Commit Graph

52 Commits

Author SHA1 Message Date
Rex Zhe Li
2357cd9dfa update options for tolerance_method 2021-09-13 09:20:52 -04:00
Rex Zhe Li
101105c7ae print out info on what tolerance_method is used 2021-09-13 06:11:22 -04:00
Rex Zhe Li
50395a14e9 PoissonSolver with sum or max MSE should work now after fixing dumb bugs 2021-09-13 05:38:42 -04:00
Rex Zhe Li
65b0d12172 add MES_max as alternative method to check convergence;to be verified 2021-09-13 19:24:23 +10:00
Rex Zhe Li
a75ca8a132 Merge branch 'electrokinetic_UpdatedPBTol' of github.com:JamesEMcClure/LBPM-WIA into electrokinetic_UpdatedPBTol 2021-09-13 18:46:55 +10:00
Rex Zhe Li
d19e4f1047 save the work;incomplete 2021-09-13 18:46:44 +10:00
Rex Zhe Li
172f66a169 PoissonSolver using MSE as stopping criterion should work now 2021-09-13 04:45:37 -04:00
Rex Zhe Li
44fa670fb1 change convergence method to MSE 2021-09-13 17:53:15 +10:00
Rex Zhe Li
0aefd3e456 fix more bugs but still need to verify 2021-09-09 09:32:57 -04:00
Rex Zhe Li
878760ed0a fix a few bugs and pass build; to be verified 2021-09-09 08:04:11 -04:00
Rex Zhe Li
c74b803157 initialize a new convergence scheme for Poisson solver 2021-09-09 15:48:25 +10:00
James McClure
ee34677826 xMerge branch 'master' into FOM_dev 2021-05-20 11:38:05 -04:00
Rex Zhe Li
c7c36b5e86 fix minor bug in unit conversion in PoissonSolver 2021-05-20 09:21:55 -04:00
Mark Berrill
3cdfb7caf6 Minor changes to PoissonSolver 2021-05-17 12:26:29 -04:00
Mark Berrill
a2b22e5e47 Fixing bug in PoissonSolver 2021-05-17 12:00:40 -04:00
Rex Zhe Li
ad5d428ce3 clean redundant code in Poisson solver 2021-05-07 01:54:45 -04:00
Mark Berrill
5c27e3830a Fixing compile errors without MPI 2021-02-12 13:43:26 -05:00
Rex Zhe Li
fef81a0e47 resolve merge conflicts 2021-01-18 22:51:16 -05:00
Rex Zhe Li
e0416a676c merge with electrokinetic and resolve merge conflicts 2021-01-14 05:20:47 -05:00
JamesEMcclure
0fe3125833 merging multi-halo 2021-01-13 21:44:23 -05:00
Rex Zhe Li
432fab95b3 test done;add sine and cosine voltage input for Poisson solver 2021-01-06 01:03:18 -05:00
James McClure
7f4f74779c fix the build 2021-01-05 18:43:44 -05:00
James McClure
5bcc10c5fb refactor new models to FOM 2021-01-05 13:51:32 -05:00
James McClure
77c2949b07 werkin 2021-01-05 00:15:36 -05:00
Rex Zhe Li
2b9d776113 save the work; to be compiled, tested and validated; add sine and cosine voltage input for Poisson solver 2021-01-04 20:13:48 -05:00
James McClure
9826ef5624 adding silo vis capabilities to electrochem 2020-12-29 14:04:43 -05:00
Rex Zhe Li
7ef18bfea3 make the WriteLog in PoissonSolver a bool type to facilitate input 2020-12-04 00:37:02 -05:00
Rex Zhe Li
7cc2be826e PoissonSolver: remove extra setSlice for halo layer in Initialize() 2020-10-18 12:20:15 -04:00
Rex Zhe Li
21a0ec8c0b add a routine to write convergence log for Poisson solver 2020-10-16 12:50:28 -04:00
Rex Zhe Li
b5f9ad5a6c PoissonSolver: remove extra setSlice for halo layer in Initialize() 2020-10-15 11:54:26 -04:00
JamesEMcclure
35447181df merging multi-halo with electrokinetic 2020-10-09 15:19:59 -04:00
Rex Zhe Li
d40de38c48 save the work;results needs to be validated 2020-10-05 11:03:35 -04:00
Rex Zhe Li
e529caf6fe finish BC tweak 2020-09-25 17:02:16 -04:00
James McClure
fd27b3138a tweak BC conventions 2020-09-23 14:53:46 -04:00
Rex Zhe Li
11e9af54b6 CPU only;finish preliminary work on testing Poisson and Ion models and their coupling 2020-09-11 22:56:00 -04:00
Rex Zhe Li
20c8cc9c3b update PoissonSolver and fix numerous bugs 2020-09-02 11:37:23 -04:00
Rex Zhe Li
86a1bb81a1 resolve merge conflict 2020-08-28 21:58:29 -04:00
Rex Zhe Li
0a7b1c331b further clean up the code 2020-08-28 21:53:41 -04:00
JamesEMcclure
a7afd9b429 fix poisson solver for unit test 2020-08-28 13:37:36 -04:00
James McClure
75e8647051 re-factor electric solvers for unit testing 2020-08-28 13:31:43 -04:00
Rex Zhe Li
aa26fcafda fix miscellaneous bugs and update the data structure of electric potential 2020-08-28 11:15:55 -04:00
Rex Zhe Li
59ffd7bfd6 fix several miscellaneous bugs 2020-08-20 22:47:10 -04:00
Rex Zhe Li
5756d6f138 fix a few trivial bugs; add some checkpoint print; still debugging 2020-08-18 12:40:41 -04:00
Rex Zhe Li
771f679f5c add output; CPU version compiled; to be tested 2020-08-17 09:59:22 -04:00
Rex Zhe Li
85fc59190c save the work;CPU version compiled; to be tested 2020-08-16 11:20:11 -04:00
Rex Zhe Li
3adde14ecf resolve merge conflicts 2020-08-14 14:26:32 -04:00
Rex Zhe Li
3a162849a0 save the work;untested 2020-08-14 14:23:22 -04:00
James McClure
30014a49c0 add zeta potential to Poisson 2020-08-11 16:52:56 -04:00
Rex Zhe Li
dff4e3d536 save the work;to be continued 2020-08-07 17:44:02 -04:00
James McClure
d9cde3c76c use generalized D3Q7 MPI structures for multi-ion 2020-08-06 16:12:18 -04:00