LBPM/sample_scripts/config_build_eos

# Clear all modules (except modules)
#for var in ${LOADEDMODULES//:/ }; do  if [ " ${var///*/}" != " modules" ];  then  module unload " ${var///*/}" > /dev/null 2>&1;  fi; done

source $MODULESHOME/init/bash
# Set the modules and enviornmental variables
module unload PrgEnv-intel
module load PrgEnv-gnu/6.0.4
module unload gcc cmake
module load gcc/6.3.0
module load cray-hdf5-parallel/1.10.2.0
module load cray-netcdf-hdf5parallel
module load mercurial git
module load cmake3/3.6.1

export LD_LIBRARY_PATH=/usr/lib64:/lustre/atlas/proj-shared/geo106/eos/netcdf/lib:/lustre/atlas/proj-shared/geo106/eos/zlib/lib:/lustre/atlas/proj-shared/geo106/eos/hdf5/lib:$LD_LIBRARY_PATH

export MPICH_RDMA_ENABLED_CUDA=0

echo $GNU_VERSION
module list

# Remove CMake files from previous configures
rm -rf CMake*


# Configure
cmake                                        \
    -D CMAKE_BUILD_TYPE:STRING=Release       \
    -D CMAKE_C_COMPILER:PATH=cc              \
    -D CMAKE_CXX_COMPILER:PATH=CC            \
    -D CMAKE_CXX_COMPILER:PATH=CC            \
    -D CMAKE_CXX_FLAGS="-fPIC"		         \
    -D CMAKE_CXX_STANDARD=14					                \
    -D USE_TIMER=false			     \
    -D TIMER_DIRECTORY=${HOME}/timerutility/build/opt  \
       -D MPIEXEC=aprun                      \
       -D USE_EXT_MPI_FOR_SERIAL_TESTS:BOOL=TRUE \
    -D USE_CUDA=0                            \
       -D CUDA_FLAGS="-arch sm_35"           \
    -D USE_SILO=1					                \
        -D SILO_DIRECTORY=/lustre/atlas/proj-shared/geo106/eos/silo \
        -D HDF5_DIRECTORY=/lustre/atlas/proj-shared/geo106/eos/hdf5 \
        -D HDF5_LIB=/lustre/atlas/proj-shared/geo106/eos/hdf5/lib/libhdf5.a \
    -D USE_NETCDF=1						    \
       -D NETCDF_DIRECTORY=/lustre/atlas/proj-shared/geo106/eos/netcdf \
       -D CMAKE_SKIP_RPATH=true		     \
    ~/LBPM-WIA

#    -D PREFIX=$MEMBERWORK/geo106/eos-LBPM-WIA  \

#-D CUDA_HOST_COMPILER="/usr/bin/gcc"  \


# Build the code
make install -j 8

# Fix permissions
#chmod -R g+w $PROJWORK/geo106/eos-LBPM-WIA


# Run the fast tests
# ctest -E WEEKLY


# Run the slow tests
# ctest -R WEEKLY -VV