Commit Graph

10987 Commits

Author SHA1 Message Date
Bang-Shiuh Chen
f29bdf022d [phase] add m_distNum to record change of electron energy distribution 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
2ac3682fc0 [reaction] fix the doc for the boltzmannn equation description 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
192fd64cf3 [sample, data] add plasma.py and oxygen-plasma-itikawa.yaml 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
fd6ae0571a [test] add test_convert.py 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
4b2c2e865b [test] add test_electron_collision_plasma 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
da64d8f66c [test] add TestElectronCollisionPlasmaReaction 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
31a5d91f66 [input] add lxcat2yaml.py 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
76f7a814d4 [test] add ElectronCollisionPlasmaFromYaml 2024-03-28 10:55:04 -04:00
Bang-Shiuh Chen
2c170d8d9d [reaction, interface] add ElectronCollisionPlasmaRate 2024-03-28 10:55:04 -04:00
Ingmar Schoegl
71f517dcb2 Bump version to 3.1.0a2 2024-03-28 09:28:45 -04:00
Ingmar Schoegl
eb8cde648c [MATLAB-legacy] Add warnings for legacy MATLAB removal 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
2517d6d1d5 [MATLAB-legacy] Remove obsolete installation instructions 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
b24c9e84d9 [MATLAB-legacy] Remove MATLAB-legacy docs 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
4b4e790f5a [MATLAB-legacy] Remove samples 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
e9215e6600 [MATLAB-legacy] Remove MATLAB from build system 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
41d7ca6c43 [MATLAB-legacy] Remove references to MATLAB 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
0303dba060 [MATLAB-legacy] Remove MATLAB from doc build 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
5b8a0a4ecc [MATLAB-legacy] Remove ext/matlab_xunit 2024-03-28 09:27:10 -04:00
Ingmar Schoegl
5e275fc63d [MATLAB-legacy] Remove toolbox interface 2024-03-28 09:27:10 -04:00
Bryan Weber
d49d6f522c [CI] Add Homebrew-based post-merge test
Use Homebrew to install Python for a post-merge test. This represents
the most likely path for people compiling on macOS using a Homebrew
Python. I deliberately didn't add all the other Python version
combinations from the old test because I don't think we should encourage
that route.

Fix PEP 668 errors

Install numpy with brew for tests
2024-03-15 17:55:17 -04:00
Bryan Weber
4c19713864 [CI] Fix the macos-14 test runner
Use the GitHub Actions setup-python action. This seems easier to support
than the homebrew route used previously. I ran into problems with SCons
finding the right dependencies and such, whereas this route did not have
such problems.
2024-03-15 17:55:17 -04:00
Ingmar Schoegl
02811b02d7 [CI] Test macos-14 runner 2024-03-15 17:55:17 -04:00
Christopher Neal
64df109577 improved python test and formatting changes to doc strings 2024-03-11 19:43:32 -04:00
Christopher Neal
bc50dd7ce0 updates to interface and added a test for the Python interface 2024-03-11 19:43:32 -04:00
Christopher Neal
fcf275eb30 [thermo] changed name of auxiliary data access methods & updated docstrings 2024-03-11 19:43:32 -04:00
Christopher Neal
2c51a20773 changed to AnyMap return type & updated method names 2024-03-11 19:43:32 -04:00
Christopher Neal
5c2ac7cea6 [thermo] initial exposing of Peng-Robinson eos parameters to python interface 2024-03-11 19:43:32 -04:00
ThorstenZirwes
66835e2d8d [1D] Add option for mass fraction gradient fluxes 2024-03-09 22:04:55 -05:00
Ray Speth
64ed2b7323 [CI] Fix pip commands for Windows runners 2024-02-25 18:49:31 -06:00
Ray Speth
872dbd3c87 [CI] Fix processing of coverage test outputs
Already fixed upstream (https://github.com/gcovr/gcovr/pull/883), so
future versions of gcovr should work fine.
2024-02-25 18:49:31 -06:00
Ingmar Schoegl
80b308b30c [ck2yaml] Improve error message for missing gas phase 2024-02-24 17:29:17 -06:00
Ingmar Schoegl
55e316206c [unittest] Write output in work directory 2024-02-24 17:29:17 -06:00
Ingmar Schoegl
a599b58a8f Fix glitch in matlab_experimental readme.md 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
cfcb2f2f80 Address review comments 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
497926bcb2 [clib] Create alternative reactor_new3 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
cda3c30590 [0D] Prepare newReactor with contents 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
2b4c7d0c87 [Python] Deprecate instantiation of Reactors without content 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
dc98dfe5f5 [samples] Discontinue use of zeroD insert 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
e70790adbe [matlab] Use reactor_setSolution in experimental toolbox 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
3bc6a4befe [unittest] Update unit tests 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
c61870b066 [clib] Add reactor_setSolution 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
e9034d9061 [Python] Assign Solution to zeroD directly 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
32f9ea6ec8 [0D] Deprecate zeroD insert 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
c348fef4a9 [0D] Consolidate zeroD insert methods 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
8841f11c83 [0D] Inherit constructors 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
9da6bdb984 [0D] Add Solution to ReactorBase 2024-02-20 21:56:45 -05:00
Ingmar Schoegl
71e4ccba6d [samples] Use numpy.trapz instead of scipy version
Avoids DeprecationWarning: "'scipy.integrate.trapz' is deprecated
in favour of 'scipy.integrate.trapezoid' and will be removed in
SciPy 1.14.0".
2024-01-23 18:54:17 -05:00
Ingmar Schoegl
b62d83ba6e [doc] Update Doxyfile version
Update Doxyfile based on template for doxygen 1.9.7
2024-01-23 18:54:17 -05:00
Ingmar Schoegl
ea1c026373 [CI] Pin doxygen=1.9.7
Starting with doxygen >1.9.7, the 'modules' page is no longer generated.
2024-01-23 18:54:17 -05:00
Ingmar Schoegl
ff8c3f8f54 [CI] Use doxygen provided from conda-forge 2024-01-23 18:54:17 -05:00