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Author SHA1 Message Date
Ray Speth 97156ffad5 [Python] Handle deprecation warnings from all sources consistently 
Since deprecation warnings issued from C++ and from Cython code are shown by
default, set deprecation warnings issued from Python code to do the same.

Also, modify handling of Cython- and Python- issued deprecation warnings when
calling the make_deprecation_warnings_fatal and suppress_deprecation_warnings
functions.
 2020-02-12 13:45:53 -05:00
Ingmar Schoegl 53eca8e559 [Input] Move remaining chemkin input files to test/data 2020-02-04 21:34:15 -05:00
Ingmar Schoegl ae1f20a8dd [Input] Remove chemkin input files not needed for unit tests 2020-02-04 21:34:15 -05:00
Ingmar Schoegl b74f11bfd0 Fix cantera version 2020-01-27 16:54:26 -05:00
Ray Speth b7591cb403 [Doc] Small improvements to YAML API docs 2020-01-21 15:50:26 -05:00
Ray Speth d5f84e99ed [Thermo] Fix pure fluid state restoration after property calculation 
After calculating properties using finite differences (e.g. cp), the fluid was
returned to its original state by setting the state in terms of pressure and
temperature. However, because setting the state using these variables is an
iterative calculation with some error tolerance, the state was not restored
exactly. By restoring the state based on the initial temperature and density,
the restored state is identical to the initial state.
 2020-01-21 15:50:26 -05:00
Ray Speth 6d06da5df2 [Input] Make string-based instantiation of LatticeSolid possible 2020-01-21 15:50:26 -05:00
Ray Speth 3eeed6327a [Input] Make string-based instantiation of IonsFromNeutral possible 2020-01-21 15:50:26 -05:00
Ray Speth cc2066a043 [Input] Move Debye-Huckel species parameters to their own sub-field 2020-01-21 15:50:26 -05:00
Ray Speth 43ad8bd892 Standardize names used for pure substance models 
Ensure that the name returned by Sub::name() is a name that can be used to
reconstruct a substance of the same type.

Make phase names in liquidvapor.yaml match the substance model names.
 2020-01-21 15:50:26 -05:00
Ray Speth c4d5a17fea [Input] Use more general data structure for AnyMap metadata 2020-01-21 15:50:26 -05:00
Ray Speth 50d4cb9660 Add 'clear' method to AnyMap 2020-01-21 15:50:26 -05:00
Ray Speth a285e615a2 [Input] Fix reading of long integers in YAML files 2020-01-21 15:50:26 -05:00
Ray Speth 70f92d87bb Make use of AnyValue equality comparisons 2020-01-21 15:50:26 -05:00
Ray Speth 8b1155a243 [Kinetics] Fix creation of surface reactions depending on phase order 
The first phase in a Kinetics object is not necessarily the reacting phase
for Kinetics objects loaded from CTI/XML files, but is for YAML files.
 2020-01-21 15:50:26 -05:00
Ray Speth 902ec6aa7e Handle equality comparisons for types converted by AnyValue 2020-01-21 15:50:26 -05:00
Ray Speth 9b81b1ad16 Implement equality comparisons for AnyValue / AnyMap 2020-01-21 15:50:26 -05:00
Ray Speth 73c51126c7 [Input] Make YAML designated names canonical for factories 2020-01-21 15:50:26 -05:00
Ray Speth 37c899e43b Add functions for factory alias management 
This allows for error checking at the time of adding the alias, as well as
providing a public interface for adding aliases.
 2020-01-21 15:50:26 -05:00
Ray Speth 24b34fedb4 Make canonical names of factory-registered types accessible 2020-01-21 15:50:26 -05:00
Ray Speth 38ad1cda8e [Input] Skip over hidden keys when iterating over AnyMap 2020-01-21 15:50:26 -05:00
Ray Speth e916fa7b22 [Input] Allow 'equation-of-state' field to contain multiple model options 2020-01-21 15:50:26 -05:00
Ray Speth f0684875be Make treating AnyMap as vector<AnyMap> easier in some cases 
For entries that are lists of maps in the general case but often only contain
one item, it is convenient to allow them to be provided as just a map. This
modifies methods used to work with vectors of AnyMap objects to handle the
case where the child object is just a map.
 2020-01-21 15:50:26 -05:00
Ingmar Schoegl f79d619d8a Fix typo 2020-01-13 22:07:43 -05:00
Ray Speth 4eb375e069 [Thermo] Deprecate "potential energy" property of IdealSolidSolnPhase 2020-01-11 12:19:20 -05:00
Ray Speth 9ac5da298c Remove some un-Pythonic parentheses 2020-01-11 12:19:20 -05:00
Ray Speth 961b50101d [Examples] Remove incorrect comment about transport model setup 2020-01-11 12:19:20 -05:00
Ray Speth 9e84845202 Remove references to previously-removed Semiconductor class 2020-01-11 12:19:20 -05:00
Ray Speth 5bf5a794d2 Fix compiler warnings raised by Visual Studio and Clang 2020-01-11 12:19:20 -05:00
Ray Speth 7657bf1c1c Remove unused variable from class CVodesIntegrator 2020-01-11 12:19:20 -05:00
Ray Speth 66f80971d6 [Test] Fix warning from use of deprecated "TX" property 2020-01-11 12:19:20 -05:00
Ray Speth 1c178299e6 Fix Doxygen warnings generated in ct_defs.h 2020-01-11 12:19:20 -05:00
Ray Speth 9dc4d55b7a [CI] Install numpy for Python 2 so CSV diff tests can run on Travis 2020-01-11 12:19:20 -05:00
Ray Speth f70ecc379f Fix some spelling errors 2020-01-11 12:19:20 -05:00
Ray Speth 1bdced1b17 Bump version to 2.5.0a4 2020-01-11 12:19:20 -05:00
Ray Speth 69257433db [Test] Include non-numeric text in test_problems comparisons 2020-01-10 13:39:05 -05:00
Ingmar Schoegl 358195ea9e [Reactor] Update Cython interface for mass_flow_rate 
- introduce MassFlowController.mass_flow_rate as property
- deprecate MassFlowController.set_mass_flow_rate
 2020-01-08 16:27:28 -05:00
Ingmar Schoegl be89e929b2 [Reactor] Re-introduce setMassFlowRate for MassFlowController 
- mask deprecated FlowDevice::setMassFlowRate
 2020-01-08 16:27:28 -05:00
Ingmar Schoegl 573d19d57d [Reactor] Update formatting of warn_deprecated messages 2020-01-08 16:27:28 -05:00
Ingmar Schoegl 5970c4d184 [Samples] Replace deprecated method in Cxx combustor example 2020-01-08 16:27:28 -05:00
Ingmar Schoegl c39b302001 Update AUTHORS list 2020-01-08 14:56:48 -05:00
Ingmar Schoegl fc7cc9135e Update templates 
- redirect 'Feature Requests' to Cantera/enhancements
- wrap instructions in HTML comment
- avoid unintended line breaks in preformatted text
 2020-01-08 14:56:48 -05:00
Bryan W. Weber 6ccefcbcd7 [Examples] Formatting changes 
Add requirements to all Python examples. Update formatting to resolve
some PEP8 problems.
 2020-01-07 09:59:53 -05:00
Bryan W. Weber d020feb668 [YAML] Add deprecated field to YAML files and phases 2020-01-07 09:59:53 -05:00
Bryan W. Weber aaa6cdd38d [Cython] Set python_requires in setup.py 2020-01-07 09:59:53 -05:00
Bryan W. Weber 0b95001897 [YAML] Add descriptions to YAML files 
In many cases, these are copied from the corresponding CTI file. In some
cases, the source of the data is unknown and these are also noted.
 2020-01-07 09:59:53 -05:00
Bryan W. Weber 6f04e71711 [cti2yaml] Reformat species-level notes 
Remove newlines and strip leading and trailing spaces to reformat the
comment into a single line.
 2020-01-07 09:59:53 -05:00
Bryan W. Weber 7f4f99cce9 [Cython] Use context manager for csvfiles 
Python best practices are to use the with statement to manage opening
and closing files. The Python docs recommend specifying newline=''
to avoid certain problems with Windows-style carriage returns. See
https://docs.python.org/3/library/csv.html#id3
 2020-01-07 09:59:53 -05:00
Bryan W. Weber 1866e3542d [YAML] Switch interfaces and examples to use YAML files 2020-01-07 09:59:53 -05:00
Bryan W. Weber 54bb4c300e [MATLAB/Examples] Remove transport1.m example 
It is a near duplicate of prandtl1.m
 2020-01-07 09:59:53 -05:00