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opm-upscaling/examples/cpchop.cpp
Bård Skaflestad 85e6d32704 Upscaling utilities: Don't hard-code numeric conversion factor 
This commit replaces the hard-coded conversion factor from mD to
m**2 (metres squared) with an expression based on the Units.hpp
facility of module opm-core.

Note: This may introduce slight changes to the upscaling result due
to reduced rounding error in the unit conversions.
2014-10-15 15:19:35 +02:00

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/*
Copyright 2010 SINTEF ICT, Applied Mathematics.
Copyright 2010 Statoil ASA.
This file is part of the Open Porous Media project (OPM).
OPM is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OPM is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with OPM. If not, see <http://www.gnu.org/licenses/>.
*/
#include <config.h>
#include <opm/core/io/eclipse/CornerpointChopper.hpp>
#include <opm/core/io/eclipse/EclipseGridInspector.hpp>
#include <opm/upscaling/SinglePhaseUpscaler.hpp>
#include <opm/core/utility/MonotCubicInterpolator.hpp>
#include <opm/porsol/common/setupBoundaryConditions.hpp>
#include <opm/core/utility/Units.hpp>
#include <boost/random/mersenne_twister.hpp>
#include <boost/random/uniform_int.hpp>
#include <boost/random/uniform_real.hpp>
#include <boost/random/variate_generator.hpp>
#include <ios>
#include <iomanip>
#include <sys/utsname.h>
#include <ctime>
#include <sstream>
#include <fstream>
#include <iostream>
#include <cfloat>
#include <cmath>
#include <dune/common/version.hh>
#if DUNE_VERSION_NEWER(DUNE_COMMON, 2, 3)
#include <dune/common/parallel/mpihelper.hh>
#else
#include <dune/common/mpihelper.hh>
#endif
int main(int argc, char** argv)
try
{
if (argc == 1) {
std::cout << "Usage: cpchop gridfilename=filename.grdecl [subsamples=10] [ilen=5] [jlen=5] " << std::endl;
std::cout << " [zlen=5] [imin=] [imax=] [jmin=] [jmax=] [upscale=true] [bc=fixed]" << std::endl;
std::cout << " [resettoorigin=true] [seed=111] [minperm=1e-9] " << std::endl;
std::cout << " [dips=false] [azimuthdisplacement=] [satnumvolumes=false] [mincellvolume=1e-9]" << std::endl;
std::cout << " [filebase=] [resultfile=] [endpoints=false] [cappres=false]" << std::endl;
std::cout << " [rock_list=] [anisotropicrocks=false]" << std::endl;
exit(1);
}
Dune::MPIHelper::instance(argc, argv);
Opm::parameter::ParameterGroup param(argc, argv);
std::string gridfilename = param.get<std::string>("gridfilename");
Opm::CornerPointChopper ch(gridfilename);
// The cells with i coordinate in [imin, imax) are included, similar for j.
// The z limits may be changed inside the chopper to match actual min/max z.
const int* dims = ch.dimensions();
int imin = param.getDefault("imin", 0);
int imax = param.getDefault("imax", dims[0]);
int jmin = param.getDefault("jmin", 0);
int jmax = param.getDefault("jmax", dims[1]);
double zmin = param.getDefault("zmin", ch.zLimits().first);
double zmax = param.getDefault("zmax", ch.zLimits().second);
int subsamples = param.getDefault("subsamples", 1);
int ilen = param.getDefault("ilen", imax - imin);
int jlen = param.getDefault("jlen", jmax - jmin);
double zlen = param.getDefault("zlen", zmax - zmin);
bool upscale = param.getDefault("upscale", true);
std::string bc = param.getDefault<std::string>("bc", "fixed");
bool resettoorigin = param.getDefault("resettoorigin", true);
boost::mt19937::result_type userseed = param.getDefault("seed", 0);
int outputprecision = param.getDefault("outputprecision", 8);
std::string filebase = param.getDefault<std::string>("filebase", "");
std::string resultfile = param.getDefault<std::string>("resultfile", "");
double minperm = param.getDefault("minperm", 1e-9);
double minpermSI = Opm::unit::convert::from(minperm, Opm::prefix::milli*Opm::unit::darcy);
// Following two options are for dip upscaling (slope of cell top and bottom edges)
bool dips = param.getDefault("dips", false); // whether to do dip averaging
double azimuthdisplacement = param.getDefault("azimuthdisplacement", 0.0); // posibility to add/subtract a value to/from azimuth for dip plane.
double mincellvolume = param.getDefault("mincellvolume", 1e-9); // ignore smaller cells for dip calculations
bool satnumvolumes = param.getDefault("satnumvolumes", false); // whether to count volumes pr. satnum
// upscaling of endpoints and capillary pressure
// Conversion factor, multiply mD numbers with this to get m² numbers
const double milliDarcyToSqMetre =
Opm::unit::convert::to(1.0*Opm::prefix::milli*Opm::unit::darcy,
Opm::unit::square(Opm::unit::meter));
// Input for surfaceTension is dynes/cm, SI units are Joules/square metre
const double surfaceTension = param.getDefault("surfaceTension", 11.0) * 1e-3; // multiply with 10^-3 to obtain SI units
bool endpoints = param.getDefault("endpoints", false); // whether to upscale saturation endpoints
bool cappres = param.getDefault("cappres", false); // whether to upscale capillary pressure
if (cappres) { endpoints = true; }
std::string rock_list = param.getDefault<std::string>("rock_list", "no_list");
bool anisorocks = param.getDefault("anisotropicrocks", false);
std::vector<std::vector<double> > rocksatendpoints_;
std::vector<std::vector<double> > jfuncendpoints_; // Used if isotropic rock input
int nsatpoints = 5; // nuber of saturation points in upscaled capillary pressure function per subsample
double saturationThreshold = 0.00001;
// For isotropic input rocks:
std::vector<Opm::MonotCubicInterpolator> InvJfunctions; // Holds the inverse of the loaded J-functions.
// For anisotropic input rocks:
std::vector<Opm::MonotCubicInterpolator> SwPcfunctions; // Holds Sw(Pc) for each rocktype.
// Read rock data from files specifyed in rock_list
if (endpoints) {
if (!rock_list.compare("no_list")) {
std::cout << "Can't do endponts without rock list (" << rock_list << ")" << std::endl;
throw std::exception();
}
// Code copied from ReservoirPropertyCommon.hpp for file reading
std::ifstream rl(rock_list.c_str());
if (!rl) {
OPM_THROW(std::runtime_error, "Could not open file " << rock_list);
}
int num_rocks = -1;
rl >> num_rocks;
assert(num_rocks >= 1);
rocksatendpoints_.resize(num_rocks, std::vector<double>(2, 0.0));
jfuncendpoints_.resize(num_rocks, std::vector<double>(2, 0.0));
// Loop through rock files defined in rock_list and store the data we need
for (int i = 0; i < num_rocks; ++i) {
std::string spec;
while (spec.empty()) {
std::getline(rl, spec);
}
// Read the contents of the i'th rock
std::istringstream specstream(spec);
std::string rockname;
specstream >> rockname;
std::string rockfilename = rockname;
std::ifstream rock_stream(rockfilename.c_str());
if (!rock_stream) {
OPM_THROW(std::runtime_error, "Could not open file " << rockfilename);
}
if (! anisorocks) { //Isotropic input rocks (Sw Krw Kro J)
Opm::MonotCubicInterpolator Jtmp;
try {
Jtmp = Opm::MonotCubicInterpolator(rockname, 1, 4);
}
catch (const char * errormessage) {
std::cerr << "Error: " << errormessage << std::endl;
std::cerr << "Check filename" << std::endl;
exit(1);
}
// Invert J-function, now we get saturation as a function of pressure:
if (Jtmp.isStrictlyMonotone()) {
InvJfunctions.push_back(Opm::MonotCubicInterpolator(Jtmp.get_fVector(), Jtmp.get_xVector()));
}
else {
std::cerr << "Error: Jfunction " << i+1 << " in rock file " << rockname << " was not invertible." << std::endl;
exit(1);
}
jfuncendpoints_[i][0] = Jtmp.getMinimumX().second;
jfuncendpoints_[i][1] = Jtmp.getMaximumX().second;
rocksatendpoints_[i][0] = Jtmp.getMinimumX().first;
rocksatendpoints_[i][1] = Jtmp.getMaximumX().first;
if (rocksatendpoints_[i][0] < 0 || rocksatendpoints_[i][0] > 1) {
OPM_THROW(std::runtime_error, "Minimum rock saturation (" << rocksatendpoints_[i][0] << ") not sane for rock "
<< rockfilename << "." << std::endl << "Did you forget to specify anisotropicrocks=true ?");
}
}
else { //Anisotropic input rocks (Pc Sw Krxx Kryy Krzz)
Opm::MonotCubicInterpolator Pctmp;
try {
Pctmp = Opm::MonotCubicInterpolator(rockname, 2, 1);
}
catch (const char * errormessage) {
std::cerr << "Error: " << errormessage << std::endl;
std::cerr << "Check filename and columns 1 and 2 (Pc and Sw)" << std::endl;
exit(1);
}
if (cappres) {
// Invert Pc(Sw) curve into Sw(Pc):
if (Pctmp.isStrictlyMonotone()) {
SwPcfunctions.push_back(Opm::MonotCubicInterpolator(Pctmp.get_fVector(), Pctmp.get_xVector()));
}
else {
std::cerr << "Error: Pc(Sw) curve " << i+1 << " in rock file " << rockname << " was not invertible." << std::endl;
exit(1);
}
}
rocksatendpoints_[i][0] = Pctmp.getMinimumX().first;
rocksatendpoints_[i][1] = Pctmp.getMaximumX().first;
}
}
}
if (param.has("z_tolerance")) {
std::cerr << "****** Warning: z_tolerance parameter is obsolete, use PINCH in deck input instead\n";
}
double residual_tolerance = param.getDefault("residual_tolerance", 1e-8);
int linsolver_verbosity = param.getDefault("linsolver_verbosity", 0);
#if DUNE_VERSION_NEWER(DUNE_ISTL, 2, 3) || defined(HAS_DUNE_FAST_AMG)
int linsolver_type = param.getDefault("linsolver_type", 3);
#else
int linsolver_type = param.getDefault("linsolver_type", 1);
#endif
// Guarantee initialization
double Pcmax = -DBL_MAX, Pcmin = DBL_MAX;
// Check that we do not have any user input
// that goes outside the coordinates described in
// the cornerpoint file (runtime-exception will be thrown in case of error)
ch.verifyInscribedShoebox(imin, ilen, imax,
jmin, jlen, jmax,
zmin, zlen, zmax);
// Random number generator from boost.
boost::mt19937 gen;
// Seed the random number generators with the current time, unless specified on command line
// Warning: Current code does not allow 0 for the seed!!
boost::mt19937::result_type autoseed = time(NULL);
if (userseed == 0) {
gen.seed(autoseed);
}
else {
gen.seed(userseed);
}
Opm::SinglePhaseUpscaler::BoundaryConditionType bctype = Opm::SinglePhaseUpscaler::Fixed;
bool isFixed, isPeriodic;
isFixed = isPeriodic = false;
if (upscale) {
if (bc == "fixed") {
isFixed = true;
bctype = Opm::SinglePhaseUpscaler::Fixed;
}
else if (bc == "periodic") {
isPeriodic = true;
bctype = Opm::SinglePhaseUpscaler::Periodic;
}
else {
std::cout << "Boundary condition type (bc=" << bc << ") not allowed." << std::endl;
std::cout << "Only bc=fixed or bc=periodic implemented." << std::endl;
throw std::exception();
}
}
// Check for unused parameters (potential typos).
if (param.anyUnused()) {
std::cout << "***** WARNING: Unused parameters: *****\n";
param.displayUsage();
}
// Note that end is included in interval for uniform_int.
boost::uniform_int<> disti(imin, imax - ilen);
boost::uniform_int<> distj(jmin, jmax - jlen);
boost::uniform_real<> distz(zmin, std::max(zmax - zlen, zmin));
boost::variate_generator<boost::mt19937&, boost::uniform_int<> > ri(gen, disti);
boost::variate_generator<boost::mt19937&, boost::uniform_int<> > rj(gen, distj);
boost::variate_generator<boost::mt19937&, boost::uniform_real<> > rz(gen, distz);
// Storage for results
std::vector<double> porosities;
std::vector<double> netporosities;
std::vector<double> ntgs;
std::vector<double> swcrs;
std::vector<double> sowcrs;
std::vector<double> permxs;
std::vector<double> permys;
std::vector<double> permzs;
std::vector<double> permyzs;
std::vector<double> permxzs;
std::vector<double> permxys;
std::vector<double> minsws, maxsws;
std::vector<std::vector<double> > pcvalues;
std::vector<double> dipangs, azimuths;
// Initialize a matrix for subsample satnum volumes.
// Outer index is subsample index, inner index is SATNUM-value
std::vector<std::vector<double> > rockvolumes;
int maxSatnum = 0; // This value is determined from the chopped cells.
int finished_subsamples = 0; // keep explicit count of successful subsamples
for (int sample = 1; sample <= subsamples; ++sample) {
int istart = ri();
int jstart = rj();
double zstart = rz();
ch.chop(istart, istart + ilen, jstart, jstart + jlen, zstart, zstart + zlen, resettoorigin);
std::string subsampledgrdecl = filebase;
// Output grdecl-data to file if a filebase is supplied.
if (filebase != "") {
std::ostringstream oss;
if ((size_t) subsamples > 1) { // Only add number to filename if more than one sample is asked for
oss << 'R' << std::setw(4) << std::setfill('0') << sample;
subsampledgrdecl += oss.str();
}
subsampledgrdecl += ".grdecl";
ch.writeGrdecl(subsampledgrdecl);
}
try { /* The upscaling may fail to converge on icky grids, lets just pass by those */
if (upscale) {
Opm::DeckConstPtr subdeck = ch.subDeck();
Opm::SinglePhaseUpscaler upscaler;
upscaler.init(subdeck, bctype, minpermSI,
residual_tolerance, linsolver_verbosity, linsolver_type, false);
Opm::SinglePhaseUpscaler::permtensor_t upscaled_K = upscaler.upscaleSinglePhase();
upscaled_K *= (1.0/(Opm::prefix::milli*Opm::unit::darcy));
porosities.push_back(upscaler.upscalePorosity());
if (ch.hasNTG()) {
netporosities.push_back(upscaler.upscaleNetPorosity());
ntgs.push_back(upscaler.upscaleNTG());
}
if (ch.hasSWCR()) {
swcrs.push_back(upscaler.upscaleSWCR(ch.hasNTG()));
}
if (ch.hasSOWCR()) {
sowcrs.push_back(upscaler.upscaleSOWCR(ch.hasNTG()));
}
permxs.push_back(upscaled_K(0,0));
permys.push_back(upscaled_K(1,1));
permzs.push_back(upscaled_K(2,2));
permyzs.push_back(upscaled_K(1,2));
permxzs.push_back(upscaled_K(0,2));
permxys.push_back(upscaled_K(0,1));
}
if (endpoints) {
// Calculate minimum and maximum water volume in each cell based on input pc-curves per rock type
// Create single-phase upscaling object to get poro and perm values from the grid
Opm::DeckConstPtr subdeck = ch.subDeck();
std::vector<double> perms = subdeck->getKeyword("PERMX")->getRawDoubleData();
Opm::SinglePhaseUpscaler upscaler;
upscaler.init(subdeck, bctype, minpermSI,
residual_tolerance, linsolver_verbosity, linsolver_type, false);
std::vector<int> satnums = subdeck->getKeyword("SATNUM")->getIntData();
std::vector<double> poros = subdeck->getKeyword("PORO")->getSIDoubleData();
std::vector<double> cellVolumes, cellPoreVolumes;
cellVolumes.resize(satnums.size(), 0.0);
cellPoreVolumes.resize(satnums.size(), 0.0);
int tesselatedCells = 0;
//double maxSinglePhasePerm = 0;
double Swirvolume = 0;
double Sworvolume = 0;
const std::vector<int>& ecl_idx = upscaler.grid().globalCell();
Dune::CpGrid::Codim<0>::LeafIterator c = upscaler.grid().leafbegin<0>();
for (; c != upscaler.grid().leafend<0>(); ++c) {
unsigned int cell_idx = ecl_idx[c->index()];
if (satnums[cell_idx] > 0) { // Satnum zero is "no rock"
cellVolumes[cell_idx] = c->geometry().volume();
cellPoreVolumes[cell_idx] = cellVolumes[cell_idx] * poros[cell_idx];
double Pcmincandidate = 0.0, Pcmaxcandidate = 0.0, minSw, maxSw;
if (!anisorocks) {
if (cappres) {
Pcmincandidate = jfuncendpoints_[int(satnums[cell_idx])-1][1]
/ sqrt(perms[cell_idx] * milliDarcyToSqMetre/poros[cell_idx]) * surfaceTension;
Pcmaxcandidate = jfuncendpoints_[int(satnums[cell_idx])-1][0]
/ sqrt(perms[cell_idx] * milliDarcyToSqMetre/poros[cell_idx]) * surfaceTension;
}
minSw = rocksatendpoints_[int(satnums[cell_idx])-1][0];
maxSw = rocksatendpoints_[int(satnums[cell_idx])-1][1];
}
else { // anisotropic input, we do not to J-function scaling
if (cappres) {
Pcmincandidate = SwPcfunctions[int(satnums[cell_idx])-1].getMinimumX().first;
Pcmaxcandidate = SwPcfunctions[int(satnums[cell_idx])-1].getMaximumX().first;
}
minSw = rocksatendpoints_[int(satnums[cell_idx])-1][0];
maxSw = rocksatendpoints_[int(satnums[cell_idx])-1][1];
}
if (cappres) {
Pcmin = std::min(Pcmincandidate, Pcmin);
Pcmax = std::max(Pcmaxcandidate, Pcmax);
}
Swirvolume += minSw * cellPoreVolumes[cell_idx];
Sworvolume += maxSw * cellPoreVolumes[cell_idx];
}
++tesselatedCells; // keep count.
}
// If upscling=false, we still (may) want to have porosities together with endpoints
if (!upscale) {
porosities.push_back(upscaler.upscalePorosity());
}
// Total porevolume and total volume -> upscaled porosity:
double poreVolume = std::accumulate(cellPoreVolumes.begin(),
cellPoreVolumes.end(),
0.0);
double Swir = Swirvolume/poreVolume;
double Swor = Sworvolume/poreVolume;
minsws.push_back(Swir);
maxsws.push_back(Swor);
if (cappres) {
// Upscale capillary pressure function
Opm::MonotCubicInterpolator WaterSaturationVsCapPressure;
double largestSaturationInterval = Swor-Swir;
double Ptestvalue = Pcmax;
while (largestSaturationInterval > (Swor-Swir)/double(nsatpoints)) {
if (Pcmax == Pcmin) {
// This is a dummy situation, we go through once and then
// we are finished (this will be triggered by zero permeability)
Ptestvalue = Pcmin;
largestSaturationInterval = 0;
}
else if (WaterSaturationVsCapPressure.getSize() == 0) {
/* No data values previously computed */
Ptestvalue = Pcmax;
}
else if (WaterSaturationVsCapPressure.getSize() == 1) {
/* If only one point has been computed, it was for Pcmax. So now
do Pcmin */
Ptestvalue = Pcmin;
}
else {
/* Search for largest saturation interval in which there are no
computed saturation points (and estimate the capillary pressure
that will fall in the center of this saturation interval)
*/
std::pair<double,double> SatDiff = WaterSaturationVsCapPressure.getMissingX();
Ptestvalue = SatDiff.first;
largestSaturationInterval = SatDiff.second;
}
// Check for saneness of Ptestvalue:
if (std::isnan(Ptestvalue) || std::isinf(Ptestvalue)) {
std::cerr << "ERROR: Ptestvalue was inf or nan" << std::endl;
break; // Jump out of while-loop, just print out the results
// up to now and exit the program
}
double waterVolume = 0.0;
for (unsigned int i = 0; i < ecl_idx.size(); ++i) {
unsigned int cell_idx = ecl_idx[i];
double waterSaturationCell = 0.0;
if (satnums[cell_idx] > 0) { // handle "no rock" cells with satnum zero
double PtestvalueCell;
PtestvalueCell = Ptestvalue;
if (!anisorocks) {
double Jvalue = sqrt(perms[cell_idx] * milliDarcyToSqMetre /poros[cell_idx]) * PtestvalueCell / surfaceTension;
waterSaturationCell
= InvJfunctions[int(satnums[cell_idx])-1].evaluate(Jvalue);
}
else { // anisotropic_input, then we do not do J-function-scaling
waterSaturationCell = SwPcfunctions[int(satnums[cell_idx])-1].evaluate(PtestvalueCell);
}
}
waterVolume += waterSaturationCell * cellPoreVolumes[cell_idx];
}
WaterSaturationVsCapPressure.addPair(Ptestvalue, waterVolume/poreVolume);
}
WaterSaturationVsCapPressure.chopFlatEndpoints(saturationThreshold);
std::vector<double> wattest = WaterSaturationVsCapPressure.get_fVector();
std::vector<double> cprtest = WaterSaturationVsCapPressure.get_xVector();
Opm::MonotCubicInterpolator CapPressureVsWaterSaturation(WaterSaturationVsCapPressure.get_fVector(),
WaterSaturationVsCapPressure.get_xVector());
std::vector<double> pcs;
for (int satp=0; satp<nsatpoints; ++satp) {
pcs.push_back(CapPressureVsWaterSaturation.evaluate(Swir+(Swor-Swir)/(nsatpoints-1)*satp));
}
pcvalues.push_back(pcs);
}
}
if (dips) {
Opm::DeckConstPtr subdeck = ch.subDeck();
std::vector<int> griddims(3);
Opm::DeckRecordConstPtr specgridRecord(subdeck->getKeyword("SPECGRID")->getRecord(0));
griddims[0] = specgridRecord->getItem("NX")->getInt(0);
griddims[1] = specgridRecord->getItem("NY")->getInt(0);
griddims[2] = specgridRecord->getItem("NZ")->getInt(0);
std::vector<double> xdips_subsample, ydips_subsample;
Opm::EclipseGridInspector gridinspector(subdeck);
for (int k=0; k < griddims[2]; ++k) {
for (int j=0; j < griddims[1]; ++j) {
for (int i=0; i < griddims[0]; ++i) {
if (gridinspector.cellVolumeVerticalPillars(i, j, k) > mincellvolume) {
std::pair<double,double> xydip = gridinspector.cellDips(i, j, k);
xdips_subsample.push_back(xydip.first);
ydips_subsample.push_back(xydip.second);
}
}
}
}
// double azimuth = atan(xydip.first/xydip.second);
// double dip = acos(1.0/sqrt(pow(xydip.first,2.0)+pow(xydip.second,2.0)+1.0));
// dips_subsample.push_back( xydip.first );
// azims_subsample.push_back(atan(xydip.first/xydip.second));
// Average xdips and ydips
double xdipaverage = accumulate(xdips_subsample.begin(), xdips_subsample.end(), 0.0)/xdips_subsample.size();
double ydipaverage = accumulate(ydips_subsample.begin(), ydips_subsample.end(), 0.0)/ydips_subsample.size();
// Convert to dip and azimuth
double azimuth = atan(xdipaverage/ydipaverage)+azimuthdisplacement;
double dip = acos(1.0/sqrt(pow(xdipaverage,2.0)+pow(ydipaverage,2.0)+1.0));
dipangs.push_back(dip);
azimuths.push_back(azimuth);
}
if (satnumvolumes) {
Opm::DeckConstPtr subdeck = ch.subDeck();
Opm::EclipseGridInspector subinspector(subdeck);
std::vector<int> griddims(3);
Opm::DeckRecordConstPtr specgridRecord(subdeck->getKeyword("SPECGRID")->getRecord(0));
griddims[0] = specgridRecord->getItem("NX")->getInt(0);
griddims[1] = specgridRecord->getItem("NY")->getInt(0);
griddims[2] = specgridRecord->getItem("NZ")->getInt(0);
int number_of_subsamplecells = griddims[0] * griddims[1] * griddims[2];
// If SATNUM is non-existent in input grid, this will fail:
std::vector<int> satnums = subdeck->getKeyword("SATNUM")->getIntData();
std::vector<double> rockvolumessubsample;
for (int cell_idx=0; cell_idx < number_of_subsamplecells; ++cell_idx) {
maxSatnum = std::max(maxSatnum, int(satnums[cell_idx]));
rockvolumessubsample.resize(maxSatnum); // Ensure long enough vector
rockvolumessubsample[int(satnums[cell_idx])-1] += subinspector.cellVolumeVerticalPillars(cell_idx);
}
// Normalize volumes to obtain relative volumes:
double subsamplevolume = std::accumulate(rockvolumessubsample.begin(),
rockvolumessubsample.end(), 0.0);
std::vector<double> rockvolumessubsample_normalized;
for (size_t satnum_idx = 0; satnum_idx < rockvolumessubsample.size(); ++satnum_idx) {
rockvolumessubsample_normalized.push_back(rockvolumessubsample[satnum_idx]/subsamplevolume);
}
rockvolumes.push_back(rockvolumessubsample_normalized);
}
finished_subsamples++;
}
catch (...) {
std::cerr << "Warning: Upscaling chopped subsample nr. " << sample << " failed, proceeding to next subsample\n";
}
}
// Make stream of output data, to be outputted to screen and optionally to file
std::stringstream outputtmp;
outputtmp << "################################################################################################" << std::endl;
outputtmp << "# Results from property analysis on subsamples" << std::endl;
outputtmp << "#" << std::endl;
time_t now = time(NULL);
outputtmp << "# Finished: " << asctime(localtime(&now));
utsname hostname; uname(&hostname);
outputtmp << "# Hostname: " << hostname.nodename << std::endl;
outputtmp << "#" << std::endl;
outputtmp << "# Options used:" << std::endl;
outputtmp << "# gridfilename: " << gridfilename << std::endl;
outputtmp << "# i; min,len,max: " << imin << " " << ilen << " " << imax << std::endl;
outputtmp << "# j; min,len,max: " << jmin << " " << jlen << " " << jmax << std::endl;
outputtmp << "# z; min,len,max: " << zmin << " " << zlen << " " << zmax << std::endl;
outputtmp << "# subsamples: " << subsamples << std::endl;
if (userseed == 0) {
outputtmp << "# (auto) seed: " << autoseed << std::endl;
}
else {
outputtmp << "# (manual) seed: " << userseed << std::endl;
}
outputtmp << "################################################################################################" << std::endl;
outputtmp << "# id";
if (upscale) {
if (isPeriodic) {
if (ch.hasNTG()) {
outputtmp << " porosity netporosity ntg permx permy permz permyz permxz permxy netpermh";
}
else {
outputtmp << " porosity permx permy permz permyz permxz permxy";
}
}
else if (isFixed) {
if (ch.hasNTG()) {
outputtmp << " porosity netporosity ntg permx permy permz netpermh";
}
else {
outputtmp << " porosity permx permy permz";
}
}
if (ch.hasSWCR()) {
outputtmp << " swcr ";
}
if (ch.hasSOWCR()) {
outputtmp << " sowcr ";
}
}
if (endpoints) {
if (!upscale) {
if (ch.hasNTG()) {
outputtmp << " porosity netporosity ntg";
}
else {
outputtmp << " porosity";
}
}
outputtmp << " Swir Swor";
if (cappres) {
outputtmp << " Pc(Swir) Pc2 Pc3 Pc4 Pc(Swor)";
}
}
if (dips) {
outputtmp << " dip azim(displacement:" << azimuthdisplacement << ")";
}
if (satnumvolumes) {
for (int satnumidx = 0; satnumidx < maxSatnum; ++satnumidx) {
outputtmp << " satnum_" << satnumidx+1;
}
}
outputtmp << std::endl;
const int fieldwidth = outputprecision + 8;
for (int sample = 1; sample <= finished_subsamples; ++sample) {
outputtmp << sample << '\t';
if (upscale) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << porosities[sample-1] << '\t';
if (ch.hasNTG()) {
outputtmp << std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << netporosities[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << ntgs[sample-1] << '\t';
}
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << permxs[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << permys[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << permzs[sample-1] << '\t';
if (isPeriodic) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << permyzs[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << permxzs[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << permxys[sample-1] << '\t';
}
if (ch.hasNTG()) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << (permxs[sample-1]+permys[sample-1])/(2.0*ntgs[sample-1]) << '\t';
}
if (ch.hasSWCR()) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << swcrs[sample-1] << '\t';
}
if (ch.hasSOWCR()) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << sowcrs[sample-1] << '\t';
}
}
if (endpoints) {
if (!upscale) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << porosities[sample-1] << '\t';
if (ch.hasNTG()) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << netporosities[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << ntgs[sample-1] << '\t';
}
}
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << minsws[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << maxsws[sample-1];
if (cappres) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << pcvalues[sample-1][0] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << pcvalues[sample-1][1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << pcvalues[sample-1][2] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << pcvalues[sample-1][3] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << pcvalues[sample-1][4];
}
}
if (dips) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << dipangs[sample-1] << '\t' <<
std::showpoint << std::setw(fieldwidth) << std::setprecision(outputprecision) << azimuths[sample-1];
}
if (satnumvolumes) {
rockvolumes[sample-1].resize(maxSatnum, 0.0);
for (int satnumidx = 0; satnumidx < maxSatnum; ++satnumidx) {
outputtmp <<
std::showpoint << std::setw(fieldwidth) <<
std::setprecision(outputprecision) << rockvolumes[sample-1][satnumidx] << '\t';
}
}
outputtmp << std::endl;
}
if (resultfile != "") {
std::cout << "Writing results to " << resultfile << std::endl;
std::ofstream outfile;
outfile.open(resultfile.c_str(), std::ios::out | std::ios::trunc);
outfile << outputtmp.str();
outfile.close();
}
std::cout << outputtmp.str();
}
catch (const std::exception &e) {
std::cerr << "Program threw an exception: " << e.what() << "\n";
throw;
}
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