 && (intersection.indexInInside() == 2 || intersection.indexInInside() == 3)))
&& cartDims[1] > 1) {
if (is_tran[1])
// set simulator internal transmissibilities to values from inputTrany
trans[1][c1] = trans_[isID];
}
else if (gc2 - gc1 == cartDims[0]*cartDims[1] ||
(gc2 == gc1 && (intersection.indexInInside() == 4 || intersection.indexInInside() == 5))) {
if (is_tran[2])
// set simulator internal transmissibilities to values from inputTranz
trans[2][c1] = trans_[isID];
}
//else.. We don't support modification of NNC at the moment.
}
}
return trans;
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
resetTransmissibilityFromArrays_(const std::array<bool,3>& is_tran,
const std::array<std::vector<double>,3>& trans)
{
const auto& cartDims = cartMapper_.cartesianDimensions();
ElementMapper elemMapper(gridView_, Dune::mcmgElementLayout());
// compute the transmissibilities for all intersections
for (const auto& elem : elements(gridView_)) {
for (const auto& intersection : intersections(gridView_, elem)) {
if (!intersection.neighbor())
continue; // intersection is on the domain boundary
// In the EclState TRANX[c1] is transmissibility in X+
// direction. we only store transmissibilities in the +
// direction. Same for Y and Z. Ordering of compressed (c1,c2) and cartesian index
// (gc1, gc2) is coherent (c1 < c2 <=> gc1 < gc2) only in a serial run.
// In a parallel run this only holds in the interior as elements in the
// ghost overlap region might be ordered after the others. Hence we need
// to use the cartesian index to select the compressed index where to store
// the transmissibility value.
// c1 < c2 <=> gc1 < gc2 is no longer true (even in serial) when the grid is a
// CpGrid with LGRs. When cells c1 and c2 have the same parent
// cell on level zero, then gc1 == gc2.
unsigned c1 = elemMapper.index(intersection.inside());
unsigned c2 = elemMapper.index(intersection.outside());
int gc1 = cartMapper_.cartesianIndex(c1);
int gc2 = cartMapper_.cartesianIndex(c2);
if (std::tie(gc1, c1) > std::tie(gc2, c2))
// we only need to handle each connection once, thank you.
// We do this when gc1 is smaller than the other to find the
// correct place to read in parallel when ghost/overlap elements
// are ordered last
continue;
auto isID = details::isId(c1, c2);
// For CpGrid with LGRs, when leaf grid view cells with indices c1 and c2
// have the same parent cell on level zero, then gc2 - gc1 == 0. In that case,
// 'intersection.indexInSIde()' needed to be checked to determine the direction, i.e.
// add in the if/else-if 'gc2 == gc1 && intersection.indexInInside() == ... '
if ((gc2 - gc1 == 1 || (gc2 == gc1 && (intersection.indexInInside() == 0 || intersection.indexInInside() == 1)))
&& cartDims[0] > 1) {
if (is_tran[0])
// set simulator internal transmissibilities to values from inputTranx
trans_[isID] = trans[0][c1];
}
else if ((gc2 - gc1 == cartDims[0] || (gc2 == gc1 && (intersection.indexInInside() == 2|| intersection.indexInInside() == 3)))
&& cartDims[1] > 1) {
if (is_tran[1])
// set simulator internal transmissibilities to values from inputTrany
trans_[isID] = trans[1][c1];
}
else if (gc2 - gc1 == cartDims[0]*cartDims[1] ||
(gc2 == gc1 && (intersection.indexInInside() == 4 || intersection.indexInInside() == 5))) {
if (is_tran[2])
// set simulator internal transmissibilities to values from inputTranz
trans_[isID] = trans[2][c1];
}
//else.. We don't support modification of NNC at the moment.
}
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
template<class Intersection>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
computeFaceProperties(const Intersection& intersection,
const int,
const int,
const int,
const int,
DimVector& faceCenterInside,
DimVector& faceCenterOutside,
DimVector& faceAreaNormal,
/*isCpGrid=*/std::false_type) const
{
// default implementation for DUNE grids
const auto& geometry = intersection.geometry();
faceCenterInside = geometry.center();
faceCenterOutside = faceCenterInside;
faceAreaNormal = intersection.centerUnitOuterNormal();
faceAreaNormal *= geometry.volume();
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
template<class Intersection>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
computeFaceProperties(const Intersection& intersection,
const int insideElemIdx,
const int insideFaceIdx,
const int outsideElemIdx,
const int outsideFaceIdx,
DimVector& faceCenterInside,
DimVector& faceCenterOutside,
DimVector& faceAreaNormal,
/*isCpGrid=*/std::true_type) const
{
int faceIdx = intersection.id();
if(grid_.maxLevel() == 0) {
faceCenterInside = grid_.faceCenterEcl(insideElemIdx, insideFaceIdx, intersection);
faceCenterOutside = grid_.faceCenterEcl(outsideElemIdx, outsideFaceIdx, intersection);
faceAreaNormal = grid_.faceAreaNormalEcl(faceIdx);
}
else {
if ((intersection.inside().level() != intersection.outside().level())) {
// For CpGrid with LGRs, intersection laying on the boundary of an LGR, having two neighboring cells:
// one coarse neighboring cell and one refined neighboring cell, we get the corresponding parent
// intersection (from level 0), and use the center of the parent intersection for the coarse
// neighboring cell.
// Get parent intersection and its geometry
const auto& parentIntersection = grid_.getParentIntersectionFromLgrBoundaryFace(intersection);
const auto& parentIntersectionGeometry = parentIntersection.geometry();
// For the coarse neighboring cell, take the center of the parent intersection.
// For the refined neighboring cell, take the 'usual' center.
faceCenterInside = (intersection.inside().level() == 0) ? parentIntersectionGeometry.center() :
grid_.faceCenterEcl(insideElemIdx, insideFaceIdx, intersection);
faceCenterOutside = (intersection.outside().level() == 0) ? parentIntersectionGeometry.center() :
grid_.faceCenterEcl(outsideElemIdx, outsideFaceIdx, intersection);
// For some computations, it seems to be benefitial to replace the actual area of the refined face, by
// the area of its parent face.
// faceAreaNormal = parentIntersection.centerUnitOuterNormal();
// faceAreaNormal *= parentIntersectionGeometry.volume();
/// Alternatively, the actual area of the refined face can be computed as follows:
faceAreaNormal = intersection.centerUnitOuterNormal();
faceAreaNormal *= intersection.geometry().volume();
}
else {
assert(intersection.inside().level() == intersection.outside().level());
faceCenterInside = grid_.faceCenterEcl(insideElemIdx, insideFaceIdx, intersection);
faceCenterOutside = grid_.faceCenterEcl(outsideElemIdx, outsideFaceIdx, intersection);
// When the CpGrid has LGRs, we compute the face area normal differently.
if (intersection.inside().level() > 0) { // remove intersection.inside().level() > 0
faceAreaNormal = intersection.centerUnitOuterNormal();
faceAreaNormal *= intersection.geometry().volume();
}
else {
faceAreaNormal = grid_.faceAreaNormalEcl(faceIdx);
}
}
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void
Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyPinchNncToGridTrans_(const std::unordered_map<std::size_t,int>& cartesianToCompressed)
{
// First scale NNCs with EDITNNC.
const auto& nnc_input = eclState_.getPinchNNC();
for (const auto& nncEntry : nnc_input) {
auto c1 = nncEntry.cell1;
auto c2 = nncEntry.cell2;
auto lowIt = cartesianToCompressed.find(c1);
auto highIt = cartesianToCompressed.find(c2);
int low = (lowIt == cartesianToCompressed.end())? -1 : lowIt->second;
int high = (highIt == cartesianToCompressed.end())? -1 : highIt->second;
if (low > high)
std::swap(low, high);
if (low == -1 && high == -1)
// Silently discard as it is not between active cells
continue;
if (low == -1 || high == -1) {
// We can end up here if one of the cells is overlap/ghost, because those
// are lacking connections to other cells in the ghost/overlap.
// Hence discard the NNC if it is between active cell and inactive cell
continue;
}
{
auto candidate = trans_.find(details::isId(low, high));
if (candidate != trans_.end()) {
// the correctly calculated transmissibility is stored in
// the NNC. Overwrite previous value with it.
candidate->second = nncEntry.trans;
}
}
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void
Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyNncToGridTrans_(const std::unordered_map<std::size_t,int>& cartesianToCompressed)
{
// First scale NNCs with EDITNNC.
const auto& nnc_input = eclState_.getInputNNC().input();
for (const auto& nncEntry : nnc_input) {
auto c1 = nncEntry.cell1;
auto c2 = nncEntry.cell2;
auto lowIt = cartesianToCompressed.find(c1);
auto highIt = cartesianToCompressed.find(c2);
int low = (lowIt == cartesianToCompressed.end())? -1 : lowIt->second;
int high = (highIt == cartesianToCompressed.end())? -1 : highIt->second;
if (low > high)
std::swap(low, high);
if (low == -1 && high == -1)
// Silently discard as it is not between active cells
continue;
if (low == -1 || high == -1) {
// Discard the NNC if it is between active cell and inactive cell
std::ostringstream sstr;
sstr << "NNC between active and inactive cells ("
<< low << " -> " << high << ") with globalcell is (" << c1 << "->" << c2 <<")";
OpmLog::warning(sstr.str());
continue;
}
{
auto candidate = trans_.find(details::isId(low, high));
if (candidate != trans_.end()) {
// NNC is represented by the grid and might be a neighboring connection
// In this case the transmissibilty is added to the value already
// set or computed.
candidate->second += nncEntry.trans;
}
}
// if (enableEnergy_) {
// auto candidate = thermalHalfTrans_.find(details::directionalIsId(low, high));
// if (candidate != trans_.end()) {
// // NNC is represented by the grid and might be a neighboring connection
// // In this case the transmissibilty is added to the value already
// // set or computed.
// candidate->second += nncEntry.transEnergy1;
// }
// auto candidate = thermalHalfTrans_.find(details::directionalIsId(high, low));
// if (candidate != trans_.end()) {
// // NNC is represented by the grid and might be a neighboring connection
// // In this case the transmissibilty is added to the value already
// // set or computed.
// candidate->second += nncEntry.transEnergy2;
// }
// }
// if (enableDiffusivity_) {
// auto candidate = diffusivity_.find(details::isId(low, high));
// if (candidate != trans_.end()) {
// // NNC is represented by the grid and might be a neighboring connection
// // In this case the transmissibilty is added to the value already
// // set or computed.
// candidate->second += nncEntry.transDiffusion;
// }
// }
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyEditNncToGridTrans_(const std::unordered_map<std::size_t,int>& globalToLocal)
{
const auto& input = eclState_.getInputNNC();
applyEditNncToGridTransHelper_(globalToLocal, "EDITNNC",
input.edit(),
[&input](const NNCdata& nnc){
return input.edit_location(nnc);},
// Multiply transmissibility with EDITNNC value
[](Scalar& trans, const Scalar& rhs){ trans *= rhs;});
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyEditNncrToGridTrans_(const std::unordered_map<std::size_t,int>& globalToLocal)
{
const auto& input = eclState_.getInputNNC();
applyEditNncToGridTransHelper_(globalToLocal, "EDITNNCR",
input.editr(),
[&input](const NNCdata& nnc){
return input.editr_location(nnc);},
// Replace Transmissibility with EDITNNCR value
[](Scalar& trans, const Scalar& rhs){ trans = rhs;});
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyEditNncToGridTransHelper_(const std::unordered_map<std::size_t,int>& globalToLocal,
const std::string& keyword,
const std::vector<NNCdata>& nncs,
const std::function<KeywordLocation(const NNCdata&)>& getLocation,
const std::function<void(Scalar&, const Scalar&)>& apply)
{
if (nncs.empty())
return;
const auto& cartDims = cartMapper_.cartesianDimensions();
auto format_ijk = [&cartDims](std::size_t cell) -> std::string {
auto i = cell % cartDims[0]; cell /= cartDims[0];
auto j = cell % cartDims[1];
auto k = cell / cartDims[1];
return fmt::format("({},{},{})", i + 1,j + 1,k + 1);
};
auto print_warning = [&format_ijk, &getLocation, &keyword] (const NNCdata& nnc) {
const auto& location = getLocation( nnc );
auto warning = fmt::format("Problem with {} keyword\n"
"In {} line {} \n"
"No NNC defined for connection {} -> {}", keyword, location.filename,
location.lineno, format_ijk(nnc.cell1), format_ijk(nnc.cell2));
OpmLog::warning(keyword, warning);
};
// editNnc is supposed to only reference non-neighboring connections and not
// neighboring connections. Use all entries for scaling if there is an NNC.
// variable nnc incremented in loop body.
auto nnc = nncs.begin();
auto end = nncs.end();
std::size_t warning_count = 0;
while (nnc != end) {
auto c1 = nnc->cell1;
auto c2 = nnc->cell2;
auto lowIt = globalToLocal.find(c1);
auto highIt = globalToLocal.find(c2);
if (lowIt == globalToLocal.end() || highIt == globalToLocal.end()) {
// Prevent warnings for NNCs stored on other processes in parallel (both cells inactive)
if ( lowIt != highIt && warnEditNNC_) {
print_warning(*nnc);
warning_count++;
}
++nnc;
continue;
}
auto low = lowIt->second, high = highIt->second;
if (low > high)
std::swap(low, high);
auto candidate = trans_.find(details::isId(low, high));
if (candidate == trans_.end() && warnEditNNC_) {
print_warning(*nnc);
++nnc;
warning_count++;
}
else {
// NNC exists
while (nnc!= end && c1==nnc->cell1 && c2==nnc->cell2) {
apply(candidate->second, nnc->trans);
++nnc;
}
}
}
if (warning_count > 0) {
auto warning = fmt::format("Problems with {} keyword\n"
"A total of {} connections not defined in grid", keyword, warning_count);
OpmLog::warning(warning);
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void
Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyNncMultreg_(const std::unordered_map<std::size_t,int>& cartesianToCompressed)
{
const auto& inputNNC = this->eclState_.getInputNNC();
const auto& transMult = this->eclState_.getTransMult();
auto compressedIdx = [&cartesianToCompressed](const std::size_t globIdx)
{
auto ixPos = cartesianToCompressed.find(globIdx);
return (ixPos == cartesianToCompressed.end()) ? -1 : ixPos->second;
};
// Apply region-based transmissibility multipliers (i.e., the MULTREGT
// keyword) to those transmissibilities that are directly assigned from
// the input.
//
// * NNC::input() covers the NNC keyword and any numerical aquifers
// * NNC::editr() covers the EDITNNCR keyword
//
// Note: We do not apply MULTREGT to the entries in NNC::edit() since
// those act as regular multipliers and have already been fully
// accounted for in the multiplier part of the main loop of update() and
// the applyEditNncToGridTrans_() member function.
for (const auto& nncList : { &NNC::input, &NNC::editr }) {
for (const auto& nncEntry : (inputNNC.*nncList)()) {
const auto c1 = nncEntry.cell1;
const auto c2 = nncEntry.cell2;
auto low = compressedIdx(c1);
auto high = compressedIdx(c2);
if ((low == -1) || (high == -1)) {
continue;
}
if (low > high) {
std::swap(low, high);
}
auto candidate = this->trans_.find(details::isId(low, high));
if (candidate != this->trans_.end()) {
candidate->second *= transMult.getRegionMultiplierNNC(c1, c2);
}
}
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
computeHalfTrans_(Scalar& halfTrans,
const DimVector& areaNormal,
int faceIdx, // in the reference element that contains the intersection
const DimVector& distance,
const DimMatrix& perm) const
{
assert(faceIdx >= 0);
unsigned dimIdx = faceIdx/2;
assert(dimIdx < dimWorld);
halfTrans = perm[dimIdx][dimIdx];
halfTrans *= std::abs(Dune::dot(areaNormal, distance));
halfTrans /= distance.two_norm2();
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
computeHalfDiffusivity_(Scalar& halfDiff,
const DimVector& areaNormal,
const DimVector& distance,
const Scalar& poro) const
{
halfDiff = poro;
halfDiff *= std::abs(Dune::dot(areaNormal, distance));
halfDiff /= distance.two_norm2();
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
typename Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::DimVector
Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
distanceVector_(const DimVector& faceCenter,
const unsigned& cellIdx) const
{
const auto& cellCenter = centroids_(cellIdx);
DimVector x = faceCenter;
for (unsigned dimIdx = 0; dimIdx < dimWorld; ++dimIdx)
x[dimIdx] -= cellCenter[dimIdx];
return x;
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyMultipliers_(Scalar& trans,
unsigned faceIdx,
unsigned cartElemIdx,
const TransMult& transMult) const
{
// apply multiplyer for the transmissibility of the face. (the
// face index is the index of the reference-element face which
// contains the intersection of interest.)
switch (faceIdx) {
case 0: // left
trans *= transMult.getMultiplier(cartElemIdx, FaceDir::XMinus);
break;
case 1: // right
trans *= transMult.getMultiplier(cartElemIdx, FaceDir::XPlus);
break;
case 2: // front
trans *= transMult.getMultiplier(cartElemIdx, FaceDir::YMinus);
break;
case 3: // back
trans *= transMult.getMultiplier(cartElemIdx, FaceDir::YPlus);
break;
case 4: // bottom
trans *= transMult.getMultiplier(cartElemIdx, FaceDir::ZMinus);
break;
case 5: // top
trans *= transMult.getMultiplier(cartElemIdx, FaceDir::ZPlus);
break;
}
}
template<class Grid, class GridView, class ElementMapper, class CartesianIndexMapper, class Scalar>
void Transmissibility<Grid,GridView,ElementMapper,CartesianIndexMapper,Scalar>::
applyNtg_(Scalar& trans,
unsigned faceIdx,
unsigned elemIdx,
const std::vector<double>& ntg) const
{
// apply multiplyer for the transmissibility of the face. (the
// face index is the index of the reference-element face which
// contains the intersection of interest.)
switch (faceIdx) {
case 0: // left
trans *= ntg[elemIdx];
break;
case 1: // right
trans *= ntg[elemIdx];
break;
case 2: // front
trans *= ntg[elemIdx];
break;
case 3: // back
trans *= ntg[elemIdx];
break;
// NTG does not apply to top and bottom faces
}
}
} // namespace Opm
#endif // OPM_TRANSMISSIBILITY_IMPL_HPP
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