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Copy Doxygen output into a subdirectory of Sphinx so the Sphinx index can be the full site index. Partially addresses Cantera/cantera-website#229
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Reference
This pages provide detailed reference documentation for Cantera.
Programming Reference
These sections document the classes and functions that define the Cantera interface for each available programming language, as well as the structure of Cantera's YAML mechanism files.
:gutter: 3
```{grid-item-card} YAML Format Reference
:link: yaml/index
:link-type: doc
:text-align: center
```
```{grid-item-card} Python API Reference
:link: cython/index
:link-type: doc
:text-align: center
```
```{grid-item-card} Matlab API Reference
:link: matlab/index
:link-type: doc
:text-align: center
```
```{grid-item-card} C++ API Reference
:link: cxx/index.html
:text-align: center
```
:hidden:
:maxdepth: 1
:caption: API Reference
yaml/index
cython/index
matlab/index
Science Reference
These sections document the scientific theories, mathematical models, and numerical methods implemented by Cantera
:gutter: 3
```{grid-item-card} Reactors
:link: reference/science/reactors/index
:link-type: doc
:text-align: center
```
:hidden:
:maxdepth: 1
:caption: Science Reference
reference/science/reactors/index