OilfieldToolsNet/LBPM
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  • 3289bf336b test only with HDF5 master James McClure 2023-10-23 05:03:11 -0400
  • 12a9496a7e clean up James McClure 2023-10-23 04:19:15 -0400
  • 1ed3428ef6 re-run clang format James McClure 2023-10-23 04:18:20 -0400
  • 88897e73e2 Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA James McClure 2023-10-23 04:13:07 -0400
  • 83f543e7a6 import ScaLBL updates James McClure 2023-10-22 11:05:05 -0400
  • 588d1a15c1 updates from ScaLBL James McClure 2023-10-22 09:53:45 -0400
  • 7394e7ff33 fix bug in capillary flux computation James McClure 2023-08-29 19:34:23 -0400
  • f574140a16 :Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA James McClure 2023-05-28 12:33:51 -0400
  • 58405353c6 convert int to size_t for dist_mem_size James McClure 2023-05-28 11:59:10 -0400
  • e7b9407586 Merge branch 'master' into SYCL SYCL James McClure 2023-04-03 15:49:34 -0400
  • 2989e890fa fixing merge James McClure 2023-04-03 09:05:33 -0400
  • 68e475fdf8 make sure permeability always includes square of porosity James McClure 2023-04-03 08:49:19 -0400
  • ae9885266b set fractional flow increment for seed water James McClure 2023-03-30 15:31:17 -0400
  • b09731a5ef Migrated SYCL port with Makefile config amitkumarhyd 2023-03-24 05:34:19 -0700
  • bf076ca633 Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA into merge James McClure 2023-01-21 08:48:25 -0500
  • 2a8724f42d update sample script James McClure 2023-01-21 08:48:21 -0500
  • b2994deeb8 Merge branch 'master' of github.com:OPM/LBPM James McClure 2023-01-21 08:43:42 -0500
  • 161da74bbb update cell docs James McClure 2023-01-18 07:22:33 -0500
  • b0d4f54efc update cell do s James McClure 2023-01-17 09:02:55 -0500
  • 4a90275a14 fix bullet list in cell doc James McClure 2023-01-16 15:43:48 -0500
  • b6617f7730 add membrane to cell model doc James McClure 2023-01-16 15:41:53 -0500
  • e803cdfa9d add membrane to cell model doc James McClure 2023-01-16 15:38:47 -0500
  • 7e286f16f1 update docs for cell model James McClure 2023-01-16 13:29:58 -0500
  • 57736ced88 create cell model James McClure 2023-01-16 07:19:20 -0500
  • b2ac66739f update nernst-planck docs James McClure 2023-01-16 07:18:58 -0500
  • 720e7fa195 add potential BC for poisson James McClure 2022-11-02 16:25:14 -0400
  • ce7714071f clena up James McClure 2022-11-02 15:55:58 -0400
  • 17698b7dd5 fix for hip poisson James McClure 2022-10-29 13:57:54 -0400
  • 9749600540 fix poisson cuda James E McClure 2022-10-29 13:55:30 -0400
  • 14c1037d7d add GPU voltage bc James McClure 2022-10-28 07:20:45 -0400
  • 111529ff5e add voltage BC for d3q19 poisson solver James McClure 2022-10-27 08:15:21 -0400
  • 95233d61a7 update configure script James McClure 2022-10-26 20:24:56 -0400
  • 79484ab8fa update poisson solver James McClure 2022-10-26 20:24:45 -0400
  • 613a43c309 vis capabilities for poisson, default d3q19 James McClure 2022-10-26 16:17:23 -0400
  • f1ceb930ee working on read/write for membrane coefficients James McClure 2022-10-26 16:16:59 -0400
  • fac681dffe
         Rc 08.15.2022 (#70) James E. McClure 2022-09-07 15:44:16 -0400
  • e9096dbfc3 update docs James McClure 2022-08-31 14:08:59 -0400
  • ffe4f794de fix swc stuff try 3 James McClure 2022-08-27 16:30:03 -0400
  • 9229de2875 fix swc stuff try 2 James McClure 2022-08-27 16:06:30 -0400
  • fc4af2d712 fix swc thing James McClure 2022-08-27 15:40:32 -0400
  • 372ebd3af2 add flat field to accelerate Poisson James McClure 2022-08-25 15:46:47 -0400
  • 045a955626 fix cuda thing James E McClure 2022-08-22 22:00:19 -0400
  • b423bcb42b minor cleanup of gpu poisson James McClure 2022-08-21 08:53:05 -0400
  • 2b2bdee447 fix error in gpu poisson James McClure 2022-08-16 11:23:30 -0400
  • d69bff263c fix minor merge conflict James McClure 2022-08-15 05:17:47 -0400
  • 4a016eee6c porosity factor in effperm James McClure 2022-08-12 18:34:50 -0400
  • d50c98c71a porosity factor in effperm James McClure 2022-08-12 18:33:49 -0400
  • 6ad23248fd porosity factor in effperm James McClure 2022-08-12 18:31:53 -0400
  • 189408f769 porosity factor in effperm James McClure 2022-08-12 18:29:45 -0400
  • f233ec616b fix workflow indentation James McClure 2022-08-07 09:11:41 -0400
  • 2a8c88496c trying to fix yaml James McClure 2022-08-05 21:20:19 -0400
  • 58ae63fe87 fix bug in ion model restart James McClure 2022-08-02 15:36:35 -0400
  • 777e216b35 restart for Poisson model James McClure 2022-07-29 18:11:32 -0400
  • 3cc12ac36e Fixing memory leaks Mark Berrill 2022-07-13 11:20:53 -0400
  • ed8f5684fd Fixing memory leak Mark Berrill 2022-07-13 10:53:19 -0400
  • c148f907eb fix zlib download path James McClure 2022-07-13 07:55:37 -0400
  • 5204f48d45 fix memory leaks James McClure 2022-07-12 18:44:36 -0400
  • b7910dbefe fix compiler warnings James McClure 2022-07-06 21:33:59 -0400
  • 5a37f7865f add BC to poisson solver James McClure 2022-07-06 19:35:08 -0400
  • a9ed4a3b97 fix bug with SWC James McClure 2022-07-04 19:46:14 -0400
  • 1c903a3380 add performance counters to ion / poisson solvers James McClure 2022-06-11 20:49:01 -0400
  • be8f508b64 add input files for simple bacteria James McClure 2022-05-26 16:43:34 -0400
  • dc78491a9c add offset to Domain for swc James McClure 2022-05-25 17:59:08 -0400
  • df27167212 SWC reader update 2 James McClure 2022-05-25 16:28:58 -0400
  • 57fc4cc8e1 SWC reader update James McClure 2022-05-25 16:21:34 -0400
  • e818ade293 shift swc data James McClure 2022-05-16 21:43:53 -0400
  • 175e7bd00b swc reader works with MPI James McClure 2022-05-16 11:22:38 -0400
  • c4a97c0589 support for SWC input format James McClure 2022-05-16 11:17:47 -0400
  • 0e65364954 added support for swc file James McClure 2022-05-15 23:00:23 -0400
  • 2acaa335aa added membrane analysis capability James McClure 2022-05-13 20:44:33 -0400
  • b6227dd823 multiple nvidia gpu working with membrane James E McClure 2022-05-12 20:50:05 -0400
  • cf3bc417ce Merge branch 'test_poisson' of github.com:JamesEMcClure/LBPM-WIA into test_poisson James McClure 2022-05-12 07:09:39 -0400
  • ffe4bdd917 update hip James McClure 2022-05-12 06:58:10 -0400
  • 0e769186a5 update gpu routines first try James McClure 2022-05-12 06:54:55 -0400
  • cb995c7d00 add sample files for plane membrane Zhe Rex Li 2022-05-12 15:39:50 +1000
  • ad8c5f6e26 communication seems to work James McClure 2022-05-12 00:52:34 -0400
  • 29e4c76561 membrane test works with new comm James McClure 2022-05-12 00:31:22 -0400
  • 7c790e8802 updating membrane communication structure James McClure 2022-05-11 23:37:18 -0400
  • 2894b740d0 add functions to copy send / recv list from ScaLBL James McClure 2022-05-11 17:12:23 -0400
  • 4661cbdce4 debug gpu James McClure 2022-05-11 14:05:16 -0400
  • 50c7429995 debug gpu launch issue for ion James McClure 2022-05-11 10:32:53 -0400
  • e677b0395f add barrier to membrane transport James McClure 2022-05-09 06:32:58 -0400
  • 9e74f49812 add new ion code for cuda James McClure 2022-05-08 05:49:23 -0400
  • cf2b69e7ee fix missing bracket James McClure 2022-05-07 19:36:14 -0400
  • 6f7740fc3e Merge branch 'tmp' into test_poisson James McClure 2022-05-07 19:32:54 -0400
  • 9037f51c22 add hip for ion update James McClure 2022-05-07 19:32:51 -0400
  • 459d6064c1 merge to membrane James McClure 2022-05-06 20:41:03 -0400
  • 9f76e7b1e8 update to cell vis routine James McClure 2022-05-06 19:03:19 -0400
  • c424e1d984 cleanup with help from valgrind James McClure 2022-05-06 16:21:37 -0400
  • ba6d438630 this makes mpi hang error explicit;to be debugged Zhe Li 2022-05-04 14:34:31 +1000
  • 01ffcce379 update print-out Zhe Rex Li 2022-05-03 17:10:26 +1000
  • de52cf53b9 add more tweaks for cell simulator Zhe Rex Li 2022-05-03 16:32:42 +1000
  • 9c2c216af8 udpate output precision Zhe Li 2022-05-03 15:55:40 +1000
  • 6959a02f7b correct ion LB collison Zhe Rex Li 2022-05-03 15:00:00 +1000
  • 47db000ba6 correct D3Q7 Poisson LB algorithm Zhe Rex Li 2022-04-29 20:36:38 +1000
  • 025987e53b make further corrections Zhe Li 2022-04-28 23:59:13 +1000
  • bdd0efd36e build passed Zhe Li 2022-04-28 16:55:58 +1000
  • a00a3606f7 add functionality for user to choose either D3Q7 or D3Q19 lattice for Poisson;to be built and tested Zhe Rex Li 2022-04-28 16:21:04 +1000
  • 678925ec15 correct use_membrane functionality Zhe Li 2022-04-28 15:22:23 +1000
  • 754b1ad9d9 update executable list and NP_cell simulator Zhe Li 2022-04-27 14:04:11 +1000