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Author SHA1 Message Date
Ray Speth 7d3488a973 Add AnyMap.keys_str function 2019-06-25 22:30:59 -04:00
Ray Speth afd5d82280 [Input] Provide context lines in YAML parsing error messages 2019-06-25 22:30:59 -04:00
Ray Speth a32e32b7d7 Remove AnyMap traversal using "/" as a path delimiter 
This feature was unused, and interfered with the use of "/" as a delimiter
for YAML keys indicating keys in other input files.
 2019-06-25 22:30:59 -04:00
Ray Speth e28c9add21 Add variants of AnyValue.asMap for accessing lists of maps 2019-06-25 22:30:59 -04:00
Ray Speth 71bf44d11f [Input] Parse YAML entries for Species objects 2019-06-25 22:30:59 -04:00
Ray Speth 84fa231ea2 [Input] Read local 'units' definitions in reaction and thermo entries 
Move 'convert' functions that work with missing keys to AnyMap class.
 2019-06-25 22:30:59 -04:00
Ray Speth 6e3053dd1c Add function for setting default units from a std::map 
This is the form that will be used when reading units from a YAML
input file.
 2019-06-25 22:30:59 -04:00
Ray Speth 4c5040e829 [Input] Parse YAML entries for piecewise Gibbs (Mu0Poly) species thermo 2019-06-25 22:30:59 -04:00
Ray Speth f0bb0d2262 Make AnyMap iterable 2019-06-25 22:30:59 -04:00
Ray Speth 86c73dad20 [Input] Parse YAML entries for constant cp species thermo 2019-06-25 22:30:59 -04:00
Ray Speth 74eec731f1 Add a version of UnitSystem.convert that handles default values 2019-06-25 22:30:59 -04:00
Ray Speth 7211f08891 [Input] Parse YAML entries for NASA 9-coefficient polynomials 2019-06-25 22:30:59 -04:00
Ray Speth 7ff6e8fac2 [Input] Parse YAML entries for Shomate polynomials 2019-06-25 22:30:59 -04:00
Ray Speth 2b41486850 [Input] Parse YAML entries for NASA 7-coefficient polynomials 2019-06-25 22:30:59 -04:00
Ray Speth 3eaa32dea3 [Thermo] Make SpeciesThermoInterpType objects default constructible 
Also provide setters for all all parameters which were set by the
constructor.
 2019-06-25 22:30:59 -04:00
Ray Speth aef101fee7 [Input] Parse YAML entries for Chebyshev reactions 2019-06-25 22:30:59 -04:00
Ray Speth 7a97ff9917 Add optional length check when converting AnyValue to vector 2019-06-25 22:30:59 -04:00
Ray Speth 24d1e86440 Improve "missing key" error message for AnyMap 2019-06-25 22:30:59 -04:00
Ray Speth b54ea8bd82 [Input] Parse YAML entries for Plog reactions 2019-06-25 22:30:59 -04:00
Ray Speth d476ad8e59 Use Boost to demangle type names in AnyValue casting errors 2019-06-25 22:30:59 -04:00
Ray Speth cb31c297cf [Input] Parse YAML entries for falloff and chemically activated reactions 2019-06-25 22:30:59 -04:00
Ray Speth 8b502d4065 [Input] Parse YAML entries for three body reactions 2019-06-25 22:30:59 -04:00
Ray Speth 0220e11ef9 Allow conversion from long int to double in AnyValue.asMap 2019-06-25 22:30:59 -04:00
Ray Speth de80f06887 [Input] Parse YAML entries for elementary reactions 2019-06-25 22:30:59 -04:00
Ray Speth 224c46ebbb Add functions for converting units from AnyValue instances 2019-06-25 22:30:59 -04:00
Ray Speth 65121becac Add special handling of activation energies to class Units 2019-06-25 22:30:59 -04:00
Ray Speth da097631e3 UnitSystem class supports default source units for conversions 2019-06-25 22:30:59 -04:00
Ray Speth c9b7de3b70 Add support for metric prefixes to class Units 2019-06-25 22:30:59 -04:00
Ray Speth b8cb2c30f8 Add 'Units' class for doing conversions with dimensionality checks 
Introduces a new, more natural notation for writing unit strings,
for use in YAML input files. Unlike 'toSI', conversions are checked for
dimensional consistency.
 2019-06-25 22:30:59 -04:00
Ray Speth ea88d4f9fb Add "get" functions to AnyMap 
Simplify the common use case of checking for a key and using a default
value when it is missing.
 2019-06-25 22:30:59 -04:00
Ray Speth 530adbb931 Add automatic conversions to vector<AnyValue> 2019-06-25 22:30:59 -04:00
Ray Speth e5bd0b136f Allow AnyValue to convert implicitly from long int to double 2019-06-25 22:30:59 -04:00
Ray Speth 00f6b88fa4 [Input] Implement construction of AnyMap from YAML string/file 2019-06-25 22:30:59 -04:00
Ray Speth e85e0e2108 Fix constness of some AnyMap functions 2019-06-25 22:30:59 -04:00
Ray Speth ed24198e63 Add option to compile yaml-cpp or use system library 2019-06-25 22:30:59 -04:00
Ray Speth 4bd1ca1cde Add yaml-cpp submodule 2019-06-25 22:30:59 -04:00
Ray Speth 56cb190a64 Fix units of site density in sofc.cti 2019-06-25 22:30:59 -04:00
Bryan W. Weber 444ef91e0f Build the samples on the CI services 
Requires libomp on macOS from homebrew. OpenMP with Visual C/C++ requires
the loop index to be a signed type (from OpenMP < 3.0).
 2019-06-17 10:29:20 -04:00
Bryan W. Weber 142f533229 Correct flag and libs for OpenMP on macOS 
Apple's clang on macOS requires the libomp to link. Apple symlinks gcc
to clang, so it can't be detected as clang by executable name
 2019-06-17 10:29:20 -04:00
Bryan W. Weber 3588be16f3 CMake use Accelerate even if OpenMP is also used 
For samples, make sure that OpenMP and Accelerate are not exclusive
options on macOS
 2019-06-17 10:29:20 -04:00
Bryan W. Weber 007ecf0c7c Include boost_inc_dir when building the samples 2019-06-17 10:29:20 -04:00
Bryan W. Weber 857bb0a769 Include Func1.h in zerodim.h 
zerodim.h used to have Func1.h included indirectly, so make it explicit.
 2019-06-17 10:29:20 -04:00
Bryan W. Weber 9a5c2708e5 Replace the compiler variables during conda build 
The build compilers should not be specified into the sample templates
 2019-06-13 14:36:54 -04:00
Bryan W. Weber 265032da8f Remove build-system specific env vars on macOS 
The isysroot and mmacosx-min-version flags are needed to build the
Cantera library, but not to actually use it on macOS. They should be
removed because users don't need these and should use the SDK installed
with XCode.
 2019-06-13 14:36:54 -04:00
Steven DeCaluwe ba8ac1d519 Mark ConstDensityThermo for deprecation. 
The thermophase ConstDensityThermo instantiates a class with
constant density_mass  Such a model is of dubious physical
validity/applicability and has minimal foreseeable use cases.
This commit marks it for deprecation, and adds a message in
ctml_writer.py (where the model has the misleading alias
'incompressible_solid') refering the interested user to consider
appropriate alternate thermophase classes 'lattice' or
'IdealSolidSoln.'
 2019-06-12 17:54:48 -04:00
Steven DeCaluwe fb3dee36c5 Removing references to incompressible_solid in sofc.cti 
Removes references to incompressible_solid phase in the codebase.
This phase type references ConstDensityThermo phase, which is a
non-physical model and is to be deprecated, with Cantera 2.5. In
order to enable deprecation, the following changes are hereby made:

- Changes oxide_bulk phase type from incompressible_solid to lattice in sofc.cti
- Changes test_convert.py so that it interrogates the density_mole of the bulk_oxide, rather than density_mass
 2019-06-12 17:54:48 -04:00
Steven DeCaluwe 813d5064ae Enabling Lattice thermo phase via cti interface. 2019-06-12 17:54:48 -04:00
Steven DeCaluwe 0ed2b38594 Adding faradayconstant.m to Matlab toolbox 2019-06-08 17:33:30 -04:00
Thanasis Mattas 6a42e5942e rearranging methods to aid src reading 2019-06-08 17:25:55 -04:00
Thanasis Mattas ea3bb0af90 Some documentation corrections at xml.h 2019-06-08 17:25:55 -04:00