Merge pull request #3221 from atgeirr/release/2022.10

Bump version for final release candidate

CMakeLists.txt

@@ -9,7 +9,7 @@ option(ENABLE_ECL_INPUT "Enable eclipse input support?" ON)
 option(ENABLE_ECL_OUTPUT "Enable eclipse output support?" ON)
 option(ENABLE_MOCKSIM "Build the mock simulator for io testing" ON)
 option(OPM_ENABLE_PYTHON "Enable python bindings?" OFF)
-option(OPM_INSTALL_PYTHON "Enable python bindings?" OFF)
+option(OPM_INSTALL_PYTHON "Install python bindings?" ON)
 option(OPM_ENABLE_EMBEDDED_PYTHON "Enable embedded python?" OFF)
 
 # Output implies input
@@ -32,13 +32,13 @@ set(OPM_PROJECT_EXTRA_CODE_INSTALLED  "#ENABLE_ECL_INPUT is needed by opm-common
                                        set(ENABLE_ECL_INPUT ${ENABLE_ECL_INPUT})
                                        set(OPM_MACROS_ROOT ${CMAKE_INSTALL_PREFIX}/share/opm)
                                        list(APPEND CMAKE_MODULE_PATH \${OPM_MACROS_ROOT}/cmake/Modules)
-                                       include(OpmPackage) #Make macros availabe after find_package(opm-common)")
+                                       include(OpmPackage) #Make macros available after find_package(opm-common)")
 
 set(OPM_PROJECT_EXTRA_CODE_INTREE "#ENABLE_ECL_INPUT is needed by opm-common-prereq.cmake
                                    set(ENABLE_ECL_INPUT ${ENABLE_ECL_INPUT})
                                    set(OPM_MACROS_ROOT ${OPM_MACROS_ROOT})
                                    list(APPEND CMAKE_MODULE_PATH \${OPM_MACROS_ROOT}/cmake/Modules)
-                                   include(OpmPackage) #Make macros availabe after find_package(opm-common)")
+                                   include(OpmPackage) #Make macros available after find_package(opm-common)")
 if(ENABLE_ECL_OUTPUT)
   set(OPM_PROJECT_EXTRA_CODE_INSTALLED "${OPM_PROJECT_EXTRA_CODE_INSTALLED}
                                         set(COMPARE_ECL_COMMAND ${CMAKE_INSTALL_PREFIX}/bin${${name}_VER_DIR}/compareECL)
@@ -80,6 +80,13 @@ if(ENABLE_ECL_INPUT)
   endif()
 endif()
 
+if(OPM_ENABLE_EMBEDDED_PYTHON AND NOT OPM_ENABLE_PYTHON)
+  # This needs to be here to run before source_hook
+  message(WARNING "Inconsistent settings: OPM_ENABLE_PYTHON=OFF and "
+    "OPM_ENABLE_EMBEDDED_PYTHON=ON. Please use OPM_ENABLE_PYTHON=ON to "
+    "activate. Will disable embedded python in this run.")
+  set(OPM_ENABLE_EMBEDDED_PYTHON OFF CACHE BOOL "Enable embedded python?" FORCE)
+endif()
 # read the list of components from this file (in the project directory);
 # it should set various lists with the names of the files to include
 include (CMakeLists_files.cmake)
@@ -129,12 +136,13 @@ macro (sources_hook)
     list(INSERT opm-common_SOURCES 0 ${PROJECT_BINARY_DIR}/ParserInit.cpp)
     foreach (name A B C D E F G H I J K L M N O P Q R S T U V W X Y Z)
         list(INSERT opm-common_SOURCES 0 ${PROJECT_BINARY_DIR}/ParserKeywords/${name}.cpp)
+        list(INSERT opm-common_HEADERS 0 ${PROJECT_BINARY_DIR}/include/opm/input/eclipse/Parser/ParserKeywords/${name}.hpp)
     endforeach()
-    if (OPM_ENABLE_PYTHON)
+    if (OPM_ENABLE_EMBEDDED_PYTHON)
       list(INSERT opm-common_SOURCES 0 ${PROJECT_BINARY_DIR}/python/cxx/builtin_pybind11.cpp)
     endif()
   endif()
-  set_source_files_properties(src/opm/parser/eclipse/Python/Python.cpp
+  set_source_files_properties(src/opm/input/eclipse/Python/Python.cpp
                               PROPERTIES COMPILE_FLAGS -Wno-shadow)
 endmacro (sources_hook)
 
@@ -156,6 +164,14 @@ macro (install_hook)
           PATTERN *.hpp)
 endmacro (install_hook)
 
+# Used to append entries from one list to another.
+# The output list is suitable for use in setup.py subtitution
+macro(append_quoted OUT IN)
+  foreach(ENTRY ${${IN}})
+    list(APPEND ${OUT} "'${ARGN}${ENTRY}'")
+  endforeach()
+endmacro()
+
 # If opm-common is configured to embed the python interpreter we must make sure
 # that all downstream modules link libpython transitively. Due to the required
 # integration with Python+cmake machinery provided by pybind11 this is done by
@@ -177,6 +193,8 @@ if (OPM_ENABLE_PYTHON)
     endif()
     set(Python3_EXECUTABLE ${PYTHON_EXECUTABLE})
     set(Python3_LIBRARIES ${PYTHON_LIBRARIES})
+    set(Python3_VERSION "${PYTHON_VERSION_STRING}")
+    set(Python3_VERSION_MINOR ${PYTHON_VERSION_MINOR})
   else()
     # Be backwards compatible.
     if(PYTHON_EXECUTABLE AND NOT Python3_EXECUTABLE)
@@ -192,9 +210,32 @@ if (OPM_ENABLE_PYTHON)
     else()
       find_package(Python3 REQUIRED COMPONENTS Interpreter)
     endif()
+    # Make sure we fail gracefully here without setuptool
+    execute_process(COMMAND ${Python3_EXECUTABLE} -c "import setuptools"
+      WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
+      ERROR_VARIABLE SETUPTOOL_ERROR OUTPUT_VARIABLE SETUPTOOL_OUT
+      RESULT_VARIABLE SETUPTOOL_RESULT)
+    if(SETUPTOOL_RESULT GREATER 0)
+      message(WARNING "Trying to test setuptools resulted in error message: ${SETUPTOOL_ERROR}")
+      message(SEND_ERROR "To build the python bindings you need to install setuptool. "
+        "Either use \"apt-get install python3-setuptools\" (on Debian/Ubuntu) "
+        "or \"pip install setuptools\"")
+    endif()
+    if(Python3_VERSION_MINOR LESS 3)
+      # Python native namespace packages requires python >= 3.3
+      message(SEND_ERROR "OPM requires python >= 3.3 but only version ${Python3_VERSION} was found")
+    endif()
+
     # Compatibility settings for PythonInterp and PythonLibs
     # used e.g. in FindCwrap, pybind11
     set(PYTHON_EXECUTABLE ${Python3_EXECUTABLE})
+    # Directory to install common (for opm modules) python scripts
+    include (GNUInstallDirs)
+    set(OPM_PYTHON_COMMON_DIR "${CMAKE_INSTALL_DATAROOTDIR}/opm/python")
+    set(OPM_PROJECT_EXTRA_CODE_INTREE "${OPM_PROJECT_EXTRA_CODE_INTREE}
+                                       set(opm-common_PYTHON_COMMON_DIR ${PROJECT_SOURCE_DIR}/python)")
+    set(OPM_PROJECT_EXTRA_CODE_INSTALLED "${OPM_PROJECT_EXTRA_CODE_INSTALLED}
+                                         set(opm-common_PYTHON_COMMON_DIR ${CMAKE_INSTALL_PREFIX}/${OPM_PYTHON_COMMON_DIR})")
   endif()
   # We always need the PYTHON_INCLUDE_DIR. Unfortunately
   # When we build pypi packages CMake will fail to determine
@@ -243,10 +284,6 @@ if (ENABLE_MOCKSIM)
   endif()
 endif()
 
-if (ENABLE_SCHEDULE_DEBUG)
-  add_compile_definitions( SCHEDULE_DEBUG )
-endif()
-
 # Build the compare utilities
 if(ENABLE_ECL_INPUT)
   add_executable(compareECL
@@ -263,11 +300,15 @@ if(ENABLE_ECL_INPUT)
     test_util/summary.cpp
     )
 
+  add_executable(arraylist
+    test_util/arraylist.cpp
+    )
+
   add_executable(rewriteEclFile
     test_util/rewriteEclFile.cpp
     )
 
-  foreach(target compareECL convertECL summary rewriteEclFile)
+  foreach(target compareECL convertECL summary rewriteEclFile arraylist)
     target_link_libraries(${target} opmcommon)
     install(TARGETS ${target} DESTINATION bin)
   endforeach()
@@ -301,11 +342,6 @@ if(ENABLE_ECL_INPUT)
       ${PROJECT_BINARY_DIR}/tests
     )
 
-  foreach(test test_EclIO test_EGrid test_ERft test_ERst test_ESmry test_EInit test_ExtESmry)
-    opm_add_test(${test} CONDITION ENABLE_ECL_INPUT AND Boost_UNIT_TEST_FRAMEWORK_FOUND
-                         LIBRARIES ${_libs}
-                         WORKING_DIRECTORY ${PROJECT_BINARY_DIR}/tests)
-  endforeach()
 endif()
 
 # Install build system files and documentation
@@ -320,25 +356,7 @@ install(FILES cmake/OPM-CMake.md
 install(FILES etc/opm_bash_completion.sh.in DESTINATION share/opm/etc)
 
 if (OPM_ENABLE_PYTHON)
-  # -------------------------------------------------------------------------
-  # 1: Wrap C++ functionality in Python
-  if (EXISTS "/etc/debian_version")
-    set(PYTHON_PACKAGE_PATH "dist-packages")
-  else()
-    set(PYTHON_PACKAGE_PATH "site-packages")
-  endif()
-  if(PYTHON_VERSION_MAJOR)
-    set(PY_MAJOR ${PYTHON_VERSION_MAJOR})
-  else()
-    set(PY_MAJOR ${Python3_VERSION_MAJOR})
-  endif()
-  if(PYTHON_VERSION_MINOR)
-    set(PY_MINOR ${PYTHON_VERSION_MINOR})
-  else()
-    set(PY_MINOR ${Python3_VERSION_MINOR})
-  endif()
-  set(PYTHON_INSTALL_PREFIX "lib/python${PY_MAJOR}.${PY_MINOR}/${PYTHON_PACKAGE_PATH}" CACHE STRING "Subdirectory to install Python modules in")
-
+  include(PyInstallPrefix)
   make_directory(${PROJECT_BINARY_DIR}/python)
   get_target_property(_opmcommon_include_dirs opmcommon INCLUDE_DIRECTORIES)
   list(APPEND _opmcommon_include_dirs ${_ecl_include_dirs})
@@ -361,7 +379,12 @@ if (OPM_ENABLE_PYTHON)
     endif()
 
     if (BUILD_SHARED_LIBS)
-      list(APPEND _python_rpath_list "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}")
+      if (OPM_INSTALL_PYTHON)
+        list(APPEND _python_rpath_list "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}")
+        list(APPEND _python_rpath_list "${PROJECT_BINARY_DIR}/lib")
+      else()
+        list(APPEND _python_rpath_list "${PROJECT_BINARY_DIR}/lib")
+      endif()
     endif()
 
     if (_python_rpath_list)
@@ -375,24 +398,38 @@ if (OPM_ENABLE_PYTHON)
   endif()
 
   set(opm-common_PYTHON_PACKAGE_VERSION ${OPM_PYTHON_PACKAGE_VERSION_TAG})
+  set(SETUP_PY_FLAGS "'-std=c++17'")
 
   # Generate versioned setup.py
   if (pybind11_INCLUDE_DIRS)
-    string(REGEX REPLACE ";" "', '"  _tmp "${pybind11_INCLUDE_DIRS}")
-    set(SETUP_PY_PYBIND_INCLUDE_DIR "'${_tmp}'")
+    append_quoted(SETUP_PY_INCLUDE_DIRS pybind11_INCLUDE_DIRS)
   endif()
 
   if (TARGET fmt::fmt)
      get_target_property(SETUP_PY_FMT_LIBS fmt::fmt LOCATION)
      get_target_property(FMT_FLAGS fmt::fmt INTERFACE_COMPILE_DEFINITIONS)
-     foreach(flag ${FMT_FLAGS})
-       set(SETUP_PY_FMT_FLAGS "${SETUP_PY_FMT_FLAGS} '-D${flag}',")
-     endforeach()
-     list(APPEND opm-common_PYTHON_LINKAGE "'${SETUP_PY_FMT_LIBS}'")
+     append_quoted(SETUP_PY_FLAGS FMT_FLAGS "-D")
+     append_quoted(opm-common_PYTHON_LINKAGE SETUP_PY_FMT_LIBS)
   else()
-    set(SETUP_PY_FMT_FLAGS "'-DFMT_HEADER_ONLY'")
+    list(APPEND SETUP_PY_FLAGS "'-DFMT_HEADER_ONLY'")
   endif()
 
+  if(cjson_FOUND)
+    append_quoted(opm-common_PYTHON_LINKAGE cjson_LIBRARIES)
+    append_quoted(SETUP_PY_INCLUDE_DIRS cjson_INCLUDE_DIRS)
+  endif()
+
+  if(OpenMP_FOUND)
+    append_quoted(opm-common_PYTHON_LINKAGE OpenMP_CXX_LIBRARIES)
+    append_quoted(SETUP_PY_FLAGS OpenMP_CXX_FLAGS)
+    append_quoted(SETUP_PY_INCLUDE_DIRS OpenMP_CXX_INCLUDE_DIRS)
+  endif()
+
+  # Items need to be comma separated for setup.py generation
+  string(REPLACE ";" "," SETUP_PY_LINKAGE "${opm-common_PYTHON_LINKAGE}")
+  string(REPLACE ";" "," SETUP_PY_FLAGS "${SETUP_PY_FLAGS}")
+  string(REPLACE ";" "," SETUP_PY_INCLUDE_DIRS "${SETUP_PY_INCLUDE_DIRS}")
+
   configure_file (${PROJECT_SOURCE_DIR}/python/setup.py.in ${PROJECT_BINARY_DIR}/python/setup.py)
   file(COPY ${PROJECT_SOURCE_DIR}/python/README.md DESTINATION ${PROJECT_BINARY_DIR}/python)
   execute_process(COMMAND ${Python3_EXECUTABLE} target_name.py
@@ -430,6 +467,9 @@ if (OPM_ENABLE_PYTHON)
   # setup-install.sh - and completely bypass cmake in the installation phase.
   if (OPM_INSTALL_PYTHON)
     install( CODE "execute_process(COMMAND ${Python3_EXECUTABLE} ${PROJECT_BINARY_DIR}/python/install.py ${PROJECT_BINARY_DIR}/python/opm ${DEST_PREFIX}${CMAKE_INSTALL_PREFIX}/${PYTHON_INSTALL_PREFIX} 1)")
+    ## Need to install this Python script such that it can be used by opm-simulators when building against an installed
+    ##  opm-common
+    install( PROGRAMS "python/install.py" DESTINATION "${OPM_PYTHON_COMMON_DIR}" )
   endif()
 
   # Observe that if the opmcommon library has been built as a shared library the
@@ -475,11 +515,6 @@ if (OPM_ENABLE_PYTHON)
     target_link_libraries(opmcommon PUBLIC ${PYTHON_LIBRARY})
     add_definitions(-DEMBEDDED_PYTHON)
   endif()
-else()
-  if (OPM_ENABLE_EMBEDDED_PYTHON)
-    message(WARNING "Inconsistent settings OPM_ENABLE_PYTHON / OPM_ENABLE_EMBEDDED_PYTHON")
-    set(OPM_ENABLE_EMBEDDED_PYTHON OFF CACHE BOOL "Enable embedded python?" FORCE)
-  endif()
 endif()
 
 install(DIRECTORY docs/man1 DESTINATION ${CMAKE_INSTALL_MANDIR}

CopyHeaders.cmake

@@ -13,17 +13,17 @@ if (EXISTS ${BASE_DIR}/python/cxx)
 endif()
 
 execute_process(COMMAND ${CMAKE_COMMAND} -E copy_if_different
-                        ${BASE_DIR}/tmp_gen/include/opm/parser/eclipse/Parser/ParserKeywords/Builtin.hpp
-                        ${BASE_DIR}/include/opm/parser/eclipse/Parser/ParserKeywords/Builtin.hpp)
+                        ${BASE_DIR}/tmp_gen/include/opm/input/eclipse/Parser/ParserKeywords/Builtin.hpp
+                        ${BASE_DIR}/include/opm/input/eclipse/Parser/ParserKeywords/Builtin.hpp)
 
 
-file(GLOB HDRS ${BASE_DIR}/tmp_gen/include/opm/parser/eclipse/Parser/ParserKeywords/*.hpp)
+file(GLOB HDRS ${BASE_DIR}/tmp_gen/include/opm/input/eclipse/Parser/ParserKeywords/*.hpp)
 
 foreach(HDR ${HDRS})
-  file(RELATIVE_PATH hdr ${BASE_DIR}/tmp_gen/include/opm/parser/eclipse/Parser/ParserKeywords ${HDR})
+  file(RELATIVE_PATH hdr ${BASE_DIR}/tmp_gen/include/opm/input/eclipse/Parser/ParserKeywords ${HDR})
   execute_process(COMMAND ${CMAKE_COMMAND} -E copy_if_different
                           ${HDR}
-                          ${BASE_DIR}/include/opm/parser/eclipse/Parser/ParserKeywords/${hdr})
+                          ${BASE_DIR}/include/opm/input/eclipse/Parser/ParserKeywords/${hdr})
 
 endforeach()
 

ExtraTests.cmake

@@ -59,21 +59,20 @@ foreach (test BoxTest
   list(APPEND EXTRA_TESTS ${test})
 endforeach ()
 
-opm_add_test( rst_spe1
-              SOURCES tests/rst_test.cpp
-              LIBRARIES ${TEST_LIBS}
-              TEST_ARGS tests/SPE1CASE2.DATA tests/SPE1CASE2_RESTART.DATA )
-
-opm_add_test( rst_msw
-              SOURCES tests/rst_test.cpp
-              LIBRARIES ${TEST_LIBS}
-              TEST_ARGS tests/MSW.DATA tests/MSW_RESTART.DATA )
-
 add_test( NAME rst_deck_test
           COMMAND ${PROJECT_SOURCE_DIR}/tests/rst_test_driver.sh ${PROJECT_BINARY_DIR}/bin/rst_deck ${PROJECT_BINARY_DIR}/bin/opmhash
           ${PROJECT_SOURCE_DIR}/tests/SPE1CASE2_INCLUDE.DATA)
 
 
+add_test( NAME rst_deck_test2
+          COMMAND ${PROJECT_SOURCE_DIR}/tests/rst_test_driver2.sh
+                  ${PROJECT_BINARY_DIR}/bin/rst_deck
+                  ${PROJECT_BINARY_DIR}/bin/opmi
+                  ${PROJECT_SOURCE_DIR}/tests/ACTIONX_M1.DATA
+                  ${PROJECT_SOURCE_DIR}/tests/ACTIONX_M1_MULTIPLE.DATA
+                  ${PROJECT_SOURCE_DIR}/tests/ACTIONX_M1.UNRST
+                  ${PROJECT_SOURCE_DIR}/tests/ACTIONX_M1.X0010 )
+
 # opm-tests dependent tests
 if(HAVE_OPM_TESTS)
   opm_add_test(parse_write ONLY_COMPILE
@@ -94,10 +93,7 @@ if(HAVE_OPM_TESTS)
                 ${OPM_TESTS_ROOT}/spe9/SPE9_CP.DATA
                 ${OPM_TESTS_ROOT}/spe9/SPE9_CP_GROUP.DATA
                 ${OPM_TESTS_ROOT}/spe9/SPE9_CP_SHORT.DATA
-                ${OPM_TESTS_ROOT}/spe9/SPE9_CP_SHORT_RESTART.DATA
                 ${OPM_TESTS_ROOT}/spe9/SPE9.DATA
-                ${OPM_TESTS_ROOT}/spe10model1/SPE10_MODEL1.DATA
-                ${OPM_TESTS_ROOT}/spe10model2/SPE10_MODEL2.DATA
                 ${OPM_TESTS_ROOT}/msw_2d_h/2D_H__.DATA
                 ${OPM_TESTS_ROOT}/model2/0_BASE_MODEL2.DATA
                 ${OPM_TESTS_ROOT}/model2/1_MULTREGT_MODEL2.DATA
@@ -120,7 +116,7 @@ if(HAVE_OPM_TESTS)
                PROPERTY ENVIRONMENT "OPM_ERRORS_IGNORE=PARSE_RANDOM_SLASH")
 
   add_test( NAME rst_deck_test_norne
-             COMMAND ${PROJECT_SOURCE_DIR}/tests/rst_test_driver.sh ${CMAKE_BINARY_DIR}/bin/rst_deck ${CMAKE_BINARY_DIR}/bin/opmhash
+             COMMAND ${PROJECT_SOURCE_DIR}/tests/rst_test_driver.sh ${PROJECT_BINARY_DIR}/bin/rst_deck ${PROJECT_BINARY_DIR}/bin/opmhash
              ${OPM_TESTS_ROOT}/norne/NORNE_ATW2013.DATA)
 
   set_property(TEST rst_deck_test_norne

GenerateKeywords.cmake

@@ -1,27 +1,30 @@
 set(genkw_SOURCES src/opm/json/JsonObject.cpp
-                  src/opm/parser/eclipse/Parser/createDefaultKeywordList.cpp
-                  src/opm/parser/eclipse/Deck/UDAValue.cpp
-                  src/opm/parser/eclipse/Deck/DeckTree.cpp
-                  src/opm/parser/eclipse/Deck/DeckValue.cpp
-                  src/opm/parser/eclipse/Deck/Deck.cpp
-                  src/opm/parser/eclipse/Deck/DeckItem.cpp
-                  src/opm/parser/eclipse/Deck/DeckKeyword.cpp
-                  src/opm/parser/eclipse/Deck/DeckRecord.cpp
-                  src/opm/parser/eclipse/Deck/DeckOutput.cpp
-                  src/opm/parser/eclipse/Generator/KeywordGenerator.cpp
-                  src/opm/parser/eclipse/Generator/KeywordLoader.cpp
-                  src/opm/parser/eclipse/Parser/ErrorGuard.cpp
-                  src/opm/parser/eclipse/Parser/ParseContext.cpp
-                  src/opm/parser/eclipse/Parser/ParserEnums.cpp
-                  src/opm/parser/eclipse/Parser/ParserItem.cpp
-                  src/opm/parser/eclipse/Parser/ParserKeyword.cpp
-                  src/opm/parser/eclipse/Parser/ParserRecord.cpp
-                  src/opm/parser/eclipse/Parser/raw/RawKeyword.cpp
-                  src/opm/parser/eclipse/Parser/raw/RawRecord.cpp
-                  src/opm/parser/eclipse/Parser/raw/StarToken.cpp
-                  src/opm/parser/eclipse/Units/Dimension.cpp
-                  src/opm/parser/eclipse/Units/UnitSystem.cpp
+                  src/opm/input/eclipse/Parser/createDefaultKeywordList.cpp
+                  src/opm/input/eclipse/Deck/UDAValue.cpp
+                  src/opm/input/eclipse/Deck/DeckTree.cpp
+                  src/opm/input/eclipse/Deck/DeckValue.cpp
+                  src/opm/input/eclipse/Deck/Deck.cpp
+                  src/opm/input/eclipse/Deck/DeckView.cpp
+                  src/opm/input/eclipse/Deck/DeckItem.cpp
+                  src/opm/input/eclipse/Deck/DeckKeyword.cpp
+                  src/opm/input/eclipse/Deck/DeckRecord.cpp
+                  src/opm/input/eclipse/Deck/DeckOutput.cpp
+                  src/opm/input/eclipse/Generator/KeywordGenerator.cpp
+                  src/opm/input/eclipse/Generator/KeywordLoader.cpp
+                  src/opm/input/eclipse/Schedule/UDQ/UDQEnums.cpp
+                  src/opm/input/eclipse/Parser/ErrorGuard.cpp
+                  src/opm/input/eclipse/Parser/ParseContext.cpp
+                  src/opm/input/eclipse/Parser/ParserEnums.cpp
+                  src/opm/input/eclipse/Parser/ParserItem.cpp
+                  src/opm/input/eclipse/Parser/ParserKeyword.cpp
+                  src/opm/input/eclipse/Parser/ParserRecord.cpp
+                  src/opm/input/eclipse/Parser/raw/RawKeyword.cpp
+                  src/opm/input/eclipse/Parser/raw/RawRecord.cpp
+                  src/opm/input/eclipse/Parser/raw/StarToken.cpp
+                  src/opm/input/eclipse/Units/Dimension.cpp
+                  src/opm/input/eclipse/Units/UnitSystem.cpp
                   src/opm/common/utility/OpmInputError.cpp
+                  src/opm/common/utility/shmatch.cpp
                   src/opm/common/OpmLog/OpmLog.cpp
                   src/opm/common/OpmLog/Logger.cpp
                   src/opm/common/OpmLog/StreamLog.cpp
@@ -36,9 +39,9 @@ add_executable(genkw ${genkw_SOURCES})
 target_link_libraries(genkw ${opm-common_LIBRARIES})
 
 # Generate keyword list
-include(src/opm/parser/eclipse/share/keywords/keyword_list.cmake)
-string(REGEX REPLACE "([^;]+)" "${PROJECT_SOURCE_DIR}/src/opm/parser/eclipse/share/keywords/\\1" keyword_files "${keywords}")
-configure_file(src/opm/parser/eclipse/keyword_list.argv.in keyword_list.argv)
+include(src/opm/input/eclipse/share/keywords/keyword_list.cmake)
+string(REGEX REPLACE "([^;]+)" "${PROJECT_SOURCE_DIR}/src/opm/input/eclipse/share/keywords/\\1" keyword_files "${keywords}")
+configure_file(src/opm/input/eclipse/keyword_list.argv.in keyword_list.argv)
 
 # Generate keyword source
 
@@ -46,70 +49,23 @@ set( genkw_argv keyword_list.argv
   ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords
   ${PROJECT_BINARY_DIR}/tmp_gen/ParserInit.cpp
   ${PROJECT_BINARY_DIR}/tmp_gen/include/
-  opm/parser/eclipse/Parser/ParserKeywords
+  opm/input/eclipse/Parser/ParserKeywords
   ${PROJECT_BINARY_DIR}/tmp_gen/TestKeywords.cpp)
 
-set( _tmp_output
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/A.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/B.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/C.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/D.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/E.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/F.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/G.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/H.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/I.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/J.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/K.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/L.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/M.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/N.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/O.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/P.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/Q.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/R.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/S.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/T.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/U.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/V.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/W.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/X.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/Y.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/Z.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/ParserInit.cpp
-  ${PROJECT_BINARY_DIR}/tmp_gen/TestKeywords.cpp)
+foreach (name A B C D E F G H I J K L M N O P Q R S T U V W X Y Z)
+  list(APPEND _tmp_output ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/${name}.cpp
+                          ${PROJECT_BINARY_DIR}/tmp_gen/include/opm/input/eclipse/Parser/ParserKeywords/${name}.hpp)
+  list(APPEND _target_output ${PROJECT_BINARY_DIR}/ParserKeywords/${name}.cpp
+                             ${PROJECT_BINARY_DIR}/include/opm/input/eclipse/Parser/ParserKeywords/${name}.hpp)
+endforeach()
 
+foreach(name TestKeywords.cpp ParserInit.cpp)
+  list(APPEND _target_output ${PROJECT_BINARY_DIR}/${name})
+  list(APPEND _tmp_output ${PROJECT_BINARY_DIR}/tmp_gen/${name})
+endforeach()
 
-set( _target_output
-  ${PROJECT_BINARY_DIR}/ParserKeywords/A.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/B.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/C.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/D.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/E.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/F.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/G.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/H.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/I.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/J.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/K.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/L.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/M.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/N.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/O.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/P.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/Q.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/R.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/S.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/T.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/U.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/V.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/W.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/X.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/Y.cpp
-  ${PROJECT_BINARY_DIR}/ParserKeywords/Z.cpp
-  ${PROJECT_BINARY_DIR}/TestKeywords.cpp
-  ${PROJECT_BINARY_DIR}/ParserInit.cpp)
-
+list(APPEND _target_output ${PROJECT_BINARY_DIR}/include/opm/input/eclipse/Parser/ParserKeywords/Builtin.hpp)
+list(APPEND _tmp_output ${PROJECT_BINARY_DIR}/tmp_gen/include/opm/input/eclipse/Parser/ParserKeywords/Builtin.hpp)
 
 if (OPM_ENABLE_PYTHON)
   list(APPEND genkw_argv ${PROJECT_BINARY_DIR}/tmp_gen/builtin_pybind11.cpp)
@@ -117,15 +73,13 @@ if (OPM_ENABLE_PYTHON)
   list(APPEND _target_output ${PROJECT_BINARY_DIR}/python/cxx/builtin_pybind11.cpp)
 endif()
 
-
-
 add_custom_command( OUTPUT
   ${_tmp_output}
   COMMAND genkw ${genkw_argv}
-  DEPENDS genkw ${keyword_files} src/opm/parser/eclipse/share/keywords/keyword_list.cmake)
+  DEPENDS genkw ${keyword_files} src/opm/input/eclipse/share/keywords/keyword_list.cmake)
 
 # To avoid some rebuilds
 add_custom_command(OUTPUT
   ${_target_output}
-  DEPENDS ${PROJECT_BINARY_DIR}/tmp_gen/ParserKeywords/A.cpp
+  DEPENDS ${_tmp_output}
   COMMAND ${CMAKE_COMMAND} -DBASE_DIR=${PROJECT_BINARY_DIR} -P ${PROJECT_SOURCE_DIR}/CopyHeaders.cmake)

README.md

@@ -1,3 +1,23 @@
-# opm-common
-Contains common components used throughout all of OPM,
-in particular CMake modules for the build system.
+# opm-common: Tools for Eclipse reservoir simulation files
+
+The Open Porous Media (OPM) software suite provides libraries and
+tools for modeling and simulation of porous media processes,
+especially  for simulating CO2 sequestration and improved and enhanced
+oil recovery. The Eclipse file format is widely used in the reservoir
+simulation  community. This package provides a library containing code
+for processing files in Eclipse format, Python binding for accessing
+Eclipse files and  utility code used by other OPM modules (e.g. CMake
+modules used).
+
+License
+-------
+
+The library is distributed under the GNU General Public License,
+version 3 or later (GPLv3+).
+
+Requirements
+-----------
+
+- C++17 compatible compiler
+- CMake >= 3.10
+- Posix compatibility

cmake/Modules/FindGMP.cmake

@@ -0,0 +1,31 @@
+# - Find the GNU Multiprecision library.
+#
+# Will define the following imported target for usage:
+# - GMP::gmp Target for linking/compiling with C library
+# - GMP::gmpxx Target for linking/compiling with C++ library
+find_path(GMP_INCLUDE_DIR gmp.h)
+find_library(GMP_LIBRARY gmp)
+find_path(GMPXX_INCLUDE_DIR gmpxx.h)
+find_library(GMPXX_LIBRARY gmpxx)
+
+include(FindPackageHandleStandardArgs)
+find_package_handle_standard_args(GMP
+  DEFAULT_MSG
+  GMPXX_LIBRARY GMPXX_INCLUDE_DIR GMP_INCLUDE_DIR GMP_LIBRARY)
+
+if(GMP_FOUND)
+  if(NOT TARGET GMP::gmp)
+    add_library(GMP::gmp UNKNOWN IMPORTED GLOBAL)
+    set_target_properties(GMP::gmp PROPERTIES
+      IMPORTED_LOCATION ${GMP_LIBRARY}
+      INTERFACE_INCLUDE_DIRECTORIES ${GMP_INCLUDE_DIR})
+  endif()
+
+  if(NOT TARGET GMP::gmpxx)
+    add_library(GMP::gmpxx UNKNOWN IMPORTED GLOBAL)
+    set_target_properties(GMP::gmpxx PROPERTIES
+      IMPORTED_LOCATION ${GMPXX_LIBRARY}
+      INTERFACE_INCLUDE_DIRECTORIES ${GMPXX_INCLUDE_DIR}
+      TARGET_LINK_LIBRARIES GMP::gmp)
+  endif()
+endif()

cmake/Modules/FindMETIS.cmake

@@ -55,11 +55,13 @@ if (METIS_INCLUDE_DIRS OR METIS_LIBRARIES)
     endif()
   endif()
 
-  add_library(METIS::METIS UNKNOWN IMPORTED)
-  set_target_properties(METIS::METIS PROPERTIES
-    IMPORTED_LOCATION ${METIS_LIBRARIES}
-    INTERFACE_INCLUDE_DIRECTORIES ${METIS_INCLUDE_DIRS}
-    INTERFACE_COMPILE_DEFINITIONS METIS_API_VERSION=${METIS_API_VERSION})
+  if (NOT TARGET METIS::METIS)
+    add_library(METIS::METIS UNKNOWN IMPORTED)
+    set_target_properties(METIS::METIS PROPERTIES
+      IMPORTED_LOCATION ${METIS_LIBRARIES}
+      INTERFACE_INCLUDE_DIRECTORIES ${METIS_INCLUDE_DIRS}
+      INTERFACE_COMPILE_DEFINITIONS METIS_API_VERSION=${METIS_API_VERSION})
+  endif()
 endif()
 
 # print a message to indicate status of this package

cmake/Modules/FindPTScotch.cmake

@@ -70,6 +70,20 @@ if(PTSCOTCH_FOUND)
   set(PTSCOCH_LINK_FLAGS "${DUNE_MPI_LINK_FLAGS}"
     CACHE STRING "PT-Scotch link flags")
   set(HAVE_PTSCOTCH 1)
+  if(NOT TARGET PTScotch::Scotch)
+    add_library(PTScotch::Scotch UNKNOWN IMPORTED GLOBAL)
+    set_target_properties(PTScotch::Scotch PROPERTIES
+      IMPORTED_LOCATION "${SCOTCH_LIBRARY}"
+      INCLUDE_DIRECTORIES "${PTSCOTCH_INCLUDE_DIRS}"
+      INTERFACE_LINK_LIBRARIES "${PTSCOTCHERR_LIBRARY}")
+  endif()
+  if(NOT TARGET PTScotch::PTScotch)
+    add_library(PTScotch::PTScotch UNKNOWN IMPORTED GLOBAL)
+    set_target_properties(PTScotch::PTScotch PROPERTIES
+      IMPORTED_LOCATION "${PTSCOTCH_LIBRARY}"
+      INCLUDE_DIRECTORIES "${PTSCOTCH_INCLUDE_DIRS}"
+      INTERFACE_LINK_LIBRARIES "PTScotch::Scotch;${MPI_DUNE_LIBRARIES}")
+  endif()
   # log result
   file(APPEND ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CMakeOutput.log
     "Determing location of PT-Scotch succeded:\n"

cmake/Modules/FindParMETIS.cmake

@@ -102,6 +102,13 @@ if(PARMETIS_FOUND)
     "Include directory: ${PARMETIS_INCLUDE_DIRS}\n"
     "Library directory: ${PARMETIS_LIBRARIES}\n\n")
 
+  if(NOT TARGET ParMETIS::ParMETIS)
+    add_library(ParMETIS::ParMETIS UNKNOWN IMPORTED GLOBAL)
+    set_target_properties(ParMETIS::ParMETIS PROPERTIES
+      IMPORTED_LOCATION ${PARMETIS_LIBRARY}
+      INCLUDE_DIRECTORIES "${PARMETIS_INCLUDE_DIRS}"
+      INTERFACE_LINK_LIBRARIES "${METIS_LIBRARIES};${MPI_C_LIBRARIES}")
+  endif()
 endif(PARMETIS_FOUND)
 
 mark_as_advanced(PARMETIS_INCLUDE_DIRS PARMETIS_LIBRARIES HAVE_PARMETIS)

cmake/Modules/FindQuadmath.cmake

@@ -34,11 +34,18 @@ int main(void){
   if (QUADMATH_FOUND)
     set(QUADMATH_LIBRARIES "quadmath")
     set(HAVE_QUAD "${QUADMATH_FOUND}")
+    if (NOT TARGET QuadMath::QuadMath)
+      add_library(QuadMath::QuadMath INTERFACE IMPORTED)
+      set_target_properties(QuadMath::QuadMath PROPERTIES
+	INTERFACE_LINK_LIBRARIES quadmath
+	INTERFACE_COMPILE_DEFINITIONS _GLIBCXX_USE_FLOAT128
+	INTERFACE_COMPILE_OPTIONS $<$<CXX_COMPILER_ID:GNU>:-fext-numeric-literals>)
+    endif()
   endif()
 endif()
 
 if (USE_QUADMATH AND NOT QUADMATH_FOUND)
-  message(FATAL_ERROR "Quadruple precision math support was explicitly requested but is unavailable!")
+  message(STATUS "Quadruple precision math support is unavailable! Skipping it.")
 endif()
 
 include(FindPackageHandleStandardArgs)

cmake/Modules/FindSuiteSparse.cmake

@@ -259,9 +259,9 @@ foreach (module IN LISTS SuiteSparse_FIND_COMPONENTS)
 	set (SuiteSparse_FOUND FALSE)
 	# use empty string instead of zero, so it can be tested with #ifdef
 	# as well as #if in the source code
-	set (HAVE_SUITESPARSE_${MODULE}_H "" CACHE INT "Is ${module} header present?")
+    set (HAVE_SUITESPARSE_${MODULE}_H "" CACHE STRING "Is ${module} header present?")
   else (NOT SuiteSparse_${MODULE}_FOUND)
-	set (HAVE_SUITESPARSE_${MODULE}_H 1 CACHE INT "Is ${module} header present?")
+    set (HAVE_SUITESPARSE_${MODULE}_H 1 CACHE STRING "Is ${module} header present?")
 	list (APPEND SuiteSparse_LIBRARIES "${${MODULE}_LIBRARIES}")
 	list (APPEND SuiteSparse_LINKER_FLAGS "${${MODULE}_LINKER_FLAGS}")
 	list (APPEND SuiteSparse_INCLUDE_DIRS "${${MODULE}_INCLUDE_DIRS}")
@@ -280,6 +280,32 @@ if (SuiteSparse_LIBRARIES)
   list (REVERSE SuiteSparse_LIBRARIES)
 endif (SuiteSparse_LIBRARIES)
 
+if(SuiteSparse_FOUND)
+  if(NOT TARGET SuiteSparse::SuiteSparse)
+    add_library(SuiteSparse::SuiteSparse INTERFACE IMPORTED GLOBAL)
+    set_property(TARGET SuiteSparse::SuiteSparse PROPERTY
+      INTERFACE_INCLUDE_DIRECTORIES ${SuiteSparse_INCLUDE_DIRS})
+    if(config_LIBRARY)
+      set_property(TARGET SuiteSparse::SuiteSparse PROPERTY
+	INTERFACE_LINK_LIBRARIES ${config_LIBRARY})
+    endif()
+  endif()
+  foreach(_module ${SuiteSparse_MODULES})
+    string (TOUPPER ${_module} _MODULE)
+    if(SuiteSparse_${_MODULE}_FOUND)
+      if(NOT TARGET SuiteSparse::${_module})
+	message(STATUS "Creating target SuitSparse::${_module}")
+	add_library(SuiteSparse::${_module} UNKNOWN IMPORTED GLOBAL)
+	set_target_properties(SuiteSparse::${_module} PROPERTIES
+	  IMPORTED_LOCATION ${${_MODULE}_LIBRARY}
+	  INCLUDE_DIRECTORIES ${${_MODULE}_INCLUDE_DIRS}
+	  INTERFACE_LINK_LIBRARIES "${config_LIBRARY}")
+	target_link_libraries(SuiteSparse::SuiteSparse
+          INTERFACE SuiteSparse::${_module})
+      endif()
+    endif()
+  endforeach(_module)
+endif()
 # print a message to indicate status of this package
 include (FindPackageHandleStandardArgs)
 find_package_handle_standard_args (SuiteSparse

cmake/Modules/FindSuperLU.cmake

@@ -180,6 +180,16 @@ if(SUPERLU_FOUND)
   if (SUPERLU_BLAS_LIBRARY)
     list(APPEND SUPERLU_LIBRARIES ${SUPERLU_BLAS_LIBRARY})
   endif()
+  if(NOT TARGET SuperLU::SuperLU)
+    add_library(SuperLU::SuperLU UNKNOWN IMPORTED GLOBAL)
+    set_target_properties(SuperLU::SuperLU PROPERTIES
+      IMPORTED_LOCATION ${SUPERLU_LIBRARY}
+      INCLUDE_DIRECTORIES ${SUPERLU_INCLUDE_DIRS})
+    if(SUPERLU_BLAS_LIBRARY)
+      set_property(TARGET SuperLU::SuperLU PROPERTY
+	INTERFACE_LINK_LIBRARIES ${SUPERLU_BLAS_LIBRARY})
+    endif()
+  endif()
 endif()
 
 cmake_pop_check_state()

cmake/Modules/FindTBB.cmake

@@ -0,0 +1,34 @@
+# Poor man's FindTBB that will create the CMake targets
+# used by DUNE.
+# If the TBB version is new enough it will ship its own
+# TBBConfig.cmake and we are good
+find_package(TBB QUIET CONFIG)
+
+if(NOT TBB_FOUND)
+  # Fall back to using pkgconfig
+  find_package(PkgConfig QUIET)
+  if (PKG_CONFIG_FOUND)
+    pkg_check_modules(PkgConfigTBB IMPORTED_TARGET GLOBAL tbb QUIET)
+    if(NOT TARGET PkgConfig::PkgConfigTBB)
+      # workaround bug in old FindPkgConfig.cmake which adds
+      # pkgcfg_lib_PkgConfigTBB_atomic-NOTFOUND  because it cannot
+      # find the atomic lib of the compiler (not in platforms default
+      # library path. It will therefore not create the target and we
+      # try that manually.
+      string(REPLACE ";pkgcfg_lib_PkgConfigTBB_atomic-NOTFOUND" "" _find_tbb_libs "${PkgConfigTBB_LINK_LIBRARIES}")
+      if(_find_tbb_libs)
+	add_library(PkgConfig::PkgConfigTBB INTERFACE IMPORTED GLOBAL)
+	set_property(TARGET PkgConfig::PkgConfigTBB PROPERTY
+	  INTERFACE_LINK_LIBRARIES "${_find_tbb_libs}")
+      endif()
+    endif()
+    if(TARGET PkgConfig::PkgConfigTBB)
+      if(NOT TARGET TBB::tbb)
+	message(STATUS "Found TBB library using pkg config")
+	add_library(TBB::tbb ALIAS PkgConfig::PkgConfigTBB)
+      endif()
+    endif()
+  endif(PKG_CONFIG_FOUND)
+else()
+  message(STATUS "Found TBB library using config mode")
+endif(NOT TBB_FOUND)

cmake/Modules/FindValgrind.cmake

@@ -3,13 +3,10 @@
 # This module defines:
 #  VALGRIND_INCLUDE_DIR, where to find valgrind/memcheck.h, etc.
 #  VALGRIND_PROGRAM, the valgrind executable.
-#  VALGRIND_FOUND, If false, do not try to use valgrind.
+#  Valgrind_FOUND, If false, do not try to use valgrind.
 #
 # If you have valgrind installed in a non-standard place, you can define
 # VALGRIND_ROOT to tell cmake where it is.
-if (VALGRIND_FOUND)
-  return()
-endif()
 
 find_path(VALGRIND_INCLUDE_DIR valgrind/memcheck.h
   /usr/include /usr/local/include ${VALGRIND_ROOT}/include)
@@ -18,7 +15,7 @@ find_path(VALGRIND_INCLUDE_DIR valgrind/memcheck.h
 # path, but this does not hurt...
 find_program(VALGRIND_PROGRAM NAMES valgrind PATH ${VALGRIND_ROOT}/bin)
 
-find_package_handle_standard_args(VALGRIND DEFAULT_MSG
+find_package_handle_standard_args(Valgrind DEFAULT_MSG
   VALGRIND_INCLUDE_DIR
   VALGRIND_PROGRAM)
 

cmake/Modules/FindZOLTAN.cmake

@@ -24,7 +24,7 @@ find_package(PTScotch)
 #find_package(ParMETIS)
 
 # search for files which implements this module
-find_path (ZOLTAN_INCLUDE_DIRS
+find_path (ZOLTAN_INCLUDE_DIR
   NAMES "zoltan.h"
   PATHS ${ZOLTAN_SEARCH_PATH}
   PATH_SUFFIXES include trilinos
@@ -35,7 +35,7 @@ if (CMAKE_SIZEOF_VOID_P)
   math (EXPR _BITS "8 * ${CMAKE_SIZEOF_VOID_P}")
 endif (CMAKE_SIZEOF_VOID_P)
 
-find_library(ZOLTAN_LIBRARIES
+find_library(ZOLTAN_LIBRARY
   NAMES zoltan trilinos_zoltan
   PATHS ${ZOLTAN_SEARCH_PATH}
   PATH_SUFFIXES "lib/.libs" "lib" "lib${_BITS}" "lib/${CMAKE_LIBRARY_ARCHITECTURE}"
@@ -50,15 +50,20 @@ include (FindPackageHandleStandardArgs)
 
 find_package_handle_standard_args(ZOLTAN
   DEFAULT_MSG
-  ZOLTAN_LIBRARIES
-  ZOLTAN_INCLUDE_DIRS
+  ZOLTAN_LIBRARY
+  ZOLTAN_INCLUDE_DIR
   MPI_FOUND
   )
 
 if (ZOLTAN_FOUND)
   set(HAVE_ZOLTAN 1)
-  set(ZOLTAN_LIBRARIES ${ZOLTAN_LIBRARIES} ${PARMETIS_LIBRARIES} ${PTSCOTCH_LIBRARIES})
-  set(ZOLTAN_INCLUDE_DIRS ${ZOLTAN_INCLUDE_DIRS} ${PARMETIS_INCLUDE_DIRS}
+  set(ZOLTAN_LIBRARIES ${ZOLTAN_LIBRARY} ${PARMETIS_LIBRARIES} ${PTSCOTCH_LIBRARIES})
+  set(ZOLTAN_INCLUDE_DIRS ${ZOLTAN_INCLUDE_DIR} ${PARMETIS_INCLUDE_DIRS}
       ${PTSCOTCH_INCLUDE_DIRS})
+  # log result
+  file(APPEND ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CMakeOutput.log
+    "Determing location of ZOLTAN succeeded:\n"
+    "  Include directory: ${ZOLTAN_INCLUDE_DIRS}\n"
+    "  Library directory: ${ZOLTAN_LIBRARIES}\n\n")
 endif()
 

cmake/Modules/Findcjson.cmake

@@ -36,8 +36,8 @@ find_library (CJSON_LIBRARY
   ${_no_default_path} )
 
 # setup list of all required libraries to link with cjson
-set (CJSON_INCLUDE_DIRS ${CJSON_INCLUDE_DIR})
-set (CJSON_LIBRARIES ${CJSON_LIBRARY})
+set (cjson_INCLUDE_DIRS ${CJSON_INCLUDE_DIR})
+set (cjson_LIBRARIES ${CJSON_LIBRARY})
 
 # math library (should exist on all unices; automatically linked on Windows)
 if (UNIX)
@@ -72,10 +72,7 @@ endif ()
 
 # if the test program didn't compile, but was required to do so, bail
 # out now and display an error; otherwise limp on
-set (CJSON_FIND_REQUIRED ${cjson_FIND_REQUIRED})
-set (CJSON_FIND_QUIETLY ${cjson_FIND_QUIETLY})
-find_package_handle_standard_args (CJSON
+find_package_handle_standard_args (cjson
   DEFAULT_MSG
-  CJSON_INCLUDE_DIRS CJSON_LIBRARIES HAVE_CJSON
+  cjson_INCLUDE_DIRS cjson_LIBRARIES HAVE_CJSON
   )
-set (cjson_FOUND ${CJSON_FOUND})

cmake/Modules/Finddune-common.cmake

@@ -19,7 +19,9 @@ find_opm_package (
   "BLAS REQUIRED;
   LAPACK REQUIRED;
   CxaDemangle;
-  MPI
+  MPI;
+  TBB;
+  GMP
   "
   # header to search for
   "dune/common/fvector.hh"

cmake/Modules/Finddune-fem.cmake

@@ -24,7 +24,8 @@ find_opm_package (
    dune-alugrid;
    ZLIB;
    ZOLTAN;
-   METIS
+   METIS;
+   Quadmath
   "
   # header to search for
   "dune/fem/space/shapefunctionset/legendre.hh"

cmake/Modules/Finddune-istl.cmake

@@ -19,7 +19,7 @@ find_opm_package (
   "dune-common REQUIRED;
   ParMETIS;
   SuperLU;
-  SuiteSparse COMPONENTS umfpack
+  SuiteSparse COMPONENTS umfpack REQUIRED
   "
   # header to search for
   "dune/istl/bcrsmatrix.hh"

cmake/Modules/OpmCompile.cmake

@@ -38,7 +38,7 @@ macro (opm_compile opm)
   endif()
   set (${opm}_VERSION "${${opm}_VERSION_MAJOR}.${${opm}_VERSION_MINOR}")
   if (${opm}_SOURCES)
-        add_library (${${opm}_TARGET} ${${opm}_LIBRARY_TYPE} ${${opm}_SOURCES})
+        add_library (${${opm}_TARGET} ${${opm}_LIBRARY_TYPE} ${${opm}_SOURCES} ${${opm}_HEADERS})
         set_target_properties (${${opm}_TARGET} PROPERTIES
           SOVERSION ${${opm}_VERSION}
           VERSION ${${opm}_VERSION}

cmake/Modules/OpmFind.cmake

@@ -128,35 +128,41 @@ macro (find_and_append_package_to prefix name)
     # We even need to repeat the search for opm-common once as this is done
     # in the top most CMakeLists.txt without querying defines, setting dependencies
     # and the likes which is only done via opm_find_package
-    if ( (NOT DEFINED ${name}_FOUND AND NOT DEFINED ${NAME}_FOUND )
-         OR _search_components GREATER -1)
-      string(REGEX MATCH "(opm)-.*" _is_opm ${name})
-      if(NOT _is_opm)
-        # When using Boost >= 1.70 and e.g. CMake 3.18 we need to make sure that
-        # subsequent searches are using config mode too. Otherwise the library
-        # list will be completely messed up. We use a set Boost_Dir to detect that
-        # previous searches were done using config mode.
-        if("${name}" STREQUAL "Boost" AND Boost_DIR)
-          set(_CONFIG_MODE CONFIG)
-        else()
-          set(_CONFIG_MODE "")
-        endif()
-        find_package (${name} ${ARGN} ${_CONFIG_MODE})
+    string(REGEX MATCH "(opm)-.*" _is_opm ${name})
+    if(NOT _is_opm)
+      # When using Boost >= 1.70 and e.g. CMake 3.18 we need to make sure that
+      # subsequent searches are using config mode too. Otherwise the library
+      # list will be completely messed up. We use a set Boost_Dir to detect that
+      # previous searches were done using config mode.
+      if("${name}" STREQUAL "Boost" AND Boost_DIR)
+        set(_CONFIG_MODE CONFIG)
       else()
-        if(${name}_DIR)
-          find_package (${name} ${${prefix}_VERSION_MAJOR}.${${prefix}_VERSION_MINOR} ${ARGN} NO_MODULE PATHS ${${name}_DIR} NO_DEFAULT_PATH)
-        else()
-          find_package (${name} ${${prefix}_VERSION_MAJOR}.${${prefix}_VERSION_MINOR} ${ARGN} NO_MODULE)
-        endif()
-        include(FindPackageHandleStandardArgs)
-        if(${name}_FOUND AND ${name}_LIBRARY STREQUAL "")
-          find_package_handle_standard_args(${name}
-                                            REQUIRED_VARS ${name}_INCLUDE_DIRS)
-        else()
-          find_package_handle_standard_args(${name}
-                                            REQUIRED_VARS ${name}_LIBRARY)
-        endif()
-      endif ()
+        set(_CONFIG_MODE "")
+      endif()
+      find_package (${name} ${ARGN} ${_CONFIG_MODE})
+    else()
+      if(${name}_DIR)
+        find_package (${name} ${${prefix}_VERSION_MAJOR}.${${prefix}_VERSION_MINOR} ${ARGN} NO_MODULE PATHS ${${name}_DIR} NO_DEFAULT_PATH)
+      else()
+        find_package (${name} ${${prefix}_VERSION_MAJOR}.${${prefix}_VERSION_MINOR} ${ARGN} NO_MODULE)
+      endif()
+      include(FindPackageHandleStandardArgs)
+      if( CMAKE_VERSION VERSION_GREATER_EQUAL "3.17")
+	# For some reason we will e.g. call
+	# find_package_handle_standard_args(opm-common)
+	# in a find_package(opm-material) call and this will
+	# usuallly print an annoying warnig. Prevent this at least
+	# for cmake >=3.17
+	# \todo Check why/whether these calls are even needed.
+	set(_NAME_MISMATCHED "NAME_MISMATCHED")
+      endif()
+      if(${name}_FOUND AND ${name}_LIBRARY STREQUAL "")
+        find_package_handle_standard_args(${name}
+          REQUIRED_VARS ${name}_INCLUDE_DIRS ${_NAME_MISMATCHED})
+      else()
+        find_package_handle_standard_args(${name}
+          REQUIRED_VARS ${name}_LIBRARY ${_NAME_MISMATCHED})
+      endif()
     endif ()
     if (NOT DEFINED ${name}_FOUND)
       set (${name}_FOUND "${${NAME}_FOUND}")

cmake/Modules/OpmInit.cmake

@@ -130,7 +130,7 @@ endif ()
 
 # parallel computing must be explicitly enabled
 # This needs to be in OpmInit as prereqs is called before OpmLibMain is included.
-option (USE_MPI "Use Message Passing Interface for parallel computing" OFF)
+option (USE_MPI "Use Message Passing Interface for parallel computing" ON)
 if (NOT USE_MPI)
   set (CMAKE_DISABLE_FIND_PACKAGE_MPI TRUE)
 endif ()
@@ -144,7 +144,12 @@ set(CMAKE_CXX_EXTENSIONS OFF)
 
 # quadmath must be explicitly enabled
 # This needs to be in OpmInit as prereqs is called before OpmLibMain is included.
-option (USE_QUADMATH "Use high precision floating point library (slow)" OFF)
+option (USE_QUADMATH "Search for high precision floating point library (normally not used)" ON)
 if (NOT USE_QUADMATH)
   set (CMAKE_DISABLE_FIND_PACKAGE_QuadMath TRUE)
 endif ()
+
+option (USE_SUPERLU "Use SuperLU direct solvers for AMG (if umfpack is not found)" ON)
+if (NOT USE_SUPERLU)
+  set (CMAKE_DISABLE_FIND_PACKAGE_SuperLU TRUE)
+endif ()

cmake/Modules/OpmLibMain.cmake

@@ -63,9 +63,6 @@ find_openmp (${project})
 include (UseThreads)
 find_threads (${project})
 
-# SuperLU is optional
-option (USE_SUPERLU "Use SuperLU direct solvers" OFF)
-
 # PETSc is optional
 option (USE_PETSC "Use PETSc iterative solvers" OFF)
 

cmake/Modules/OpmPackage.cmake

@@ -124,7 +124,7 @@ macro (find_opm_package module deps header lib defs prog conf)
   # without config.h
   config_cmd_line (${module}_CMD_CONFIG ${module}_CONFIG_VARS)
 
-  if(prog)
+  if(prog) # always evaluates to false, but makes tests with DUNE 2.6-2.7 work
     # check that we can compile a small test-program
     include (CMakePushCheckState)
     cmake_push_check_state ()
@@ -138,13 +138,16 @@ macro (find_opm_package module deps header lib defs prog conf)
     list (APPEND CMAKE_REQUIRED_DEFINITIONS ${${module}_CMD_CONFIG})
     check_cxx_source_compiles ("${prog}" HAVE_${MODULE})
     cmake_pop_check_state ()
-  else(prog)
+  else()
     if(${module}_FOUND)
       # No test code provided, mark compilation as successful
-      # if module was founf
-      set(HAVE_${MODULE} 1)
+      # if module was found
+      # Has to be cached because of scope. Otherwise it is not accessible
+      # where it is used.
+      set(HAVE_${MODULE} 1 CACHE BOOL "${module} found")
+      mark_as_advanced(HAVE_${MODULE})
     endif(${module}_FOUND)
-  endif(prog)
+  endif()
 
   # write status message in the same manner as everyone else
   include (FindPackageHandleStandardArgs)

cmake/Modules/OpmProject.cmake

@@ -54,6 +54,12 @@ function (configure_cmake_file name variant version)
   foreach (suffix IN LISTS variable_suffices)
 	set (opm-project_${suffix} "${${name}_${suffix}}")
   endforeach (suffix)
+
+  if (BUILD_SHARED_LIBS)
+    # No need to list shared libraries as the linker information is alread
+    # in the shared lib
+    string(REGEX REPLACE ";?[^;]*.so" "" opm-project_LIBRARIES "${opm-project_LIBRARIES}")
+  endif()
   set (opm-project_NAME "${${name}_NAME}")
   set (opm-project_NAME_UC "${${name}_NAME}")
   string(TOUPPER "${opm-project_NAME}" opm-project_NAME_UC)

cmake/Modules/OpmSatellites.cmake

@@ -338,7 +338,7 @@ macro(opm_add_test TestName)
       # has been specified to supervise the test binary, use it else
       # run the test binary "naked".
       if (CURTEST_DRIVER)
-        set(CURTEST_COMMAND ${CURTEST_DRIVER} ${CURTEST_DRIVER_ARGS} ${CURTEST_EXE_NAME} ${CURTEST_TEST_ARGS})
+        set(CURTEST_COMMAND ${CURTEST_DRIVER} ${CURTEST_DRIVER_ARGS} -e ${CURTEST_EXE_NAME} -- ${CURTEST_TEST_ARGS})
       else()
         set(CURTEST_COMMAND ${PROJECT_BINARY_DIR}/bin/${CURTEST_EXE_NAME})
         if (CURTEST_TEST_ARGS)

cmake/Modules/PyInstallPrefix.cmake

@@ -0,0 +1,28 @@
+# We make this a cmake module so it can be used from opm-simulators' CMakeLists.txt also
+execute_process(COMMAND ${PYTHON_EXECUTABLE} -c "
+import site, sys
+try:
+    sys.stdout.write(site.getsitepackages()[-1])
+except e:
+    sys.stdout.write('')" OUTPUT_VARIABLE PYTHON_SITE_PACKAGES_PATH)
+  # -------------------------------------------------------------------------
+  # 1: Wrap C++ functionality in Python
+if (PYTHON_SITE_PACKAGES_PATH MATCHES ".*/dist-packages/?" AND
+    CMAKE_INSTALL_PREFIX MATCHES "^/usr.*")
+  # dist-packages is only used if we install below /usr and python's site packages
+  # path matches dist-packages
+  set(PYTHON_PACKAGE_PATH "dist-packages")
+else()
+  set(PYTHON_PACKAGE_PATH "site-packages")
+endif()
+if(PYTHON_VERSION_MAJOR)
+  set(PY_MAJOR ${PYTHON_VERSION_MAJOR})
+else()
+  set(PY_MAJOR ${Python3_VERSION_MAJOR})
+endif()
+if(PYTHON_VERSION_MINOR)
+  set(PY_MINOR ${PYTHON_VERSION_MINOR})
+else()
+  set(PY_MINOR ${Python3_VERSION_MINOR})
+endif()
+set(PYTHON_INSTALL_PREFIX "lib/python${PY_MAJOR}.${PY_MINOR}/${PYTHON_PACKAGE_PATH}" CACHE STRING "Subdirectory to install Python modules in")

cmake/Modules/UseDamaris.cmake

@@ -0,0 +1,27 @@
+if(USE_DAMARIS_LIB AND MPI_FOUND)
+  if (Damaris_FOUND)
+    set(HAVE_DAMARIS 1)
+    message(STATUS "The Damaris library was found: ${Damaris_VERSION} ${Damaris_DIR}")
+    if (Damaris_HAS_HDF5)
+      message(STATUS "The Damaris library has HDF5 support: ${HDF5_VERSION}")
+    else()
+      message(STATUS "The Damaris library does NOT have HDF5 support")
+    endif()
+    if (Damaris_HAS_VISIT)
+      message(STATUS "The Damaris library has VisIt support: ${VisIt_VERSION}")
+    else()
+      message(STATUS "The Damaris library does NOT have VisIt support")
+    endif()
+    if (Damaris_HAS_CATALYST)
+      message(STATUS "The Damaris library has Catalyst support: ${Catalyst_VERSION}  ${Paraview_VERSION}")
+    else()
+      message(STATUS "The Damaris library does NOT have Catalyst support")
+    endif()
+  else()
+    message(STATUS "The Damaris library was requested but NOT found")
+  endif()
+else()  # User did not request Damaris support
+  unset(HAVE_DAMARIS)
+endif()
+
+mark_as_advanced(HAVE_DAMARIS)

cmake/Modules/UseVersion.cmake

@@ -17,6 +17,9 @@ message("-- Writing version information to local header project-version.h")
 string (TIMESTAMP build_timestamp "%Y-%m-%d at %H:%M:%S hrs")
 
 string (TOUPPER "${CMAKE_BUILD_TYPE}" cmake_build_type_upper_)
+set(OPM_BINARY_PACKAGE_VERSION "" CACHE STRING
+  "Version of the binary Linux package built (will be printed in PRT file of flow if not empty)")
+string(LENGTH "${OPM_BINARY_PACKAGE_VERSION}" _BINARY_PACKAGE_VERSION_LENGTH)
 if (cmake_build_type_upper_ MATCHES DEBUG)
   file (WRITE "${PROJECT_BINARY_DIR}/project-version.h"
         "#ifndef OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
@@ -43,22 +46,30 @@ else ()
   # system, so there is "no" way we can update the SHA. notice
   # that this is a slightly different version of the label than
   # above.
-  if (NOT GIT_FOUND)
-	file (WRITE "${PROJECT_BINARY_DIR}/project-version.h"
-              "#ifndef OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
-              "#define OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
-              "#define PROJECT_VERSION_NAME \"${${project}_LABEL}\"\n"
-              "#define PROJECT_VERSION_HASH \"unknown git version\"\n"
-              "#define PROJECT_VERSION \"${${project}_LABEL} (unknown git version)\"\n"
-              "#endif // OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
-              )
-  # Write header file with build timestamp
-  file (WRITE "${PROJECT_BINARY_DIR}/project-timestamp.h"
-      "#ifndef OPM_GENERATED_OPM_TIMESTAMP_HEADER_INCLUDED\n"
-      "#define OPM_GENERATED_OPM_TIMESTAMP_HEADER_INCLUDED\n"
-      "#define BUILD_TIMESTAMP \"${build_timestamp}\"\n"
-      "#endif // OPM_GENERATED_OPM_TIMESTAMP_HEADER_INCLUDED\n"
+  if (NOT GIT_FOUND OR NOT EXISTS ${PROJECT_SOURCE_DIR}/.git)
+    if(_BINARY_PACKAGE_VERSION_LENGTH GREATER 0)
+      set(_PROJECT_VERSION_HASH "${OPM_BINARY_PACKAGE_VERSION}")
+    else()
+      set(_PROJECT_VERSION_HASH "unknown git version")
+    endif()
+    file (WRITE "${PROJECT_BINARY_DIR}/project-version.h"
+      "#ifndef OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
+      "#define OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
+      "#define PROJECT_VERSION_NAME \"${${project}_LABEL}\"\n"
+      "#define PROJECT_VERSION_HASH \"${_PROJECT_VERSION_HASH}\"\n"
+      "#define PROJECT_VERSION \"${${project}_LABEL} (${_PROJECT_VERSION_HASH})\"\n"
+      "#endif // OPM_GENERATED_OPM_VERSION_HEADER_INCLUDED\n"
       )
+    # Write header file with build timestamp
+    file (WRITE "${PROJECT_BINARY_DIR}/project-timestamp.h"
+      "#ifndef OPM_GENERATED_OPM_TIMESTAMP_HEADER_INCLUDED\n"
+      "#define OPM_GENERATED_OPM_TIMESTAMP_HEADER_INCLUDED\n")
+    if (_BINARY_PACKAGE_VERSION_LENGTH EQUAL 0)
+      file(APPEND "${PROJECT_BINARY_DIR}/project-timestamp.h"
+	"#define BUILD_TIMESTAMP \"${build_timestamp}\"\n")
+    endif()
+    file(APPEND "${PROJECT_BINARY_DIR}/project-timestamp.h"
+      "#endif // OPM_GENERATED_OPM_TIMESTAMP_HEADER_INCLUDED\n")
   else ()
 	add_custom_target (update-version ALL
 	  COMMAND ${CMAKE_COMMAND}

cmake/Templates/opm-project-config.cmake.in

@@ -58,6 +58,7 @@ if(NOT @opm-project_NAME@_FOUND)
     string(REPLACE ${@opm-project_NAME@_PREFIX} ${DEST_PREFIX} @opm-project_NAME@_INCLUDE_DIRS "${@opm-project_NAME@_INCLUDE_DIRS}")
     string(REPLACE ${@opm-project_NAME@_PREFIX} ${DEST_PREFIX} @opm-project_NAME@_LIBRARY_DIRS "${@opm-project_NAME@_LIBRARY_DIRS}")
     string(REPLACE ${@opm-project_NAME@_PREFIX} ${DEST_PREFIX} @opm-project_NAME@_LIBRARY      "${@opm-project_NAME@_LIBRARY}")
+    string(REPLACE ${@opm-project_NAME@_PREFIX} ${DEST_PREFIX} @opm-project_NAME@_PYTHON_COMMON_DIR "${@opm-project_NAME@_PYTHON_COMMON_DIR}")
   endif()
 
 
@@ -107,7 +108,18 @@ if(NOT @opm-project_NAME@_FOUND)
   # The settings in this block do not mix well with the DEST_PREFIX
   # setting.
   if (NOT DEST_PREFIX)
-    # This is required to include OpmPackage
+    # if this file is not processed using the OPM CMake system but
+    # simply by a call to find_package(module) then the CMAKE_MODULE_PATH
+    # might not include the location of the OPM cmake module yet.
+    # Hence we search for opm-common using config mode to set it up.
+    # The check for opm-common_PREFIX is there to not do this in
+    # opm-common-config.cmake
+    if(NOT opm-common_PREFIX
+        AND NOT opm-common_FOUND)
+      # This needed to find the path to the CMake modules
+      find_package(opm-common CONFIG)
+    endif()
+    # This is required to include OpmPackage /opm-common-prereq.cmake
     set(CMAKE_MODULE_PATH "${CMAKE_MODULE_PATH}" @PREREQ_LOCATION@)
 
     # extra code from variable OPM_PROJECT_EXTRA_CODE

cmake/Templates/opm-project.pc.in

@@ -9,5 +9,6 @@ Name: @name@
 Description: @description@ @major@.@minor@
 Version: @major@.@minor@
 URL: http://opm-project.org
-Libs: @target@ @libs@
+Libs.private: @libs@
+Libs: @target@
 Cflags: @includes@ @defs@

cmake/Templates/style.css

@@ -1,4 +1,4 @@
-/* Userspesific CSS for doxygen */
+/* Userspecific CSS for doxygen */
 body, table, div, p, dl {
 	font-family: Lucida Grande, Verdana, Geneva, Arial, sans-serif;
 	font-size: 16px;

debian/changelog

@@ -1,5 +0,0 @@
-opm-common (2019.04-pre~xenial) xenial; urgency=medium
-
-  * New release
-
- -- Arne Morten Kvarving <arne.morten.kvarving@sintef.no>  Mon, 19 Oct 2015 10:49:00 +0200

debian/compat

@@ -1 +0,0 @@
-9

debian/control

@@ -1,64 +0,0 @@
-Source: opm-common
-Priority: extra
-Maintainer: Arne Morten Kvarving <arne.morten.kvarving@sintef.no>
-Build-Depends: build-essential, debhelper (>= 9),
-               pkg-config, cmake, git, libtool, doxygen, graphviz,
-               texlive-latex-extra, texlive-latex-recommended,
-               ghostscript, libboost-system-dev, libboost-test-dev,
-               zlib1g-dev, libpython3-dev, python3-numpy, python3-distutils,
-               python3-setuptools, python3-setuptools-scm, python3-pytest-runner,
-               python3-decorator
-Standards-Version: 3.9.2
-Section: libs
-Homepage: http://opm-project.org
-Vcs-Git: git://github.com/OPM/opm-common.git
-Vcs-Browser: https://github.com/OPM/opm-common
-
-Package: libopm-common1
-Section: libs
-Pre-Depends: ${misc:Pre-Depends}
-Architecture: any
-Multi-Arch: same
-Depends: ${shlibs:Depends}, ${misc:Depends}
-Provides: libopm-common
-Description: OPM common library
- The OPM common library contains generic code shared across all OPM modules.
-
-Package: libopm-common1-bin
-Section: libs
-Pre-Depends: ${misc:Pre-Depends}
-Architecture: any
-Multi-Arch: same
-Depends: ${shlibs:Depends}, ${misc:Depends}
-Provides: libopm-common-bin
-Description: OPM common binaries
- The OPM common binaries.
-
-Package: libopm-common1-dev
-Section: libdevel
-Architecture: any
-Multi-Arch: foreign
-Provides: libopm-common-dev
-Suggests: libopm-common1-doc
-Depends: libopm-common1 (= ${binary:Version})
-Description: OPM common library -- development files
- The OPM common library contains the shared buildsystem
- and helpers shared across all OPM modules.
-
-Package: libopm-common1-doc
-Section: doc
-Architecture: all
-Multi-Arch: foreign
-Provides: libopm-common-doc
-Description: OPM common library -- documentation
- The OPM common library contains the shared buildsystem
- and helpers shared across all OPM modules.
-
-Package: python3-opm-common
-Section: libs
-Pre-Depends: ${misc:Pre-Depends}
-Architecture: any
-Multi-Arch: same
-Depends: ${shlibs:Depends}, ${misc:Depends}, libopm-common1, python3-numpy, python3-decorator
-Description: OPM common python bindings
-  Python package for opm-common

debian/copyright

@@ -1,13 +0,0 @@
-License: GPL-3+
- This package is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation; either version 3 of the License, or
- (at your option) any later version.
-
- This package is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>

debian/docs

@@ -1,2 +0,0 @@
-LICENSE
-README.md

debian/libopm-common1-bin.install

@@ -1 +0,0 @@
-usr/bin/*

debian/libopm-common1-dev.install

@@ -1,6 +0,0 @@
-usr/include/*
-usr/lib/dunecontrol/*
-usr/lib/*/pkgconfig/*
-usr/share/cmake/*
-usr/share/opm/*
-usr/lib/*/lib*.so

debian/libopm-common1-doc.install

@@ -1 +0,0 @@
-usr/share/doc/*

debian/libopm-common1.install

@@ -1 +0,0 @@
-usr/lib/*/lib*.so.*

debian/python3-opm-common.install

@@ -1 +0,0 @@
-usr/lib/python*/*

debian/rules

@@ -1,29 +0,0 @@
-#!/usr/bin/make -f
-# -*- makefile -*-
-# Sample debian/rules that uses debhelper.
-# This file was originally written by Joey Hess and Craig Small.
-# As a special exception, when this file is copied by dh-make into a
-# dh-make output file, you may use that output file without restriction.
-# This special exception was added by Craig Small in version 0.37 of dh-make.
-
-# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
-
-%:
-	dh $@ --parallel
-
-override_dh_auto_clean:
-	dh_auto_clean --buildsystem=cmake
-
-override_dh_auto_build:
-	dh_auto_build --buildsystem=cmake
-
-# consider using -DUSE_VERSIONED_DIR=ON if backporting
-override_dh_auto_configure:
-	dh_auto_configure --buildsystem=cmake -- -DCMAKE_BUILD_TYPE=RelWithDebInfo -DSTRIP_DEBUGGING_SYMBOLS=ON -DBUILD_SHARED_LIBS=1 -DCMAKE_INSTALL_DOCDIR=share/doc/libopm-common1 -DWHOLE_PROG_OPTIM=ON -DUSE_RUNPATH=OFF -DWITH_NATIVE=OFF -DOPM_ENABLE_PYTHON=1 -DOPM_INSTALL_PYTHON=1 -DPYTHON_EXECUTABLE=/usr/bin/python3 -DOPM_ENABLE_EMBEDDED_PYTHON=1
-
-override_dh_auto_install:
-	dh_auto_install -- install-html
-
-override_dh_installdocs:
-	dh_installdocs --link-doc=libopm-common1

debian/source/format

@@ -1 +0,0 @@
-1.0

docs/keywords.txt

@@ -297,7 +297,7 @@ composite units based on the dimension of the composite quantity. As a
 consequence the list of dimensions supported by the parser is long,
 and growing. The current list can be found in the source file:
 
-   opm/parser/eclipse/Units/UnitSystem.cpp
+   opm/input/eclipse/Units/UnitSystem.cpp
 
 
 

docs/man1/arraylist.1

@@ -0,0 +1,11 @@
+.TH SUMMARY "1" "October 2022" "arraylist 2022.10" "User Commands"
+.SH NAME
+summary \- Printer for list of arrays in Eclipse summary files
+.SH DESCRIPTION
+List all arrays found in an EclFile specified on the command line.
+.PP
+.SH OPTIONS
+\fB\-h\fR Print help and exit.
+.TP
+\fB\-r\fR List array for a specific report time step number. Option only valid for a unified restart file.
+.PP

docs/man1/compareECL.1

@@ -1,5 +1,4 @@
-.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.8.
-.TH COMPAREECL "1" "April 2021" "compareECL 2020.04" "User Commands"
+.TH COMPAREECL "1" "October 2022" "compareECL 2022.10" "User Commands"
 .SH NAME
 compareECL \- Comparator for Eclipse files
 .SH DESCRIPTION
@@ -11,55 +10,57 @@ The program takes four arguments:
 3. Absolute tolerance
 4. Relative tolerance (between 0 and 1)
 .PP
+.SH OPTIONS
+.HP
 In addition, the program takes these options (which must be given before the arguments):
 .PP
 \fB\-a\fR Run a full analysis of errors.
+.TP
 \fB\-h\fR Print help and exit.
+.TP
 \fB\-d\fR Use report steps only when comparing results from summary files.
+.TP
 \fB\-i\fR Execute integration test (regression test is default).
 .IP
 The integration test compares SGAS, SWAT and PRESSURE in unified restart files, and WOPR, WGPR, WWPR and WBHP (all wells) in summary file.
 .PP
 \fB\-k\fR Specify specific keyword to compare (capitalized), for examples \fB\-k\fR PRESSURE or \fB\-k\fR WOPR:A\-1H
-\fB\-l\fR Only do comparison for the last Report Step. This option is only valid for restart files.
-\fB\-n\fR Do not throw on errors.
-\fB\-p\fR Print keywords in both cases and exit.
-\fB\-r\fR compare a spesific report time step number in a restart file.
-\fB\-t\fR Specify ECLIPSE filetype to compare, (default behaviour is that all files are compared if found). Different possible arguments are:
 .TP
+\fB\-l\fR Only do comparison for the last Report Step. This option is only valid for restart files.
+.TP
+\fB\-n\fR Do not throw on errors.
+.TP
+\fB\-p\fR Print keywords in both cases and exit.
+.TP
+\fB\-r\fR compare a specific report time step number in a restart file.
+.TP
+\fB\-t\fR Specify ECLIPSE filetype to compare, (default behaviour is that all files are compared if found). Different possible arguments are:
+.IP
 \fB\-t\fR UNRST
 Compare two unified restart files (.UNRST). This the default value, so it is the same as not passing option \fB\-t\fR.
-.TP
+.IP
 \fB\-t\fR EGRID
 Compare two EGrid files (.EGRID).
-.TP
+.IP
 \fB\-t\fR INIT
 Compare two initial files (.INIT).
-.TP
+.IP
 \fB\-t\fR RFT
 Compare two RFT files (.RFT).
-.TP
+.IP
 \fB\-t\fR SMRY
 Compare two cases consistent of (unified) summary files.
+.IP
+\fB\-t\fR RSM
+Compare RSM file against a summary file.
 .PP
 \fB\-x\fR Allow extra keywords in case number 2. These additional keywords (not found in case number1) will be ignored in the comparison.
 .PP
-Example usage of the program:
+.SH Example usage of the program:
 .PP
 compareECL \fB\-k\fR PRESSURE <path to first casefile> <path to second casefile> 1e\-3 1e\-5
 compareECL \fB\-t\fR INIT \fB\-k\fR PORO <path to first casefile> <path to second casefile> 1e\-3 1e\-5
 compareECL \fB\-i\fR <path to first casefile> <path to second casefile> 0.01 1e\-6
 .PP
 Exceptions are thrown (and hence program exits) when deviations are larger than the specified tolerances, or when the number of cells does not match \fB\-\-\fR either in the grid file or for a specific keyword. Information about the keyword, keyword occurrence (zero based) and cell coordinate is printed when an exception is thrown. For more information about how the cases are compared, see the documentation of the EclFilesComparator class.
-.SH "SEE ALSO"
-The full documentation for
-.B compareECL
-is maintained as a Texinfo manual.  If the
-.B info
-and
-.B compareECL
-programs are properly installed at your site, the command
-.IP
-.B info compareECL
-.PP
-should give you access to the complete manual.
+

docs/man1/convertECL.1

@@ -1,5 +1,4 @@
-.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.8.
-.TH CONVERTECL "1" "April 2021" "convertECL 2020.04" "User Commands"
+.TH CONVERTECL "1" "October 2022" "convertECL 2022.10" "User Commands"
 .SH NAME
 convertECL \- Converter for Eclipse files (binary <-> formatted format)
 .SH DESCRIPTION
@@ -7,18 +6,13 @@ convertECL needs one argument which is the input file to be converted. If this i
 .PP
 In addition, the program takes these options (which must be given before the arguments):
 .PP
+.SH OPTIONS
+.HP
 \fB\-h\fR Print help and exit.
+.TP
 \fB\-l\fR list report step numbers in the selected restart file.
-\fB\-r\fR extract and convert a spesific report time step number from a unified restart file.
-.SH "SEE ALSO"
-The full documentation for
-.B convertECL
-is maintained as a Texinfo manual.  If the
-.B info
-and
-.B convertECL
-programs are properly installed at your site, the command
-.IP
-.B info convertECL
+.TP
+\fB\-i\fR Enforce IX standard on output file.
+.TP
+\fB\-r\fR extract and convert a specific report time step number from a unified restart file.
 .PP
-should give you access to the complete manual.

docs/man1/opmhash.1

@@ -1,5 +1,4 @@
-.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.8.
-.TH OPMHASH "1" "April 2021" "opmhash 2020.04" "User Commands"
+.TH OPMHASH "1" "October 2022" "opmhash 2022.10" "User Commands"
 .SH NAME
 opmhash \- Hasher for summary keywords in Eclipse files
 .SH DESCRIPTION
@@ -40,15 +39,11 @@ depends on the keyword order.
 \fB\-l\fR : Add filename and linenumber information to each keyword.
 .HP
 \fB\-s\fR : Short form \- only print the hash of the complete deck.
-.SH "SEE ALSO"
-The full documentation for
-.B opmhash
-is maintained as a Texinfo manual.  If the
-.B info
-and
-.B opmhash
-programs are properly installed at your site, the command
-.IP
-.B info opmhash
+.HP
+\fB\-S\fR : Silent form \- will not print any deck output.
 .PP
-should give you access to the complete manual.
+It is possible to add multiple deck arguments, they are then scanned repeatedly,
+and the decks are compared. In the case of multiple deck arguments the exit
+status of the program will be zero if all are equal and nonzero in case of
+differences.
+

docs/man1/opmpack.1

@@ -1,10 +1,7 @@
-.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.8.
-.TH OPMPACK "1" "April 2021" "opmpack 2020.04" "User Commands"
+.TH OPMPACK "1" "October 2022" "opmpack 2022.10" "User Commands"
 .SH NAME
 opmpack \- Validator and printer of deck in Eclipse files without comments
 .SH DESCRIPTION
-opmpack: invalid option \fB\-\-\fR 'h'
-.PP
 The opmpack program will load a deck, resolve all include
 files and then print it out again on stdout. All comments
 will be stripped and the value types will be validated.
@@ -28,15 +25,4 @@ opmpack \fB\-o\fR NEW_CASE.DATA path/to/MY_CASE.DATA
 As an alternative to the \fB\-o\fR option you can use \fB\-c\fR; that is equivalent to \fB\-o\fR \-
 but restart and import files referred to in the deck are also copied. The \fB\-o\fR and
 \fB\-c\fR options are mutually exclusive.
-.SH "SEE ALSO"
-The full documentation for
-.B opmpack
-is maintained as a Texinfo manual.  If the
-.B info
-and
-.B opmpack
-programs are properly installed at your site, the command
-.IP
-.B info opmpack
-.PP
-should give you access to the complete manual.
+

docs/man1/rst_deck.1

@@ -1,7 +1,88 @@
-.TH RST_DECK
+.TH RST_DECK: "1" "October 2022" "rst_deck 2022.10" "User Commands"
 .SH NAME
-rst_deck \- Create a version of deck ready for restart
-
-
-
-
+rst_deck \- Convert simulation deck to a deck ready for restart
+.SH DESCRIPTION
+The rst_deck program will load a simulation deck and parameters for a restart
+and reformat the deck to become a restart deck. Before the updated deck is
+output the program will update the SOLUTION and SCHEDULE sections. All keywords
+from the SOLUTION section will be cleared out(1) and a RESTART keyword will be
+inserted. In the SCHEDULE section the program can either remove all keywords up
+until the restart date, or alternatively insert SKIPREST immediately following
+the SCHEDULE keyword.
+.PP
+When creating the updated restart deck the program can either link to unmodified
+include files with INCLUDE statements, create a copy of deck structure in an
+alternative location or create one large file with all keywords in the same
+file. Apart from the alterations to support restart the output deck will be
+equivalent to the input deck, but formatting is not retained and comments have
+been stripped away.
+.PP
+Arguments:
+.PP
+1. The data file we are starting with.
+.PP
+2. The restart source; this can either be a basename with an optional path
+.IP
+prefix and a :N to restart from step N; alternatively you can point to an
+existing restart file. If you point to an existing restart file the input
+will be validated in several ways:
+.IP
+a) Unified/multiple files will be checked against the UNIFIN setting of
+.IP
+the deck.
+.IP
+b) Formatted/unformatted will be checked against the FMTIn setting of the
+.IP
+deck.
+.IP
+c) If a single file like \fI\,/path/to/case/HISTORY.X0067\/\fP is given as argument the
+.IP
+:N notation to denote report step should not be used.
+.IP
+If the restart argument is given as the path to an existing file the content
+of the RESTART keyword will be updated to contain the correct path from the
+location of the restart deck to the location of the restart file. This path
+awareness will be fooled if the restart deck is redirected from stdout to a
+path different from cwd. If the restart argument is given as an absolute
+filename the RESTART keyword will have an absolute path, if the restart
+argument is a relative path the RESTART keyword will get a relative path \-
+although an absolute path will be used if the restart file and the output
+deck have different roots. If the restart argument is given as a string not
+pointing to an existing file it will be inserted verbatim in the restart
+deck.
+.IP
+A restart step value of 0 is interpreted as a dry run \- a deck which has not
+been set up for restart will be written out.
+.PP
+3. Basename of the restart deck we create, can optionally contain a path prefix;
+.IP
+the path will be created if it does not already exist. This argument is
+optional, if it is not provided the program will dump a restart deck on
+stdout. If the argument corresponds to an existing directory the restart case
+will get the same name as the base case.
+.SH OPTIONS
+\fB\-s\fR: Manipulate the SCHEDULE section by inserting a SKIPREST keyword immediately
+.IP
+following the SCHEDULE keyword. If the \fB\-s\fR option is not used the SCHEDULE
+section will be modified by removing all keywords until we reach the restart
+date.
+.PP
+\fB\-m\fR: [share|inline|copy] The restart deck can reuse the unmodified include files
+.IP
+from the base case, this is mode 'share' and is the default. With mode
+\&'inline' the restart deck will be one long file and with mode 'copy' the
+file structure of the base case will be retained. The default if no \fB\-m\fR
+option is given is the 'share' mode.
+.IP
+In the case of 'share' and 'copy' the correct path to include files will be
+negotiated based on the path given to the output case in the third argument.
+If the restart deck is passed to stdout the include files will be resolved
+based on output in cwd.
+.PP
+Example:
+.IP
+rst_deck \fI\,/path/to/history/HISTORY.DATA\/\fP rst/HISTORY:30 \fI\,/path/to/rst/RESTART\/\fP \fB\-s\fR
+.PP
+1: The program has a compiled list of keywords which will be retained in the
+.IP
+SOLUTION section. The current value of that list is: RPTRST

docs/man1/summary.1

@@ -1,5 +1,4 @@
-.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.8.
-.TH SUMMARY "1" "April 2021" "summary 2020.04" "User Commands"
+.TH SUMMARY "1" "October 2022" "summary 2022.10" "User Commands"
 .SH NAME
 summary \- Printer for summary keys in Eclipse summary files
 .SH DESCRIPTION
@@ -7,18 +6,10 @@ summary needs a minimum of two arguments. First is smspec filename and then list
 .PP
 In addition, the program takes these options (which must be given before the arguments):
 .PP
+.SH OPTIONS
 \fB\-h\fR Print help and exit.
+.TP
 \fB\-l\fR list all summary vectors.
+.TP
 \fB\-r\fR extract data only for report steps.
-.SH "SEE ALSO"
-The full documentation for
-.B summary
-is maintained as a Texinfo manual.  If the
-.B info
-and
-.B summary
-programs are properly installed at your site, the command
-.IP
-.B info summary
 .PP
-should give you access to the complete manual.

docs/tm/tm.tex

@@ -0,0 +1,27 @@
+\documentclass[a4paper,11pt]{book}
+\usepackage{verbatim}
+
+
+\newcommand{\kw}[1]{\texttt{#1}}
+\newcommand{\inlinecode}[1]{\texttt{#1}}
+\newcommand{\flow}[0]{\texttt{flow}}
+\newcommand{\eclipse}[0]{\texttt{Eclipse}}
+\newcommand{\path}[1]{\texttt{#1}}
+\newenvironment{deck}[0]{\verbatim}{\endverbatim}
+\newenvironment{code}[0]{\verbatim}{\endverbatim}
+
+\begin{document}
+
+\begin{titlepage}
+  \begin{center}
+    \Huge
+    \textbf{Technical manual}
+  \end{center}
+\end{titlepage}
+\tableofcontents
+
+\input{udq_actionx/udq}
+\input{udq_actionx/actionx}
+\input{udq_actionx/pyaction}
+
+\end{document}

docs/tm/udq_actionx/actionx.tex

@@ -0,0 +1,437 @@
+\newcommand{\actionx}{\kw{ACTIONX}}
+\chapter{Programming in the deck: \actionx}
+\label{actionx}
+The \actionx{} keyword is the most direct way to \emph{program} in the deck. The
+\actionx{} functionality consist of the \actionx{} keyword itself, with some
+metadata and a condition and then a list of keywords which are injected into the
+in-memory representation of the \kw{SCHEDULE} section at the point in time where
+the condition evaluates to true. The \actionx{} statement is evaluated at the
+end of every timestep, and if it evaluates to true the new keywords should take
+effect immediately. The \actionx{} conditions are less sophisticated than the
+expressions used in \udq{}, this implies that a common pattern is to make
+involved calculations as \udq{} expressions, and then use a simple test as
+\actionx{} condition.
+
+The \actionx{} keyword is also documented in section 12.3.6 in the \flow{}
+reference manual.
+
+\section{Structure of the \actionx{} keyword}
+\label{actionx_structure}
+The \actionx{} keyword itself consist of multiple records. The first record is
+metadata with name of the action, the number of times the action can be
+triggered and the minimum time elapsed before an action is eligible for a second
+run. The subsequent records are \emph{conditions}, all the conditions are of the
+same form
+\begin{code}
+  lhs comparison rhs
+\end{code}
+and subsequent conditions are combined with \inlinecode{AND} or \inlinecode{OR}.
+The \inlinecode{lhs} is a field, well or group quantity, in addition you can use
+time variables \kw{DAY}, \kw{MNTH} and \kw{YEAR} as left hand
+side\footnote{\eclipse{} supports a wider list of summary variables like region,
+block and aquifer quantities on both left and right hand side.}. As with the
+\udq{} variables the well and group variables are \emph{sets}, and the
+evaluation status is maintained individually for each well and group.
+
+The comparison is one of the ordinary mathematical comparison operators
+\inlinecode{>,<,=,!=, <=} and \inlinecode{>=}. Numerical comparisons are done
+with the corresponding plain C++ operators, this is in contrast to the \udq{}
+implementation where an epsilon defined in \kw{UDQPARAMS} is used in floating
+point comparisons.
+
+The \inlinecode{rhs} is a numerical scalar, or a field, well or group quantity.
+If your \inlinecode{rhs} is a well or group quantity the \inlinecode{lhs} and
+\inlinecode{rhs} must be of the same type. If you use the symbol \kw{MNTH} as
+\inlinecode{lhs} you can compare with named months, i.e. the following will
+trigger on leap days
+\begin{deck}
+ACTIONX
+  LEAP 1000 /
+  MNTH=FEB AND /
+  DAY=29 /
+/
+...
+...
+ENDACTIO
+\end{deck}
+When there is a well/group quantity as \inlinecode{lhs} the evaluation status is
+maintained individually for each well/group. The complete condition evaluates to
+true if \emph{any} of the wells/groups satisfy the condition. In the case of
+wells the wells matching the condition can subsequently be accessed with
+wellname '?' in the \kw{ACTIONX} keywords, this is a quite common pattern to
+e.g. close the well with highest watercut.
+
+If there are more conditions they must be joined with a trailing \kw{AND} or
+\kw{OR}, furthermore conditions can be grouped with paranthesis. The \actionx{}
+expressions can only contain the four arithmetic operators $+,-,*,/$ and not
+mathematical functions like $\log()$, for more advanced expressions the natural
+approach is to first define a \udq{} and then use the \udq{} symbol in the
+\actionx{}, this is illustrated in section \ref{uda}. When multiple conditions
+involving the same well set are evaluated, the list of matching wells available
+in '?' will contain all the wells from the final condition, i.e. for
+\begin{code}
+ WWCT = {"OP1": 0.25, "OP2": 0.50, "OP3": 0.75}
+\end{code}
+and the action
+\begin{deck}
+ACTIONX
+  WWCT /
+  WWCT > 0.33 AND /
+  WWCT < 0.66 /
+/
+...
+ENDACTIO
+\end{deck}
+the set of wells available for further use in '?' are \emph{all} the wells
+matching the condition \inlinecode{WWCT < 0.66} i.e. OP1 and OP2 and \emph{not}
+the wells matching the combined expression \inlinecode{0.33 < WWCT < 0.66}. In
+order to select wells in a range as attempted here you will have to create an
+indicator variable with \udq{} first and then select based on that indicator -
+e.g. something like
+\begin{deck}
+UDQ
+  DEFINE WUCTR (WWCT < 0.66) * (WWCT > 0.33) /
+/
+
+ACTIONX
+  WUCTR /
+  WUCTR = 1 /
+/
+
+...
+
+ENDACTIO
+\end{deck}
+
+The \actionx{} implementation is located in
+\path{opm/input/eclipse/Schedule/Action} and all the classes are in namespace
+\inlinecode{Action::}. As with the \udq{} the input parser needs some special
+case to handle '/' and '*' as division operator and multiplier respectively, but
+that is the only code shared between the \udq{} and the \actionx{}
+implementation\footnote{It might be possible to share more code between the two,
+in particular both have an internal recursive descent parser, but both \udq{}
+and \actionx{} have so much ``personality'' that at least initially separate
+implementations was the simplest.}.
+
+The condition part of the \actionx{} keyword is internalized while the
+\kw{SCHEDULE} section is parsed, the final product is maintained in a class
+\inlinecode{Action::ActionX} which has a \inlinecode{eval()} method waiting to
+be called. The keywords in the \actionx{} block are stored in the
+\inlinecode{Action::ActionX} keyword for future use. All of the \actionx{}
+keywords are stored in a container \inlinecode{Action::Actions} which will
+eventually manage the book keeping of which actions are eligible for evaluation.
+
+\section{The structure of the \inlinecode{Schedule} implementation}
+\label{schedule_design}
+\flow{} internalizes all keywords from the input deck and passes fully baked
+datastructures to the simulator, whereas our impression is that \eclipse{} works
+more like a reservoir model interepreter, executing one keywords at a time.
+Mostly the \flow{} approach has worked out well, however for the \actionx{}
+functionality the difference in execution model is quite acute, and the nature
+of the \actionx{} keyword has had quite strong influence on the final Schedule
+implementation. Although not required for use of \actionx{} it is valuable to
+understand how the \actionx{} functionality has influenced the design of the
+Schedule class, that way you will hopefully better understand problems or bugs
+which might arise in the future.
+
+At the very first pass the \kw{SCHEDULE} section is split in \emph{blocks}, with
+one block for each report step. The blocks are implemented with the class
+\inlinecode{ScheduleBlock}. Each block has a starting time and a list of
+keywords, the keywords are maintained in the input format
+\inlinecode{DeckKeyword}. Then the entire \kw{SCHEDULE} section is internalized
+in the class \inlinecode{ScheduleDeck} which essentially contains a list of
+\inlinecode{ScheduleBlock} instances. Consider the \kw{SCHEDULE} section
+\begin{deck}
+START
+  1 'JAN' 2020 /
+
+...
+...
+
+SCHEDULE
+
+WELSPECS
+	'PROD'	'G1'	10	10	8400	'OIL' /
+	'INJ'	'G1'	1	1	8335	'GAS' /
+/
+
+COMPDAT
+	'PROD'	10	10	3	3	'OPEN'	1*	1*	0.5 /
+	'INJ'	1	1	1	1	'OPEN'	1*	1*	0.5 /
+/
+
+-- End of block 0
+
+DATES
+   1 'FEB' 2020 /
+/
+
+WCONPROD
+	'PROD' 'OPEN' 'ORAT' 20000 4* 1000 /
+/
+
+WCONINJE
+	'INJ'	'GAS'	'OPEN'	'RATE'	100000 1* 9014 /
+/
+
+-- End of block 1
+
+DATES
+  1 'MAR' 2020 /
+/
+
+-- End of block 2
+END
+
+\end{deck}
+
+When this is internalized we get a \inlinecode{ScheduleDeck} instance with three
+\inlinecode{ScheduleBlock} values:
+
+\begin{code}
+ScheduleDeck sched_deck = [
+  ScheduleBlock {
+    start = "2020-01-01",
+    keywords = ["WELSPECS","COMPDAT"]
+  },
+  ScheduleBlock {
+    start = "2020-02-01",
+    keywords = ["WCONPROD","WCONINJE"]
+  },
+  ScheduleBlock {
+    start = "2020-03-01",
+    keywords = []
+  }
+]
+\end{code}
+
+The \inlinecode{Schedule} class has a \inlinecode{ScheduleDeck} member. The
+processed content of the \inlinecode{Schedule} class is managed in vector of
+\inlinecode{ScheduleState} instances, where one \inlinecode{ScheduleState}
+represents the complete dynamic input state at a particular report step. The
+processed \kw{SCHEDULE} code is created with the method
+\begin{code}
+  Schedule::iterateScheduleSection().
+\end{code}
+
+When \inlinecode{Schedule::iterateScheduleSection(report\_step)} is called it
+starts by clearing the vector of \inlinecode{ScheduleState} instances from
+\inlinecode{report\_step} to the end of the simulation, and then recreates those
+by treating the \inlinecode{ScheduleBlock}. The advantage of this approach is
+that the \inlinecode{Schedule::iterateScheduleSection(report\_step)} method is
+idempotent - it can be called repeatedly, from an arbitrary point in the
+timeseries.
+
+The implementation of the \actionx{} functionality is just to append the
+\actionx{} keywords in the \inlinecode{ScheduleBlock} instance corresponding to
+the current report step and then rerun the
+\inlinecode{Schedule::iterateScheduleSection()} from this report step.
+
+
+
+\section{Forward references of wells and groups}
+When a well or group is defined as an \actionx{} keyword and then
+unconditionally referenced in the deck we get a challenge at the first pass
+through the \kw{SCHEDULE} section. In the example below a new well \kw{W1} is
+defined with the \kw{WELSPECS} keyword when the action \inlinecode{NEW\_WELL}
+evaluates to true. At 1.st of January 2025 the well \kw{W1} is opened with the
+\kw{WCONPROD} keyword. The engineer making this model assumes that the
+\inlinecode{NEW\_WELL} action will evaluate to true sometime before 1.st of
+January 2025, and thereby ensure that the well is fully defined when it is
+eventually opened with \kw{WCONPROD}:
+\begin{deck}
+ACTIONX
+   'NEW_WELL/
+   WWCT OPX  > 0.75 /
+/
+
+WELSPECS
+  'W1'  'OP'  1 1 3.33  'OIL' 7*/
+/
+
+ENDACTIO
+
+TSTEP
+  10*30 /
+
+DATES
+   1 'JAN' 2025 /
+/
+
+WCONPROD
+ 'W1'      'OPEN'      'ORAT'      0.000      0.000      0.000  5* /
+/
+
+TSTEP
+  10*30 /
+
+\end{deck}
+
+For \flow{} this creates problems because the entire \kw{SCHEDULE} section is
+parsed when the simulator starts, and at first pass the well \kw{W1} is unknown
+in the \kw{WCONPROD} keyword. This is ``solved'' in the following way:
+\begin{enumerate}
+\item At first pass we inspect the keywords inside the \actionx{} block and if
+  we discover \kw{WELSPECS} we store the name of the well which will be defined
+  at a later stage through \actionx{}.
+\item When we parse further on as part of the first pass and said well is
+  referenced e.g. in a \kw{WCONPROD} keyword, we verify that the well will
+  eventually appear via \actionx{} - we issue a warning and ignore the well in
+  the \kw{WCONPROD} keyword\footnote{If the well is not registered as ``will
+  appear through \actionx{}'' there will be a runtime error with unknown well
+  name when parsing \kw{WCONPROD}.}.
+\item When the \actionx{} evaluates to true the well will be properly defined,
+  and when reiterating over the Schedule keywords the \kw{WCONPROD} keyword will
+  now be properly internalized. If the \actionx{} never evaluates to true the
+  \kw{WCONPROD} keyword will never be applied, and the warning from point 2 will
+  be the only trace of this well.
+\end{enumerate}
+It should be mentioned that the functionality with forward referencing of well
+names is quite new\footnote{In January 2022}, there might be well keywords in
+the \kw{SCHEDULE} section where the implementation is not yet prepared for this.
+Furthermore the forward referencing is not at all implemented for groups. The
+relevant data structure is the member \inlinecode{Action::WGNames
+  action\_wgnames} in the \inlinecode{Schedule} class.
+
+
+\section{To enable a new keyword for \actionx}
+The keywords must be explicitly enabled to be available in an \actionx{} block,
+and enabling a new keyword requires recompiling \flow{}. The keywords available
+as \actionx{} keywords are listed in the static method
+\inlinecode{ActionX::valid\_keyword()} in
+\path{opm/input/eclipse/Schedule/Action/ActionX.cpp}. In principle it should
+just be to add the keyword to the \inlinecode{ActionX::valid\_keyword()} method
+and rebuild \flow{}, but experience has unfortunately shown that problems of
+various kinds have had a tendency to pop up when new keywords are tried out as
+\actionx{} keywords. Most commonly the problems have been in the interaction
+between the \inlinecode{Schedule} class in opm-common and the simulator - things
+have a tendency to go out of sync.
+
+
+\section{Running \actionx{} during simulation}
+The first part of the \actionx{} treatment is parsing the keyword and conditions
+and assemble a syntax tree which can be used to evaluate the conditions. This
+parsing takes place when the \kw{SCHEDULE} section is parsed for the first time.
+This takes place fully within the realms of the opm-common codebase, and is
+quite mature.
+
+When the simulation actually runs the \actionx{} behavior consists of three
+distinct parts, taking place in the simulator, in opm-common and again in the
+simulator. The simulator will manage an instance of \inlinecode{Action::State}
+which will hold on to the time of last run and the latest results for the
+various actions.
+
+\subsection{Prepare and evaluate}
+As with \udq{} the \inlinecode{SummaryState} instance is the most important
+variable to provide context to the \actionx{} evaluation, i.e. the
+\inlinecode{SummaryState} variable must be evaluated before \actionx{}. In
+addition the \udq{} variables must be evaluated and available in the
+\inlinecode{SummaryState} instance before we invoke the \actionx{}
+functionality.
+
+The evaluation of actions is called from the method \inlinecode{applyActions()}
+in \path{eclproblem.hh}. The method will evaluate which actions are eligible for
+running by inspecting the \inlinecode{Action::Actions} variable and call the
+\inlinecode{ActionX::eval()} method.
+
+\subsection{Recreate \inlinecode{Schedule}}
+When an \actionx{} has evaluated to \inlinecode{true} the simulator will call
+into the opm-common method \inlinecode{Schedule::applyAction(report\_step)}.
+That function will add the keywords from the \actionx{} keyword to the
+\inlinecode{ScheduleBlock} for the correct report step, and then reiterate
+through the \kw{SCHEDULE} section to the end of the simulation.
+
+This reiterate process will recreate all internal members in the
+\inlinecode{Schedule} class, i.e. if the simulator was holding on to a reference
+to an internal \inlinecode{Schedule} datastructure that will be invalidated.
+
+While recreating the \inlinecode{Schedule} instance there is some book keeping
+as to which datastructures need to be recalculated in the simulator as a
+consequence of the \actionx{}. That information is maintained in the data
+structure \inlinecode{Action::SimulatorUpdate} which is returned back to the
+simulator.
+
+
+\subsection{Updating simulator data structures}
+The \actionx{} implementation is in the module opm-common, whereas when the
+simulation is proceeding it is the simulator code which is clearly in control.
+If an action has evaluated to true and new keywords are injected in the Schedule
+object the complete simulator state is updated. This is complex, and many of the
+bugs in \actionx{} functionality have been in the interaction between the
+simulator and opm-common, in particular when an action has evaluated to true.
+
+An assumption permeating the simulator code is that changes to the well and
+group configuration only take place at report steps, and in between those the
+simulator ``owns'' the well and group data. Unfortunately this is no longer the
+case when \actionx{} is active, and depending on the keywords in the \actionx{}
+block we need to update the simulator data structures after \actionx{} has been
+evaluated to true. Some details of what is currently updated is decsribed below.
+This update mechanism will probably need to be continously updated in the
+future.
+
+The simulator code makes \emph{copies} of many of the objects like wells and
+connections from the \inlinecode{Schedule} class, and also assembles many
+simulator specific data structures which to a large extent consist of extracts
+of information from the internals of the \inlinecode{Schedule} object. Some of
+the interaction between the simulator and the input layer could probably be
+simplified if the simulator would call the \inlinecode{Schedule} object when
+e.g. a well or connection is needed, instead of storing references or copies to
+the \inlinecode{Schedule} objects internally.
+
+There are currently three categories of changes that can take place due to
+\actionx{}:
+
+
+\subsubsection{General changes in well status}
+\label{actionx_change_well}
+When there is well related keyword in the \actionx{} block - e.g. \kw{WELOPEN}
+to open or close a well or \kw{WCONPROD} to adjust rates, the simulator is
+required update it's internal data structures with the updated input information.
+This will be communicated by flagging all the wells which need an update in the
+\inlinecode{Action::SimulatorUpdate} instance which is passed from the
+simulator.
+
+
+\subsubsection{Changes in geo properties}
+The grid keywords are in general not permitted in the \kw{SCHEDULE} section,
+however there are a few geo multipliers like \kw{MULTZ} and \kw{MULTFLT} which
+are allowed in the \kw{SCHEDULE} section, and thereby also in \actionx{}. If one
+of these keywords are encountered in the \actionx{} block we set the flag
+\inlinecode{Action::SimulatorUpdate::tran\_update = true} to encourage the
+simulator to recalculate the transmissibilities.
+
+
+\subsubsection{WELPI}
+\label{actionx_welpi}
+The \kw{WELPI} keyword is quite complex from the outset, when it is included as
+an \actionx{} keyword it gets even more complicated. In order to support
+\kw{WELPI} in \actionx{} the simulator needs to inspect the \actionx{} keywords
+before invoking them, and if \kw{WELPI} is included the PI values must be
+assembled from the simulator and passed to the
+\inlinecode{Schedule::applyAction()}. This is implemented and works, but it is
+complex and the special treatment in order to support the combination \kw{WELPI}
++ \actionx{} is quite considerable.
+
+
+\section{Problems in parallel}
+\label{actionx_paralle}
+The operation environment for \actionx{} is quite similar to \udq{} when it
+comes to parallel behavior - see section \ref{udq_parallel}, in addition we
+need to be aware of parallel challenges after the \actionx{} has completed. If
+the \actionx{} keyword changes the well structure there will be problems with
+with the parallel well distribution in the simulator. \emph{As of Januarry 2022
+this will fail undetected.}
+
+
+\section{\actionx{} restart output}
+As with the \udq{} keyword some of the structure and complexity of the
+\actionx{} datastructures are there primarily to enable \eclipse{} compatible
+restart. Regarding restart of \actionx{} related data:
+\begin{enumerate}
+  \item The restart output contains the result of parsing an \actionx{}
+    condition in an intermediate representation which has been reverse
+    engineered, this is complex and might not be 100\% correct.
+  \item When restarting \flow{} from an \eclipse{} formatted restart file the
+    \actionx{} conditions are reparsed based on string data in the restart file
+    and the intermediate representation mentioned in point 1 is not utilised.
+\end{enumerate}

docs/tm/udq_actionx/pyaction.tex

@@ -0,0 +1,405 @@
+\newcommand{\pyaction}{\kw{PYACTION}}
+\chapter{Programming in the deck: \pyaction{}}
+\label{pyaction}
+The \pyaction{} keyword is a \flow{} specific keyword which allows for Python
+programming in the \kw{SCHEDULE} section. The \pyaction{} keyword is inspired by
+the \actionx{} keyword, but instead of a \inlinecode{.DATA} formatted condition
+you are allowed to implement the condition with a general Python script. The
+\actionx{} keywords are very clearly separated in a condition part and an action
+part in the form of a list of keywords which are effectively injected in the
+\kw{SCHEDULE} section when the condition evaluates to true. This is not so for
+\pyaction{} where there is only one Python script which can both evaluate
+conditions and apply changes. In principle the script can run arbitrary code,
+but due to the complexity of the \kw{SCHEDULE} datamodel the ``current best''
+way to actually change the course of the simulation is through the use of an
+additional dummy \actionx{} keyword.
+
+In order to enable the \pyaction{} keyword \flow{} must be compiled with the
+\path{cmake} switches \inlinecode{-DOPM\_ENABLE\_EMBEDDED\_PYTHON=ON} and
+\inlinecode{-DOPM\_ENABLE\_PYTHON=ON}, the default is to build with these switches
+set to \inlinecode{OFF}. Before you enable \pyaction{} in your \flow{}
+installation please read carefully through section \ref{pyaction_security} for
+security implications of \pyaction{}.
+
+\section{Python - wrapping and embedding}
+Python is present in the \flow{} codebase in two different ways. For many of
+the classes in the \flow{} codebase - in particular in opm-common, there are
+\emph{Python wrappers} available. That means that you can invoke the C++
+functionality in \flow{} classes from Python - e.g. this Python script can be used to
+load a deck and print all the keywords:
+
+\begin{code}
+import sys
+from opm.io.parser import Parser
+
+input_file = sys.argv[1]
+parser = Parser()
+
+deck = parser.parse_file(input_file)
+for kw in deck:
+    print(kw.name)
+\end{code}
+ 
+When used this way the Python interpreter is the main program running, and the
+\flow{} classes like \inlinecode{Opm::Parser} are loaded to extend the Python
+interpreter. This can also be flipped around, the Python interpreter can be
+\emph{embedded} in the \flow{} executable. When Python is embedded, \flow{} is
+the main program running, and with help of the embedded interpreter the \flow{}
+program can be extended with Python plugins. The \pyaction{} keyword can be
+perceived as a Python plugin. To really interact with the state of the \flow{}
+simulation the plugin needs to utilize the functionality which wraps the C++
+functionality, so for \pyaction{} both wrapping and embedding is at play.
+
+Exporting more functionality from C++ to Python in the form of new and updated
+wrappers is a quite simple and mechanical process. If you need a particular
+functionality which is already available in C++ also in Python it will probably
+be a quite limited effort for a developer who is already familiar with the code.
+
+
+\section{The \pyaction{} keyword}
+The \pyaction{} keyword is in the \kw{SCHEDULE} section like \actionx{}. The
+first record is the name of the action and a string identifier for how many
+times the action should run, then there is a path to a Python module:
+
+\begin{deck}
+PYACTION
+  PYTEST 'FIRST_TRUE' /
+  'pytest.py' /
+\end{deck}
+
+This keyword defines a \pyaction{} called \kw{PYTEST} which will run at the end
+of every timestep until the first time a \inlinecode{true} value is returned. In
+addition to \kw{FIRST\_TRUE} you can choose \kw{SINGLE} to run exactly once and
+\kw{UNLIMITED} to continue running at the end of every timestep for the entire
+simulation. The second record is the path to a file with Python code which will
+run when this \pyaction{} is invoked. The path to the module will be interpreted
+relative to the location of the \path{.DATA} file.
+
+The python module can be quite arbitrary, but it must contain a function
+\inlinecode{run} with the correct signature:
+\begin{code}
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    print('Running python code in PYACTION')
+    return True
+\end{code}
+The \pyaction{} machinery is not as robust as the simulator proper: while
+loading the \kw{PYACTION} keyword \flow{} will check that the Python module
+contains syntactically valid Python code, and that it contains a
+\inlinecode{run()} function, but it will \emph{not} check the signature of the
+\inlinecode{run()} function. If the signature is wrong you will get a hard to
+diagnose runtime error.
+
+When the Python module is loaded it does so in an environment where the path to
+the \path{.DATA} file has been appended to the Python load path by manipulating
+the internal \inlinecode{sys.path} variable.
+
+ 
+\subsection{The different arguments}
+The \inlinecode{run()} function will be called with exactly five arguments which
+your implementation can use. These arguments point to datastructures in the
+simulator, and is the way to interact with the state of the simulation. The five
+arguments are:
+\begin{description}
+\item[\inlinecode{ecl\_state}:] An instance of the \inlinecode{Opm::EclipseState}
+  class - this is a representation of \emph{all static properties} in the model,
+  ranging from porosity to relperm tables. The content of the
+  \inlinecode{ecl\_state} is immutable - you are not allowed to change the static
+  properties at runtime\footnote{This could certainly be interesting, but this
+  is beyond the scope of the \pyaction{} keyword.}.
+\item[\inlinecode{schedule}:] An instance of the \inlinecode{Opm::Schedule}
+  class - this is a representation of all the content from the \kw{SCHEDULE}
+  section, notably all well and group information and the timestepping. Being
+  able to change the \kw{SCHEDULE} information runtime is certainly one of the
+  main motivations for this functionality, however due to the complexity of
+  the \inlinecode{Opm::Schedule} class (section \ref{schedule_design})
+  the recommended way to actually mutate the \inlinecode{Opm::Schedule} is
+  through the use of a dummy \actionx{} keyword (section
+  \ref{pyaction_actionx}).
+\item[\inlinecode{report\_step}:] This is an integer for the report step we
+  are currently working on. Observe that the \pyaction{} is called for every
+  simulator timestep, i.e. it will typically be called multiple times with
+  the same value for the $\mathrm{report\_step}$ argument.
+\item[\inlinecode{summary\_state}:] An instance of the
+  \inlinecode{Opm::SummaryState} class, this is where the current summary
+  results of the simulator are stored. The \inlinecode{SummaryState} class has
+  methods to get hold of well, group and general variables
+  \begin{code}
+    # Print all well names
+    for well in summary_state.wells:
+        print(well)
+
+    # Assign all group names to the variable group_names
+    group_names = summary_state.groups
+
+    # Sum the oil rate from all wells.
+    sum_wopr = 0
+    for well in summary_state.wells:
+        sum_wopr += summary_state.well_var(well, 'WOPR')
+
+    # Directly fetch the FOPR from the summary_state
+    fopr = summary_state['FOPR'] 
+  \end{code}
+  The \inlinecode{summary\_state} variable can also be updated with the
+  \inlinecode{update()}, \inlinecode{update\_well\_var()} and
+  \inlinecode{update\_group\_var()} methods.
+\item[\inlinecode{actionx\_callback}:] The \inlinecode{actionx\_callback} is a
+  specialized function which is used to update the \inlinecode{Schedule} object
+  by applying the keywords from a normal \actionx{} keyword. This is described
+  in detail in section \ref{pyaction_actionx}.
+\end{description}
+
+\subsection{Holding state}
+The \pyaction{} keywords will often be invoked multiple times, a Python
+dictionary \inlinecode{state} has been injected in the module - that dictionary
+can be used to maintain state between invocations. Let us assume we want to
+detect when the field oil production starts curving down - i.e. when
+$\partial^2_{t} \mathrm{FOPR} < 0$, in order to calculate that we need to keep
+track of the timesteps and the $\mathrm{FOPR}$ as function of time - this is one
+possible implementation:
+\begin{code}
+def diff(pair1, pair2):
+    return (pair1[0] - pair2[0], pair1[1] - pair2[1])   
+
+def fopr_diff2(summary_state):
+    fopr = summary_state.get('FOPR')
+    sim_time = summary_state.get('TIME')
+    if not 'fopr' in state:
+        state['fopr'] = []
+    fopr_series = state['fopr']
+    fopr_series.append( (sim_time, fopr) )
+
+    if len(fopr_series) < 2:
+       return None
+
+    pair0 = fopr_series[-1]
+    pair1 = fopr_series[-2]
+    pair2 = fopr_series[-3]
+
+    dt1, df1 = diff(pair0, pair1)
+    dt2, df2 = diff(pair1, pair2)
+
+    return 2*(df1/dt1 - df2/dt2)/(dt1 + dt2)
+
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    fopr_d2 = fopr_diff2(summary_state)
+    if not fopr_d2 is None:
+       if fopr_d2 < 0:
+           print('Hmmm - this is going the wrong way')
+       else:
+           print('All good - sky is the limit!')
+\end{code}
+
+\section{Changing the \inlinecode{Schedule} object - using a ``normal'' \actionx{}}
+\label{pyaction_actionx}
+Before reading this section you should make sure to understand the
+\inlinecode{Schedule} design described in section \ref{schedule_design}. The
+initial plan when implementing the \pyaction{} keyword was to be able to make
+function calls like
+\begin{code}
+  schedule.close_well(w1, report_step)
+  schedule.set_orat(w2, 1000, report_step)
+\end{code}
+to close a well and set the oil rate of another well. Unfortunately it proved
+very complex to get good semantics for combining such runtime changes with the
+keyword based model for \kw{SCHEDULE} section. The current recommendation is to
+apply changes to the \kw{SCHEDULE} section using callbacks to \kw{ACTIONX}
+keywords from Python code, this is illustrated in the example
+below\footnote{From a programmers point of view the solution seems very
+unsatisfactory, but it works and it plays nicely with the \kw{ACTIONX} behavior.
+If/when the underlying \inlinecode{Schedule} implementation changes there is
+nothing per se in the \pyaction{} design which inhibits use of a better
+\inlinecode{Schedule} api in the future.}.
+
+The recommended way to achieve this is to create a normal \actionx{} keyword
+which is set up to run zero times, and then explicitly invoke that from the
+Python \inlinecode{run()} function. In the example below we create an \actionx{}
+\inlinecode{CLOSEWELLS} which will close all matching wells (the wellname '?')
+\begin{deck}
+ACTIONX
+  CLOSEWELLS 0 /
+  /
+/
+
+WELOPEN
+  '?' 'CLOSE' /
+/
+
+ENDACTIO
+\end{deck}
+The \inlinecode{CLOSEWELLS} action is set up to run zero times, so the normal
+\actionx{} machinery will never run this action\footnote{The \kw{CLOSEWELL}
+action has an \emph{empty condition}, the \actionx{} keywords with empty
+condition will always evaluate as false.}. Then in the Python run function we go
+through all the wells and call the \inlinecode{CLOSEWELL} action to close those
+with \inlinecode{OPR < 1000}:
+\begin{code}
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    close_wells = []
+    for well in summary_state.wells:
+        if summary_state.well_var(well, 'WOPR') < 1000:
+           close_wells.append(well)
+
+    if close_wells:
+        actionx_callback('CLOSEWELLS', close_wells)
+\end{code}
+The implementation of this is quite complex with thread of execution going from
+C++ to Python, then invoking a callback to C++ which will call
+\inlinecode{Schedule::iterateScheduleSection()}, going back to Python to
+complete the \inlinecode{run()} method before the function pointers pops back to
+C++ and continues the simulator execution\footnote{This is documented in some
+detail as code comments of \inlinecode{Schedule::applyPyAction()} in the
+\path{Schedule.cpp} file.}.
+
+
+\section{Implementing \udq{} like behavior}
+The \udq{} keyword has three different purposes - all based on defining 
+complex quantities from the current state of the simulation:
+
+\begin{enumerate}
+\item Define a complex quantity to be used in a \actionx{} condition.
+\item Define a complex quantity for reporting in the summary file.
+\item Define a quantity which can used as a control in \kw{UDA}.
+\end{enumerate}
+
+All of these can be achieved by using the \pyaction{} keyword, although for the
+two latter alternatives you must specify the \udq{} keyword in the deck first,
+but you can let the \pyaction{} implementation override the value:
+\begin{deck}
+-- Observe that this UDQ will be assigned from a PYACTION keyword,
+-- the value used in the ASSIGN statement below is pure dummy.
+UDQ
+  ASSIGN WUGOOD 1 /
+  ASSIGN FUGOOD 1 /
+/
+\end{deck}
+
+\subsection{Using \pyaction{} instead of \udq{} + \actionx{}}
+Towards the end of section \ref{actionx_structure} it is demonstrated how \udq{}
+and \actionx{} can be combined to implement an action in case a complicated
+condition applies. As described in section \ref{pyaction_actionx} the best way
+to actually invoke changes on the \kw{SCHEDULE} section is through the use of a
+dummy \actionx{} keyword, but \pyaction{} is very well suited to evaluate
+complex conditions. In the example below we close all wells which have
+consistently produced less than 1000 $\mathrm{m^3/day}$ for more than 60 days:
+
+\begin{code}
+wopr_limit = 1000
+time_limit = 60 * 3600 * 24
+
+def init_state(summary_state):
+    if 'closed_wells' in state:
+        return
+
+    state['closed_wells'] = set()
+    bad_wells = {}
+    for well in summary_state.wells:
+        bad_wells[well] = None
+    state['bad_wells'] = bad_wells
+
+
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    shut_wells = []
+    init_state(summary_state)
+    for well in summary_state.wells:
+        if well in state['closed_wells']:
+           continue
+
+        if summary_state.well_var(well, 'WOPR') < wopr_limit:
+            elapsed = summary_state.elapsed()
+            if state['bad_wells'][well] is None:
+                state['bad_wells'][well] = elapsed
+            else:
+                bad_time = elapsed - state['bad_wells'][well]
+                if bad_time > time_limit:
+                    shut_wells.append(well)
+                    state['closed_wells'].add( well )         
+        else:
+            state['bad_wells'][well] = None
+
+    if shut_wells:
+       actionx_callback(shut_wells)
+
+\end{code}
+
+\subsection{Using \pyaction{} to report to the summary file}
+The important point when using \pyaction{} to report complex results to the
+summary file is just that the \inlinecode{summary\_state} argument to the
+\inlinecode{run()} function is \emph{writable} with \inlinecode{updata\_xxx}
+calls. Assuming dummy \udq{} variables \kw{WUGOOD} and \kw{FUGOOD} have been
+defined as per the example above, we can use \pyaction{} to set variable
+\kw{FUGOOD} to one for all wells with rate above a limit, and the \kw{FUGOOD}
+variable can be the count of such wells:
+\begin{code}
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    good_count = 0
+    opr_limit = 1000
+    for wname in schedule.well_names():
+        if summary_state.well_var(wname, 'FOPR') > opr_limit:
+            good_count += 1
+            summary_state.update_well_var(wname, 'WUGOOD', 1)
+        else:
+            summary_state.update_well_var(wname, 'WUGOOD', 0)
+
+    summary_state.update_var('FUGOOD', good_count)
+\end{code}
+
+
+
+\subsection{Using \pyaction{} to set a \kw{UDA} control}
+Using \pyaction{} to set \kw{UDA} controls is quite simple. Again the \udq{}
+keyword must have been defined with a dummy value in the \kw{SCHEDULE} section,
+and the \kw{UDA} keyword used in e.g. a \kw{WCONDPROD} keyword. Then the
+\inlinecode{run()} function can just be used to assign to the \udq{} variable.
+In the example below we use a \kw{UDA} to control the oil production rate, and
+the value is set to the average value of the producing wells:
+\begin{deck}
+-- Define dummy UDQ WUOPR to be used as control in the WCONPROD
+-- keyword. The actual value for this UDQ is assigned in a PYACTION
+-- keyword
+UDQ
+   ASSIGN WUOPR 0 /
+/
+...
+...
+-- Need to define a well list with all the production wells.
+-- This is to ensure that the WCONPROD keyword is only applied
+-- to producers.
+WLIST
+  'PROD'  P1 P2 P3 .../
+
+WCONPROD
+   '*PROD'  'OPEN'  'ORAT'  'WUOPR' /
+/
+\end{deck}
+This can then be combined with the python code:
+\begin{code}
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    num_prod_wells = 0
+    for wname in schedule.well_names():
+        if summary_state.well_var(wname, 'WOPR') > 0:
+            num_prod_wells += 1
+ 
+    fopr = summary_state['FOPR']
+    new_rate = fopr / num_prod_wells
+    for wname in schedule.well_names():
+        summary_state.update_well_var(wname, 'WUOPR', new_rate)
+\end{code}
+
+
+\section{Security implications of \pyaction{}}
+\label{pyaction_security}
+The \pyaction{} keyword allows for execution of arbitrary user supplied Python
+code, with the priviliges of the user actually running \flow{}. If you have a
+setup where \flow{} runs with a different user account than the person
+submitting the simulation you should be \emph{very careful} about enabling the
+embedded Python functionality and the \pyaction{} keyword. As a scary example
+this script will wipe your disks:
+\begin{code}
+import shutil
+
+def run(ecl_state, schedule, report_step, summary_state, actionx_callback):
+    shutil.rmtree('/')
+\end{code}
+
+If the user running \flow{} has different security credentials than the user
+submits the job, this has significant security implications.

docs/tm/udq_actionx/udq.tex

@@ -0,0 +1,599 @@
+\newcommand{\udq}{\kw{UDQ}}
+\chapter{Programming in the deck: \udq{}}
+\udq{} and \kw{ACTIONX} are two keywords which offer a sort of
+\emph{programming} in the input deck. \udq{} is an acronym for \emph{User
+Defined Quantity}, and the essence of the \udq{} keyword is the ability to
+define arithmetic expressions based on the result vectors of the ongoing
+simulation. The quantites evaluated with \udq{} can then be output as summary
+variables, and they can be used as controls in keywords like \kw{WCONPROD} and
+\kw{GCONINJE}. When used as controls the \udq{} variables are called \emph{User
+Defined Arguments} (UDA).
+
+For both the \udq{} and \kw{ACTIONX} keywords evaluating an arithmetic
+expression based on the current results of the ongoing simulation is an
+important part of the concept, and they are often referenced in pair as
+\udq{}/\kw{ACTIONX}, this is slightly misleading as the two are fully
+independent and share very little both as concepts in \flow{} and in the C++
+implementation. The \kw{ACTIONX} keyword is described in chapter \ref{actionx}. 
+
+The \udq{} keyword is also documented in section 12.3.233 in the \flow{}
+reference manual.
+
+\section{Defining a new \udq{} keyword}
+New \udq{} variables are defined with the \udq{} keyword in the \kw{SCHEDULE}
+section. The \udq{} keyword is a sort of a super keyword with four additional
+subcommands: \kw{DEFINE}, \kw{ASSIGN}, \kw{UNIT} and \kw{UPDATE}. The
+\kw{DEFINE} subcommand is the most important command, that is used to
+\emph{define} an arithmetic expression for a \udq{} variable, which is evaluated
+at the end of every simulator time step. \kw{ASSIGN} is used to define a \udq{}
+variable with a constant numerical value, in addition the \kw{ASSIGN} subcommand
+is often used as a ``forward reference'' to enable using a \udq{} keyword in
+another \kw{DEFINE} expression. The \kw{UNIT} command is used to assign a unit
+string to a \udq{} variable, see section \ref{udq_units} for more details about
+\udq{} variables and units. The \kw{UPDATE ON} and \kw{UPDATE OFF} commands can
+be used to switch updating of \udq{} variables on and off. The \udq{} variables
+are created in mode \kw{ON}.
+
+All \udq{} keywords must have the letter \emph{U} as their second character, the
+first character should be 'F', 'G' or 'W' to indicate whether this is a field,
+group or well quantity\footnote{In \eclipse{} also the characters 'S', 'C', 'A'
+and 'B' are used to denote \emph{segment}, \emph{connection}  \emph{aquifer} and
+\emph{block} variables respectively. None of these are supported in \flow{}.}.
+
+The simplest way to define a \udq{} is just using the \kw{ASSIGN} subcommand of
+the \udq{} keyword:
+\begin{deck}
+UDQ
+  ASSIGN FUVAR1 123 /
+  ASSIGN FUVAR2 456 /
+/
+\end{deck}
+This way we will assign to variables \inlinecode{FUVAR1} and \inlinecode{FUVAR2}
+with values 123 and 456 respectively. These values can output to the summary
+file, be used as control values in a control keyword like \kw{WELTARG} and be
+used to recursively define another \udq{} keyword.
+
+The more interesting \udq{} subcommand is \kw{DEFINE} which is used to define an
+arithmetic expression for a \udq{} variable, the arithmetic expression will be
+evaluated at the end of every timestep. The expressions are built from the
+normal arithmetic operators +,-,*,/, a predefined set of available functions
+(see \ref{udq_functions}) and results from the ongoing simulation.
+
+In the example below we create \udq{} variables \kw{FUWCT1} and \kw{FUWCT2} as
+user defined field water cut, one based on the summary variables \kw{FWPR} and
+\kw{FOPR} and one based on summing \kw{WOPR} and \kw{WWPR} over all wells
+\begin{deck}
+UDQ
+  DEFINE FUWCT1 FWPR/(FWPR + FOPR) /
+  DEFINE FUWCT2 SUM(WWPR)/(SUM(WWPR) + SUM(WOPR)) /
+/
+\end{deck}
+
+A \udq{} variable can be redefined during the simulation, and also change from
+constant \kw{ASSIGN} to variable \kw{DEFINE}. Observe that \udq{} values are
+always evaluated in order of occurence in the input deck. For instance for this
+input
+\begin{deck}
+UDQ
+  ASSIGN FU1 100 /
+  DEFINE FU2 FU1 + FOPR /
+  DEFINE FU1 FWPR /
+/
+\end{deck}
+the evaluation order will be \{\kw{FU1}, \kw{FU2}\}\footnote{Maintaining the
+input order and whether a certain \udq{} symbol is now a \kw{ASSIGN} or
+\kw{DEFINE} keyword is also very important for the restart code.}. \kw{ASSIGN}
+statements take effect at input time, making the newly defined symbol
+immediately available for reuse in a subsequent defintion. This is utilized in
+the \udq{} keyword above where the symbol \kw{FU1} is referenced in the
+defintion of \kw{FU2}. As used in this example the \kw{ASSIGN FU1 100} can be
+seen as a \emph{forward reference}. When we have completed the first timestep
+and it is time to evalute the \udq{} expressions they will be evaluated in order
+of \emph{first appearance}, i.e. \{\kw{FU1}, \kw{FU2}\}. At this stage the
+active definition of \kw{FU1} is \inlinecode{FU1 = FWPR}, i.e. the value
+\inlinecode{100} from the initial definition \inlinecode{FU1 = 100} is never
+actually used.
+
+\section{Different types of \udq{} - field, group and well}
+The \udq{} keywords can be of different types, \flow{} supports \emph{field},
+\emph{well} and \emph{group} keywords\footnote{\eclipse{} also supports
+connection, segment and aquifer variables.}. The field keywords are scalar,
+whereas the well and group keywords are sets with values for every well/group.
+
+The type of a \udq{} keyword is inferred from the name in the same manner as the
+summary keywords, i.e. for this \udq{} keyword
+\begin{deck}
+UDQ
+  ASSIGN FU1 100 /
+  ASSIGN WU1 200 /
+  ASSIGN GU1 300 /
+/
+\end{deck}
+we will define one scalar keyword \kw{FU1}, one well set \kw{WU1} and one group
+set \kw{GU1}. The well sets will have one slot for each well in the model, it is
+not possible to create a well set with only a subset of wells, but the well set
+can have \emph{undefined} value for a subset of wells. The set maintains a
+\inlinecode{is\_defined()} status for each element and most operations only
+apply to the defined elements\footnote{The C++ implementation of the \udq{}
+value set is the equivalent of \texttt{std::map<std::string,
+  std::optional<double>>}.}.
+
+As indicated with \kw{ASSIGN WU1 200} you can assign a scalar value to a set
+keyword, then all elements in the set will have the same value. Assuming we have
+a model with wells OP1, OP2, WI and GI the \kw{WU1} will look like
+\begin{code}
+  WU1 = {"OP1": 100, "OP2": 100, "WI": 100, "GI": 100}.
+\end{code}
+When defining a well \udq{} it is natural to refer to well summary variables, in
+the example below we define \kw{WUBHP} which is the bottom hole pressure
+for each well, \kw{WUOPR1} which is the oil production rate for a subset of
+wells and \kw{WUOPR2} which is the oil production rate for well OP1 \emph{broadcasted to all wells}.
+\begin{deck}
+UDQ
+  DEFINE WUBHP  WBHP     / 
+  DEFINE WUOPR1 WOPR 'OP*' /
+  DEFINE WUOPR2 WOPR OP1 /
+/
+\end{deck}
+After evaluation these \udq{} values will be\footnote{The numerical values are
+arbitrary, just to illustrate that they are \emph{defined}, in contrast to the
+[ ] which is used to illustrate an \emph{undefined} value.}:
+\begin{code}
+  WUBHP  = {"OP1": 20, "OP2": 30, "WI": 10,  "GI": 15}
+  WUOPR1 = {"OP1": 13, "OP2": 17, "WI": [ ], "GI": [ ]}
+  WUOPR2 = {"OP1": 13, "OP2": 13, "WI": 13,  "GI": 13}
+\end{code}
+Observe how well variables like \kw{WBHP} and \kw{WOPR} can be qualified with a
+wellname pattern. If no wellname is supplied the expression will be evaluated
+for all wells, as for \kw{WUBHP}, for \kw{WUOPR1} the pattern 'OP*' will select
+wells \{OP1, OP2\} and leave the injectors \{WI, GI\} undefined. For \kw{WUOPR2}
+the well pattern 'OP1' specifies a well completely, i.e. this will be evaluated
+as a scalar, and then the scalar value \inlinecode{WOPR:OP1 == 13} is
+broadcasted to all the wells in \kw{WUOPR2}.
+
+\udq{} sets with different sets of defined wells can be combined, in most cases
+the operations will be applied to the intersection of all defined wells,
+consider for example\label{udq_diff}:
+
+\begin{deck}
+UDQ
+  DEFINE WUBHP    WBHP /
+  DEFINE WUTHP    WTHP OP* /
+  DEFINE WUPDIFF  WUBHP - WUTHP
+/
+\end{deck}
+When these \udq{} statements are evaluated we will get:
+\begin{code}
+  WUBHP   = {"OP1": 20, "OP2": 30, "WI": 10,  "GI": 15}
+  WUTHP   = {"OP1": 13, "OP2": 17, "WI": [ ], "GI": [ ]}
+  WUPDIFF = {"OP1":  7, "OP2": 13, "WI": [ ], "GI": [ ]}
+\end{code}
+As we see the undefined property for wells GI and WI in \kw{WUTHP} is contagious
+when the two expressions are combined with \inlinecode{WUPDIFF = WUBHP - WUTHP},
+see however section \ref{udq_union_functions} for a collection of functions
+which operate on the union of values.
+
+When an undefined variable is output to the summary file it will get a value
+given as item 3 of the \kw{UDQPARAM} keyword. Summary output is the \emph{only}
+point where the undefined value can be dereferenced, the numerical value given
+in \kw{UDQPARAM} will not be available either for \udq{} nor \kw{ACTIONX}
+evaluations.
+
+
+\section{Functions available in \udq{} defintions}
+\label{udq_functions}
+\flow{} supports all the \udq{} functions available in \eclipse{}, for the
+future it would be a quite simple C++ task to extend the list of available
+functions, although that will affect \eclipse{} compatibility.
+
+\subsection{Ordinary binary functions}
+The \udq{} framework supports all the ordinary arithmetic operators +,-,*,/ and
+\^{} and the comparison operators $>, \ge, <, \le, \ne, ==$. For all of these
+operations sets and scalars can be combined freely. When combining a scalar and
+a set the scalar will be promoted to a set with all values equal, i.e. for
+\begin{deck}
+UDQ
+  ASSIGN WULIMIT 100 /
+/
+\end{deck}
+the numerical value 100 will be broadcasted to all wells:
+\begin{code}
+  WULIMIT = {"OP1": 100, "OP2": 100, "WI": 100,  "GI": 100}.
+\end{code}
+
+In the case of set arguments the operations are only applied to the union of
+values which are defined in both argument sets. The comparison operators produce
+numerical 0 or 1 depending on the result of the comparison, the result from a
+comparison operation can be used numerically in further computations. In the
+following example \kw{FUWCNT} will be the number of wells producing with oil
+production rate above 1000\footnote{Remember: 1000 has the units of the
+deck, i.e. $\mathrm{stb/day}$ in FIELD units and $\mathrm{m^3/day}$ in metric
+units.}.
+\begin{deck}
+UDQ
+  DEFINE FUWCNT SUM( WOPR > 1000 ) /
+/
+\end{deck}
+
+
+
+\subsection{Functions over a set returning a scalar}
+The \udq{} framework has several functions which iterate over all the defined
+members of a set and return a scalar. In the example
+
+\begin{deck}
+UDQ
+  DEFINE FU1 SUM(WOPR 'OP*') /
+/
+\end{deck}
+The scalar variable \kw{FU1} will be equal to the sum of oil production rates
+for all wells matching the pattern \kw{OP*}, the wells with a name not matching
+\kw{OP*} will not contribute to the sum. The complete list of functions iterating
+over a set and returning a scalar are:
+
+\begin{description}
+\item[SUM] Sum all defined elements in the argument set and return a scalar.
+\item[AVEA] The arithmetic average of the elements in the set.
+\item[AVEG] The geometric average of the elements in the set.
+\item[AVEH] The harmonic average of the elements in the set.
+\item[MAX] The maximum element in the set.
+\item[MIN] The minimum element in the set.
+\item[NORM1] The $\mathrm{L^1}$ norm of the elements in the set.
+\item[NORM2] The $\mathrm{L^2}$ norm of the elements in the set.
+\item[NORMI] The $\mathrm{L^\infty}$ norm of the elements in the set.
+\item[PROD] The product of all the elements in the set.
+\end{description}
+
+
+\subsection{Elemental functions}
+There is a family of functions which take a vector or scalar as argument, run
+through  all the elements in the argument and return a result of the same shape
+as the argument, where a function has been applied to all the defined elements.
+Assume that the \kw{WU1} has the following value:
+
+\begin{code}
+  WU1 = {"OP1": -2, "OP2": -1, "WI": 1, "GI": []},
+\end{code}
+
+then \kw{DEFINE WUABS ABS(WU1)} will give
+
+\begin{code}
+  WUABS = {"OP1": 2, "OP2": 1, "WI": 1, "GI": []}.
+\end{code}
+
+The available elemental functions of this kind come in different categories:
+
+\subsubsection*{Mathematical functions}
+\begin{description}
+\item[EXP] Return a new set where all defined elements have been exponentiated.
+\item[ABS] Return a new set with the absolute value of all elements.
+\item[LN] Return a new set with the \emph{natural logarithm} of all elements.
+\item[LOG] Return a new set with $\log_{10}$ of all elements.
+\item[NINT] Return a new set where all elements have been converted to the
+  nearest integer.
+\end{description}
+
+\subsubsection*{Sorting functions}
+The \udq{} functionality supports functions \kw{SORTA} and \kw{SORTD} to sort a
+set in ascending or descending order respectively. Observe that these functions
+do not sort the sets in place - the udqset does not have any notion of ordering,
+rather they create a permutation set with values 1,2,3, ... The following
+combination of \udq{} and \kw{ACTIONX} will use the \kw{SORTD} function to close
+the two wells with the highest watercut:
+\begin{deck}
+UDQ
+  DEFINE WUWCTS SORTD(WWCT OP*) /
+/
+\end{deck}
+assuming the \kw{WWCT} looks like
+\begin{code}
+  WWCT = {"OP1": 0.5, "OP2": 0.2, "OP3": 0.1, "OP4":0.7, "WI": 0, "GI": 0}
+\end{code}
+then the \kw{WUWCTS} set will look like
+\begin{code}
+  WUWCTS = {"OP1": 2, "OP2": 3, "OP3": 4, "OP4":1 "WI": [], "GI": []}
+\end{code}
+
+When this is combined with the \kw{ACTIONX}(see chapter \ref{actionx})
+\begin{code}
+ACTIONX
+CW /
+WUWCTS <= 2 /
+/
+
+WELOPEN
+'?'  'CLOSE' /
+/
+
+ENDACTIO
+\end{code}
+the two wells with highest watercut will be selected in the \inlinecode{WUWCTS
+  <= 2} statement and that will be expanded to \{OP4, OP1\} by the '?'
+expression in the \kw{WELOPEN} keyword.
+
+
+\subsubsection*{Random functions}
+The \udq{} machinery has functionality to sample random numbers, there are one
+set of random number functions which are seeded deterministically by item 1 of
+\kw{UDQPARAMS} and an alternative set which is seeded by the clock. The random
+number functions take a \udq{} variable as argument, that is only to ensure that
+the shape of the result value is correct.
+
+\begin{description}
+\item[RANDN] Random numbers from distribution $N(0,1)$ seeded deterministically
+  by item 1 in \kw{UDQPARAMS}.
+\item[RANDU] Random numbers from distribution $U(-1,1)$ seeded deterministically
+  by item 1 in \kw{UDQPARAMS}.
+\item[RRNDN] Random numbers from distribution $N(0,1)$ seeded by the clock.
+\item[RRNDU] Random numbers from distribution $U(-1,1)$ seeded by the clock.
+\end{description}
+
+Assuming the argument vector \kw{WU1} looks like 
+\begin{code}
+  WU1 = {"OP1": -2, "OP2": [], "WI": 1, "GI": []},
+\end{code}
+the result of \kw{DEFINE WURAND RANDU(WU1)} could be like
+\begin{code}
+ WURAND = {"OP1": 0.576, "OP2": [], "WI": -0.132, "GI": []}.
+\end{code}
+
+\subsubsection*{Work with defined status}
+The functions \kw{DEF}, \kw{UNDEF} and \kw{IDV} can be used to inspect the
+defined/not defined status of the elements in a \udq{} set.
+
+\begin{description}
+  \item[DEF] Return a set with value 1 for all defined elements.
+  \item[UNDEF] Return a set with value 1 for all undefined elements.
+  \item[IDV] Return a set with value 1 for all defined elements and value 0 for
+    all undefined elements.
+\end{description}
+
+Assuming the input argument
+
+\begin{code}
+  WU1 = {"OP1": -2, "OP2": [], "WI": 1, "GI": []},
+\end{code}
+
+the \udq{} assignments
+
+\begin{deck}
+UDQ
+  DEFINE WUDEF   DEF(WU1) /
+  DEFINE WUUNDEF UNDEF(WU1) /
+  DEFINE WUIDV   IDV(WU1) /
+/
+\end{deck}
+
+will produce:
+
+\begin{code}
+  WUDEF   = {"OP1": 1,  "OP2": [], "WI": 1,  "GI": []},
+  WUUNDEF = {"OP1": [], "OP2": 1,  "WI": [], "GI": 1},
+  WUIDV   = {"OP1": 1,  "OP2": 0,  "WI": 1,  "GI": 0},
+\end{code}
+
+
+
+\subsection{Union functions}
+\label{udq_union_functions}
+There are a list of functions \kw{Uxxx} which operate on the union of the values
+found in the two sets, i.e. a result is assigned if at at least one set has
+defined value for this well/group.
+\begin{description}
+\item[UADD] Will add the items from the two sets.
+\item[UMUL] Will multiply the items from the two sets.
+\item[UMAX] The maximum value from the two sets.
+\item[UMIN] The minumum value from the two sets.
+\end{description}
+In the case where only one of the sets has a defined value the operation will be
+performed \emph{as if} the function \kw{Uxxx} is the identity function.
+
+
+As an example consider the two sets:
+\begin{code}
+  WU1     = {"OP1": 1, "OP2": [], "WI": 2,  "GI": []},
+  WU2     = {"OP1": 6, "OP2": 5,  "WI": [], "GI": []},
+\end{code}
+
+and the \udq{} expression \kw{DEFINE WUUADD WU1 UADD WU2}, then the resulting
+set \kw{WUUADD} will be
+\begin{code}
+  WUUADD  = {"OP1": 7, "OP2": 5,  "WI": 2,  "GI": []}.
+\end{code}
+This in contrast to a normal $+$ which only operates on the intersection of the
+two sets, only well OP1 would have a defined value in this case.
+
+
+\section{Used as a control: UDA}
+\label{uda}
+Probably one of the most important uses of the \udq{} functionality is the
+ability to use a \udq{} as control in e.g. the \kw{WCONINJE} keyword. In the
+example below we calculate the produced liquid volume from a group of wells and
+use that as injection target for a water injector:
+
+\begin{deck}
+UDQ
+  DEFINE FULPR  (WOPR P* + WWPR P*) * 1.25 /
+/
+
+...
+...
+
+WCONINJE
+  WI  'WATER'  'OPEN'  'RATE'   'FULPR' /
+/
+\end{deck}
+
+In the following insane example we distribute the current oil production rate
+randomly among the producers and use that as target for the next timestep - do
+not try this at home:
+\begin{deck}
+UDQ
+  -- Create a 0 / 1 mask with 0 for injectors and 1 for producers.
+  DEFINE WUPROD WOPR > 0 /
+  
+  -- Create a vector of random numbers [0,1] for all producers
+  DEFINE WURAND 0.5 * (RANDU(WUPROD) + 1) * WUPROD /
+
+  -- Create a vector where all producers get a random fraction of
+  -- the current total oil production rate
+  DEFINE WUOPR FOPR * WURAND / SUM(WURAND) /
+/
+
+-- Need to have a well list or similar to select all producers for 
+-- the WCONPROD keyword.
+WLIST
+  'P' 'ADD' ..... /
+
+
+WCONPROD
+ '*P' 'OPEN' 'ORAT'  'WUOPR' /
+/
+\end{deck}
+One point about this example is that the \udq{} variable \kw{WUOPR} which is
+used as as control in the \kw{WCONPROD} is a well set, the lookup machinery will
+automatically use the correct well index when assigning control value to a
+particular well.
+
+From an implementation point of view the \kw{UDA} functionality creates a
+significant complexity, because the actual rate to use in the simulation must be
+evaluated \emph{just in time}.
+
+\section{\udq{} units}
+\label{udq_units}
+The \udq{} subcommand \kw{UNIT} can be used to assign a string which is used as
+output unit when the \udq{} variable is output to the summary file. This is
+\emph{only} a string and does not induce any unit conversion. All \udq{}
+evaluations are in terms of the corre deck units - irrespective of the \kw{UNIT}
+subcommand. Consider the following
+\begin{deck}
+RUNSPEC
+
+FIELD
+
+...
+...
+
+SCHEDULE
+
+UDQ
+  DEFINE WUI WWIR - 100 /
+/
+\end{deck}
+
+\begin{enumerate}
+\item The simulation runs in SI units; hence the water injection rate is
+  calculated in $\mathrm{m^3/s}$.
+\item As part of the summary evaluation the \inlinecode{SummaryState} will
+  contain the water injection rate converted to field units.
+\item The \udq{} variable \kw{WUI} is evaluated as the water injection rate from
+  \inlinecode{SummaryState} subtracted numerical value 100, \emph{it is solely the users 
+  responsability that the numerical value 100 represents water injection rate in
+  field units.}
+\end{enumerate}
+
+Observe that the units are complicated, and non intuitive for \kw{UDA} values.
+The \kw{UDA} evaluation is based on the \inlinecode{SummaryState} class which is
+in deck units, the controls determined by \kw{UDA} evaluation must therefor be
+converted to SI units just when it is passed to the simulator. The initial
+design ambition was to block the deck units at the IO boundary, keeping the
+internals fully in SI. The \kw{UDA} concept is the exception which manages to
+inject deck units quite far into the code.
+
+
+\section{Implementation details}
+The significant part of the UDQ implementation is in classes located in
+\path{opm/input/eclipse/Schedule/UDQ}, in addition the restart output of
+\udq{}/\kw{UDA} values is in \path{opm/output/eclipse/AggregateUDQData.cpp}.
+Finally the \udq{} parser makes use of the type \inlinecode{RawString} to treat
+literal ``/'' and ``*'' different from ordinary parsing where ``/'' signifies
+end of line and ``*'' is either a default or part of a multiplier expression.
+
+\subsection*{\inlinecode{UDQConfig}}
+The class \inlinecode{UDQConfig} internalizes the parsing of the \udq{} keywords
+from the input deck. The \inlinecode{UDQConfig} instance is time-versioned and
+managed by the \inlinecode{ScheduleState} class. The \inlinecode{UDQConfig} is
+immutable while the simulator is executing. The \inlinecode{UDQConfig} contains
+two main classes \inlinecode{UDQDefine} and \inlinecode{UDQAssign} in addition
+to book-keeping code to keep track of what type of expression a \udq{} keyword
+is at the time. A significant part of the book-keeping is only required to be
+able to output restart files in \eclipse{} format.
+
+\subsection*{\inlinecode{UDQDefine} and \inlinecode{UDQASTNode}}
+The \inlinecode{UDQDefine} manages a parsed \udq{} expresssion along with a
+chunck of metadata. The parsed \udq{} expression is managed in an instance of
+\inlinecode{UDQASTNode}. The \inlinecode{UDQASTNode} contains a parsed tree
+representation of the \udq{} input expression. The parsing of \udq{} expressions
+happens at input time, and for the rest of the simulation the
+\inlinecode{UDQASTnode} instances are immutable.
+
+Many scalar \udq{} types are defined in the file \path{UDQEenums.hpp} and in the
+namespace \inlinecode{UDQ} there are many small utility functions to work with
+these enums.
+
+
+\subsection*{\inlinecode{SummaryState}}
+\label{summarystate}
+The \inlinecode{SummaryState} class is not part of the \udq{} implementation,
+but it is a very important class for the \udq{} functionality. At the end of
+every timestep the simulator will call the method \inlinecode{evalSummary} which
+will call into opm-common and evaluate all summary variables and store them in a
+\inlinecode{SummaryState} instance\footnote{Observe that during initialization
+the \udq{} expressions are inspected, and we make sure that all summary
+variables needed to evaulate \udq{} expressions are evaluated in the Summary
+evaluation.}. The \inlinecode{SummaryState} class manages a set of maps with
+well, group and field variables, when evaluating e.g. the \kw{WOPR} the results
+will be stored in a two level map first indexed with keyword \kw{WOPR} and then
+with well name. Afterwards the \udq{} layer can fetch values with
+\inlinecode{SummaryState::get\_well\_var()}. The values in the
+\inlinecode{SummaryState} have been converted to output units, this is important
+for the \kw{UDA} evaluation.
+
+At the end of every timestep the \inlinecode{UDQConfig::eval()} method is called
+to evaluate all the \udq{} expressions, the evaluated values will end up in the
+active \inlinecode{SummaryState} instance, i.e. for this \udq{}
+\begin{deck}
+UDQ
+  DEFINE FUOPR SUM(WOPR) /
+  DEFINE WUGWR WGPR / WWPR /
+/
+\end{deck}
+we will get \inlinecode{SummaryState} entries for \kw{FUOPR} and \kw{WUGWR} for
+\emph{all} wells in the model. These \inlinecode{SummaryState} values can then
+be output to the summary file, be used when evaluating \kw{ACTIONX} keywords or
+to evaluate \kw{UDA} control values.
+
+In addition to the \inlinecode{SummaryState} variable there is an instance of
+type \inlinecode{UDQState} which is updated runtime, the \inlinecode{UDQState}
+instance holds on to the results of \udq{} evaluations with more context than
+\inlinecode{SummaryState} and is used to output \udq{} and \kw{UDA} state to the
+restart files. While evaluating the simulator will create a \kw{UDQContext}
+variable which will manage both the \inlinecode{SummaryState},
+\inlinecode{UDQState} and also some \udq{} parameters from the \kw{RUNSPEC}
+section. The lifetime of the \kw{UDQContext} instance is only one \udq{}
+evaluation.
+
+While evaluating the \udq{} expressions the results will be instances of
+\inlinecode{UDQSet} which is a small container class which keeps track of
+well/group names and whether a value is defined or not. The \inlinecode{UDQSet}
+class overrides the arithmetic operators like \inlinecode{UDQSet::operator+()}
+so that expressions like \kw{2 * WOPR 'OP*'} can be easily evaluated in code.
+
+\subsection*{Paralell awareness}
+\label{udq_parallel}
+The opm-common code where the \udq{} functionality is implemented is totally
+unaware of parallel execution, so to be certain that this works for a parallel
+simulator care must be taken. In flow this is handled as:
+\begin{enumerate}
+  \item The \inlinecode{Schedule} class as a whole is identical on all
+    processes.
+  \item The state variables \inlinecode{UDQState} and \inlinecode{SummaryState}
+    are distributed so they are equal on all processes before the \udq{}
+    evaluation. This communication is performed in the simulator.
+\end{enumerate}
+The \udq{} evaluation is invoked from
+\path{opm-simulators/ebos/eclgenericwriter.cc} function
+\inlinecode{evalSummary()}.
+
+
+

dune.module

@@ -5,8 +5,8 @@
 
 Module: opm-common
 Description: Open Porous Media Initiative shared infrastructure
-Version: 2021.10-pre
-Label: 2021.10-pre
+Version: 2022.10
+Label: 2022.10
 Maintainer: opm@opm-project.org
 MaintainerName: OPM community
 Url: http://opm-project.org

examples/make_ext_smry.cpp

@@ -18,6 +18,7 @@
 */
 
 
+#include <filesystem>
 #include <iostream>
 #include <getopt.h>
 #include <string.h>
@@ -31,7 +32,6 @@
 
 #include <opm/io/eclipse/ESmry.hpp>
 #include <opm/io/eclipse/EclUtil.hpp>
-#include <opm/common/utility/FileSystem.hpp>
 
 
 static void printHelp() {
@@ -93,9 +93,9 @@ int main(int argc, char **argv) {
 
     #pragma omp parallel for
     for (int f = argOffset; f < argc; f ++){
-        Opm::filesystem::path inputFileName = argv[f];
+        std::filesystem::path inputFileName = argv[f];
 
-        Opm::filesystem::path esmryFileName = inputFileName.parent_path() / inputFileName.stem();
+        std::filesystem::path esmryFileName = inputFileName.parent_path() / inputFileName.stem();
         esmryFileName = esmryFileName += ".ESMRY";
 
         if (Opm::EclIO::fileExists(esmryFileName) && (force))

examples/msim.cpp

@@ -19,14 +19,16 @@
 
 #include <opm/output/eclipse/EclipseIO.hpp>
 
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Deck/Deck.hpp>
 
-#include <opm/parser/eclipse/Python/Python.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Schedule.hpp>
-#include <opm/parser/eclipse/EclipseState/SummaryConfig/SummaryConfig.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
+
+#include <opm/input/eclipse/Python/Python.hpp>
+#include <opm/input/eclipse/EclipseState/EclipseState.hpp>
+#include <opm/input/eclipse/Schedule/Schedule.hpp>
+#include <opm/input/eclipse/EclipseState/SummaryConfig/SummaryConfig.hpp>
 #include <opm/common/OpmLog/OpmLog.hpp>
 
 #include <opm/msim/msim.hpp>
@@ -51,8 +53,8 @@ int main(int /* argc */, char** argv) {
         error_guard.terminate();
     }
 
-    Opm::msim msim(state);
+    Opm::msim msim(state, schedule);
     Opm::EclipseIO io(state, state.getInputGrid(), schedule, summary_config);
-    msim.run(schedule, io, false);
+    msim.run(io, false);
 }
 

examples/opmhash.cpp

@@ -24,14 +24,10 @@
 #include <cstdlib>
 #include <fmt/format.h>
 
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
-#include <opm/parser/eclipse/Deck/Deck.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/SummaryConfig/SummaryConfig.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Schedule.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Deck/Deck.hpp>
 
 
 struct keyword {

examples/opmi.cpp

@@ -21,15 +21,15 @@
 #include <iomanip>
 #include <chrono>
 
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
-#include <opm/parser/eclipse/Deck/Deck.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/SummaryConfig/SummaryConfig.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Schedule.hpp>
-#include <opm/parser/eclipse/Python/Python.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Deck/Deck.hpp>
+#include <opm/input/eclipse/EclipseState/EclipseState.hpp>
+#include <opm/input/eclipse/EclipseState/EclipseState.hpp>
+#include <opm/input/eclipse/EclipseState/SummaryConfig/SummaryConfig.hpp>
+#include <opm/input/eclipse/Schedule/Schedule.hpp>
+#include <opm/input/eclipse/Python/Python.hpp>
 
 #include <opm/common/OpmLog/OpmLog.hpp>
 #include <opm/common/OpmLog/StreamLog.hpp>

examples/opmpack.cpp

@@ -17,21 +17,23 @@
   along with OPM.  If not, see <http://www.gnu.org/licenses/>.
 */
 
+#include <filesystem>
 #include <fstream>
 #include <iostream>
 #include <getopt.h>
 
-#include <opm/common/utility/FileSystem.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/I.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/P.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/G.hpp>
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/InputErrorAction.hpp>
-#include <opm/parser/eclipse/Deck/Deck.hpp>
+#include <opm/input/eclipse/Deck/Deck.hpp>
+#include <opm/input/eclipse/EclipseState/InitConfig/InitConfig.hpp>
+#include <opm/input/eclipse/EclipseState/IOConfig/IOConfig.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/I.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/P.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/G.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/InputErrorAction.hpp>
 
-namespace fs = Opm::filesystem;
+namespace fs = std::filesystem;
 
 Opm::Deck pack_deck( const char * deck_file, std::ostream& os) {
     Opm::ParseContext parseContext(Opm::InputError::WARN);
@@ -154,16 +156,14 @@ int main(int argc, char** argv) {
             }
 
             using IMPORT = Opm::ParserKeywords::IMPORT;
-            for (std::size_t import_index = 0; import_index < deck.count<IMPORT>(); import_index++) {
-                const auto& import_keyword = deck.getKeyword<IMPORT>(import_index);
+            for (const auto& import_keyword : deck.get<IMPORT>()) {
                 const auto& fname = import_keyword.getRecord(0).getItem<IMPORT::FILE>().get<std::string>(0);
                 copy_file(input_arg.parent_path(), fname, output_dir);
             }
 
 
             using PYACTION = Opm::ParserKeywords::PYACTION;
-            for (std::size_t pyaction_index = 0; pyaction_index < deck.count<PYACTION>(); pyaction_index++) {
-                const auto& pyaction_keyword = deck.getKeyword<PYACTION>(pyaction_index);
+            for (const auto& pyaction_keyword : deck.get<PYACTION>()) {
                 const auto& fname = pyaction_keyword.getRecord(1).getItem<PYACTION::FILENAME>().get<std::string>(0);
                 copy_file(input_arg.parent_path(), fname, output_dir);
             }
@@ -171,7 +171,7 @@ int main(int argc, char** argv) {
 
             using GDFILE = Opm::ParserKeywords::GDFILE;
             if (deck.hasKeyword<GDFILE>()) {
-                const auto& gdfile_keyword = deck.getKeyword<GDFILE>();
+                const auto& gdfile_keyword = deck.get<GDFILE>().back();
                 const auto& fname = gdfile_keyword.getRecord(0).getItem<GDFILE::filename>().get<std::string>(0);
                 copy_file(input_arg.parent_path(), fname, output_dir);
             }

examples/rst_deck.cpp

@@ -18,28 +18,30 @@
 */
 
 #include <cstdlib>
+#include <filesystem>
 #include <fstream>
 #include <iostream>
 #include <getopt.h>
 #include <fmt/format.h>
 #include <unordered_set>
+#include <utility>
 
-#include <opm/parser/eclipse/Deck/DeckKeyword.hpp>
-#include <opm/common/utility/FileSystem.hpp>
-#include <opm/parser/eclipse/Units/UnitSystem.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/I.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/P.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/G.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/R.hpp>
-#include <opm/parser/eclipse/Parser/ParserKeywords/S.hpp>
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/InputErrorAction.hpp>
-#include <opm/parser/eclipse/Deck/Deck.hpp>
-#include <opm/parser/eclipse/Deck/FileDeck.hpp>
+#include <opm/input/eclipse/Deck/DeckKeyword.hpp>
+#include <opm/input/eclipse/Units/UnitSystem.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/I.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/P.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/G.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/R.hpp>
+#include <opm/input/eclipse/Parser/ParserKeywords/S.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/InputErrorAction.hpp>
+#include <opm/input/eclipse/EclipseState/IOConfig/IOConfig.hpp>
+#include <opm/input/eclipse/Deck/Deck.hpp>
+#include <opm/input/eclipse/Deck/FileDeck.hpp>
 
-namespace fs = Opm::filesystem;
+namespace fs = std::filesystem;
 
 const std::unordered_set<std::string> remove_from_solution = {"EQUIL", "PRESSURE", "SWAT", "SGAS"};
 
@@ -63,7 +65,7 @@ output the program will update the SOLUTION and SCHEDULE sections. All keywords
 from the SOLUTION section will be cleared out(1) and a RESTART keyword will be
 inserted. In the SCHEDULE section the program can either remove all keywords up
 until the restart date, or alternatively insert SKIPREST immediately following
-the SCHEDULE keyword(2).
+the SCHEDULE keyword.
 
 When creating the updated restart deck the program can either link to unmodified
 include files with INCLUDE statements, create a copy of deck structure in an
@@ -76,9 +78,35 @@ Arguments:
 
 1. The data file we are starting with.
 
-2. The basename of the restart file - with an optional path prefix and a :N to
-   restart from step N(3). A restart step value of 0 is interpreted as a dry run
-   - a deck which has not been set up for restart will be written out.
+2. The restart source; this can either be a basename with an optional path
+   prefix and a :N to restart from step N; alternatively you can point to an
+   existing restart file. If you point to an existing restart file the input
+   will be validated in several ways:
+
+   a) Unified/multiple files will be checked against the UNIFIN setting of
+      the deck.
+
+   b) Formatted/unformatted will be checked against the FMTIn setting of the
+      deck.
+
+   c) If a single file like /path/to/case/HISTORY.X0067 is given as argument the
+      :N notation to denote report step should not be used.
+
+   If the restart argument is given as the path to an existing file the content
+   of the RESTART keyword will be updated to contain the correct path from the
+   location of the restart deck to the location of the restart file. This path
+   awareness will be fooled if the restart deck is redirected from stdout to a
+   path different from cwd. If the restart argument is given as an absolute
+   filename the RESTART keyword will have an absolute path, if the restart
+   argument is a relative path the RESTART keyword will get a relative path -
+   although an absolute path will be used if the restart file and the output
+   deck have different roots. If the restart argument is given as a string not
+   pointing to an existing file it will be inserted verbatim in the restart
+   deck.
+
+   A restart step value of 0 is interpreted as a dry run - a deck which has not
+   been set up for restart will be written out.
+
 
 3. Basename of the restart deck we create, can optionally contain a path prefix;
    the path will be created if it does not already exist. This argument is
@@ -91,7 +119,7 @@ Options:
 -s: Manipulate the SCHEDULE section by inserting a SKIPREST keyword immediately
     following the SCHEDULE keyword. If the -s option is not used the SCHEDULE
     section will be modified by removing all keywords until we reach the restart
-    date. NB: Currently the -s option is required
+    date.
 
 -m: [share|inline|copy] The restart deck can reuse the unmodified include files
     from the base case, this is mode 'share' and is the default. With mode
@@ -102,7 +130,7 @@ Options:
     In the case of 'share' and 'copy' the correct path to include files will be
     negotiated based on the path given to the output case in the third argument.
     If the restart deck is passed to stdout the include files will be resolved
-    based on output in cwd. 
+    based on output in cwd.
 
 Example:
 
@@ -111,14 +139,6 @@ Example:
 1: The program has a compiled list of keywords which will be retained in the
    SOLUTION section. The current value of that list is: {}
 
-2: Current version of the program *only* supports the SKIPREST option, and the
-   -s option is required.
-
-3: The second argument is treated purely as a string and inserted verbatim into
-   the updated restart deck. In a future version we might interpret the second
-   argument as a file path and check the content and also do filesystem
-   manipulations from it.
-
 )", keep_keywords);
 
     std::cerr << help_text << std::endl;
@@ -130,17 +150,19 @@ Example:
 
 
 
-struct options {
+struct Options {
     std::string input_deck;
-    std::pair<std::string, int> restart;
-    std::optional<std::string> target;
+    std::string restart_base;
+    int restart_step;
+    std::optional<std::string> target_path;
+    std::optional<std::string> target_fname;
 
     Opm::FileDeck::OutputMode mode{Opm::FileDeck::OutputMode::SHARE};
     bool skiprest{false};
 };
 
 
-Opm::FileDeck load_deck(const options& opt) {
+Opm::Deck load_deck(const Options& opt) {
     Opm::ParseContext parseContext(Opm::InputError::WARN);
     Opm::ErrorGuard errors;
     Opm::Parser parser;
@@ -150,8 +172,7 @@ Opm::FileDeck load_deck(const options& opt) {
     parseContext.update(Opm::ParseContext::PARSE_MISSING_DIMS_KEYWORD, Opm::InputError::WARN);
     parseContext.update(Opm::ParseContext::SUMMARY_UNKNOWN_WELL, Opm::InputError::WARN);
     parseContext.update(Opm::ParseContext::SUMMARY_UNKNOWN_GROUP, Opm::InputError::WARN);
-    auto deck = parser.parseFile(opt.input_deck, parseContext, errors);
-    return Opm::FileDeck{ deck };
+    return parser.parseFile(opt.input_deck, parseContext, errors);
 }
 
 
@@ -169,17 +190,86 @@ Opm::FileDeck::OutputMode mode(const std::string& mode_arg) {
     return Opm::FileDeck::OutputMode::INLINE;
 }
 
-std::pair<std::string, std::size_t> split_restart(const std::string& restart_base) {
-    auto sep_pos = restart_base.rfind(':');
-    if (sep_pos == std::string::npos)
-        print_help_and_exit(fmt::format("Expected restart argument on the form: BASE:NUMBER - e.g. HISTORY:60"));
+std::optional<std::size_t> verify_extension(const std::string& extension, bool unified, bool formatted) {
+    if (unified) {
+        if (formatted) {
+            if (extension == ".FUNRST")
+                return std::nullopt;
+            print_help_and_exit("Deck has specified formatted unified input - expected restart extension: .FUNRST");
 
-    return std::make_pair(restart_base.substr(0, sep_pos), std::stoi(restart_base.substr(sep_pos + 1)));
+        }
+        if (extension == ".UNRST")
+            return std::nullopt;
+        print_help_and_exit("Deck has expected unformatted unified input - expected restart extension: .UNRST");
+    }
+
+    std::size_t report_step;
+    if ((formatted && (extension[1] == 'F')) || (!formatted && (extension[1] == 'X'))) {
+        try {
+            report_step = std::stoi(extension.substr(2));
+            return report_step;
+        }
+        catch (...) {}
+    }
+    print_help_and_exit("Deck has specified multiple input files - expected restart extension: .Xnnnn / .Fnnnn");
+    return std::nullopt;
 }
 
 
-options load_options(int argc, char **argv) {
-    options opt;
+bool same_mount(const fs::path& p1, const fs::path& p2) {
+    auto abs1 = fs::absolute(p1);
+    auto abs2 = fs::absolute(p2);
+
+    auto iter1 = abs1.begin(); iter1++;
+    auto iter2 = abs2.begin(); iter2++;
+
+    auto mnt1 = *iter1;
+    auto mnt2 = *iter2;
+    return (mnt1 == mnt2);
+}
+
+
+void update_restart_path(Options& opt, const std::string& restart_arg, const Opm::IOConfig& io_config) {
+    std::string base;
+    std::optional<std::size_t> rst_step;
+    auto sep_pos = restart_arg.rfind(':');
+
+    auto base_arg = restart_arg.substr(0, sep_pos);
+    if (fs::exists(base_arg)) {
+        auto unif = io_config.getUNIFIN();
+        auto fmt = io_config.getFMTIN();
+        auto path = fs::path(base_arg);
+        auto extension = path.extension();
+        rst_step = verify_extension(extension, unif, fmt);
+        if (path.is_absolute()) {
+            path.replace_extension();
+            base = path;
+        } else {
+            auto target_path = fs::current_path();
+            if (opt.target_path.has_value())
+                target_path = fs::path(opt.target_path.value());
+
+            if (same_mount(path, target_path))
+                base = fs::relative(path, target_path).replace_extension();
+            else
+                base = fs::canonical(fs::absolute(path)).replace_extension();
+        }
+    } else
+        base = base_arg;
+
+    if (!rst_step.has_value()) {
+        if (sep_pos == std::string::npos)
+            print_help_and_exit(fmt::format("Expected restart argument on the form: BASE:NUMBER - e.g. HISTORY:60"));
+        rst_step = std::stoi(restart_arg.substr(sep_pos + 1));
+    }
+
+    opt.restart_step = rst_step.value();
+    opt.restart_base = base;
+}
+
+
+std::pair<Options, std::string> load_options(int argc, char **argv) {
+    Options opt;
     while (true) {
         int c;
         c = getopt(argc, argv, "hm:s");
@@ -204,11 +294,21 @@ options load_options(int argc, char **argv) {
         print_help_and_exit();
 
     opt.input_deck = argv[arg_offset];
-    opt.restart = split_restart(argv[arg_offset + 1]);
+    std::string restart_arg = argv[arg_offset + 1];
     if ((argc - arg_offset) >= 3) {
-        opt.target = argv[arg_offset + 2];
+        auto target_arg = argv[arg_offset + 2];
+
+        if (fs::is_directory(target_arg)) {
+            opt.target_path = target_arg;
+            opt.target_fname = fs::path(opt.input_deck).filename();
+        } else {
+            auto target_path = fs::path( fs::absolute(target_arg) );
+            opt.target_path = fs::absolute(target_path.parent_path());
+            opt.target_fname = target_path.filename();
+        }
+
         if (opt.mode == Opm::FileDeck::OutputMode::COPY) {
-            auto target = fs::path(opt.target.value()).parent_path();
+            auto target = fs::path(target_arg).parent_path();
             if (fs::exists(target)) {
                 auto input = fs::path(opt.input_deck).parent_path();
                 if (fs::equivalent(target, input))
@@ -220,13 +320,13 @@ options load_options(int argc, char **argv) {
             print_help_and_exit("When writing output to stdout you must use inline|share mode");
     }
 
-    return opt;
+    return {opt, restart_arg};
 }
 
 
-void update_solution(const options& opt, Opm::FileDeck& file_deck)
+void update_solution(const Options& opt, Opm::FileDeck& file_deck)
 {
-    if (opt.restart.second == 0)
+    if (opt.restart_step == 0)
         return;
 
     const auto solution = file_deck.find("SOLUTION");
@@ -237,35 +337,33 @@ void update_solution(const options& opt, Opm::FileDeck& file_deck)
     if (!summary.has_value())
         print_help_and_exit(fmt::format("Could not find SUMMARY section in input deck: {}", opt.input_deck));
 
-    file_deck.rst_solution(opt.restart.first, opt.restart.second);
+    file_deck.rst_solution(opt.restart_base, opt.restart_step);
 }
 
 
-void update_schedule(const options& opt, Opm::FileDeck& file_deck)
+void update_schedule(const Options& opt, Opm::FileDeck& file_deck)
 {
-    if (opt.restart.second == 0)
+    if (opt.restart_step == 0)
         return;
 
     if (opt.skiprest)
         file_deck.insert_skiprest();
+    else
+        file_deck.skip(opt.restart_step);
 }
 
 
 int main(int argc, char** argv) {
-    auto options = load_options(argc, argv);
-    auto file_deck = load_deck(options);
+    auto [options, restart_arg] = load_options(argc, argv);
+    auto deck = load_deck(options);
+    Opm::FileDeck file_deck(deck);
+
+    update_restart_path(options, restart_arg, Opm::IOConfig(deck));
     update_solution(options, file_deck);
     update_schedule(options, file_deck);
-    if (!options.target.has_value())
+    if (!options.target_path.has_value())
         file_deck.dump_stdout(fs::current_path(), options.mode);
-    else {
-        std::string target = options.target.value();
-        if (fs::is_directory(target))
-            file_deck.dump( fs::absolute(target), fs::path(options.input_deck).filename(), options.mode );
-        else {
-            auto target_path = fs::path( fs::absolute(options.target.value()) );
-            file_deck.dump( fs::absolute(target_path.parent_path()), target_path.filename(), options.mode );
-        }
-    }
+    else
+        file_deck.dump( options.target_path.value(), options.target_fname.value(), options.mode);
 }
 

examples/wellgraph.cpp

@@ -17,24 +17,24 @@
   along with OPM.  If not, see <http://www.gnu.org/licenses/>.
 */
 
+#include <filesystem>
 #include <fstream>
 #include <iomanip>
+#include <iostream>
 #include <chrono>
 #include <sstream>
 
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
-#include <opm/parser/eclipse/Deck/Deck.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Schedule.hpp>
-#include <opm/parser/eclipse/Python/Python.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Deck/Deck.hpp>
+#include <opm/input/eclipse/EclipseState/EclipseState.hpp>
+#include <opm/input/eclipse/Schedule/Schedule.hpp>
+#include <opm/input/eclipse/Python/Python.hpp>
 
 #include <opm/common/OpmLog/OpmLog.hpp>
 #include <opm/common/OpmLog/StreamLog.hpp>
 #include <opm/common/OpmLog/LogUtil.hpp>
-#include <opm/common/utility/FileSystem.hpp>
 
 
 inline void createDot(const Opm::Schedule& schedule, const std::string& casename)
@@ -85,6 +85,7 @@ inline void createDot(const Opm::Schedule& schedule, const std::string& casename
     }
     os << "}\n";
     std::cout << "complete." << std::endl;
+    std::cout << "Convert output to PDF with 'dot -Tpdf " << casename << ".gv > " << casename << ".pdf'\n" << std::endl;
 }
 
 
@@ -123,7 +124,7 @@ int main(int argc, char** argv)
         for (int iarg = 1; iarg < argc; iarg++) {
             const std::string filename = argv[iarg];
             const auto sched = loadSchedule(filename);
-            const auto casename = Opm::filesystem::path(filename).stem();
+            const auto casename = std::filesystem::path(filename).stem();
             createDot(sched, casename);
         }
     } catch (const std::exception& e) {

jenkins/build-opm-module.sh

@@ -3,7 +3,7 @@
 declare -A configurations
 
 declare -A EXTRA_MODULE_FLAGS
-EXTRA_MODULE_FLAGS[opm-simulators]="-DBUILD_EBOS_EXTENSIONS=ON -DBUILD_EBOS_DEBUG_EXTENSIONS=ON -DBUILD_FLOW_VARIANTS=ON -DOPM_ENABLE_PYTHON=ON -DBUILD_FLOW_POLY_GRID=ON"
+EXTRA_MODULE_FLAGS[opm-simulators]="-DBUILD_FLOW_VARIANTS=ON -DOPM_ENABLE_PYTHON=ON -DBUILD_FLOW_POLY_GRID=ON"
 EXTRA_MODULE_FLAGS[opm-common]="-DOPM_ENABLE_PYTHON=ON -DOPM_ENABLE_EMBEDDED_PYTHON=ON -DOPM_INSTALL_PYTHON=ON"
 
 # Parse revisions from trigger comment and setup arrays
@@ -16,7 +16,12 @@ function parseRevisions {
   do
     if grep -qi "$upstream=" <<< $ghprbCommentBody
     then
-      upstreamRev[$upstream]=pull/`echo $ghprbCommentBody | sed -r "s/.*${upstream,,}=([0-9]+).*/\1/g"`/merge
+      if test -n "$absolute_revisions"
+      then
+        upstreamRev[$upstream]=`echo $ghprbCommentBody | sed -r "s/.*${upstream,,}=([^ ]+).*/\1/g"`
+      else
+        upstreamRev[$upstream]=pull/`echo $ghprbCommentBody | sed -r "s/.*${upstream,,}=([0-9]+).*/\1/g"`/merge
+      fi
     fi
   done
   if grep -q "with downstreams" <<< $ghprbCommentBody
@@ -25,8 +30,13 @@ function parseRevisions {
     do
       if grep -qi "$downstream=" <<< $ghprbCommentBody
       then
-        downstreamRev[$downstream]=pull/`echo $ghprbCommentBody | sed -r "s/.*${downstream,,}=([0-9]+).*/\1/g"`/merge
-      fi
+        if test -n "$absolute_revisions"
+        then
+          downstreamRev[$downstream]=`echo $ghprbCommentBody | sed -r "s/.*${downstream,,}=([^ ]+).*/\1/g"`
+        else
+          downstreamRev[$downstream]=pull/`echo $ghprbCommentBody | sed -r "s/.*${downstream,,}=([0-9]+).*/\1/g"`/merge
+       fi
+     fi
     done
   fi
 
@@ -226,7 +236,7 @@ function build_module_full {
   PY_MINOR=`python3 --version | awk -F ' ' '{print $2}' | awk -F '.' '{print $2}'`
   for configuration in ${!configurations[@]}
   do
-    export PYTHONPATH="$WORKSPACE/$configuration/install/lib/python$PY_MAJOR.$PY_MINOR/dist-packages"
+    export PYTHONPATH="$WORKSPACE/$configuration/install/lib/python$PY_MAJOR.$PY_MINOR/site-packages"
 
     # Build upstream modules
     build_upstreams

jenkins/setup-opm-tests.sh

@@ -33,7 +33,7 @@ else
   then
     cp $OPM_TESTS_ROOT $WORKSPACE/deps/opm-tests -R
     pushd $WORKSPACE/deps/opm-tests
-    echo "opmt-tests-revision: `git rev-parse HEAD`"
+    echo "opm-tests-revision: `git rev-parse HEAD`"
     popd
   fi
 fi

jenkins/update-opm-tests.sh

@@ -22,6 +22,7 @@ upstreamRev[opm-grid]=master
 upstreamRev[opm-models]=master
 upstreamRev[opm-simulators]=master
 upstreamRev[opm-upscaling]=master
+upstreamRev[opm-tests]=master
 
 # Setup revision tables
 parseRevisions
@@ -43,6 +44,12 @@ done
 
 # Do the commit
 export REASON
+if [ "${upstreamRev[opm-tests]}" == "master" ]
+then
+  export BRANCH_BASE=origin/master
+else
+  export BRANCH_BASE=${upstreamRev[opm-tests]}
+fi
 export BRANCH_NAME
 $WORKSPACE/deps/opm-simulators/tests/update_reference_data.sh $OPM_TESTS_ROOT $WORKSPACE/$configuration/build-opm-simulators $WORKSPACE/$configuration/install/bin/convertECL
 if test $? -eq 5

msim/include/opm/msim/msim.hpp

@@ -6,17 +6,15 @@
 #include <map>
 #include <string>
 
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
-#include <opm/parser/eclipse/Deck/Deck.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/EclipseState.hpp>
-#include <opm/parser/eclipse/EclipseState/SummaryConfig/SummaryConfig.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Schedule.hpp>
+#include <opm/input/eclipse/Schedule/SummaryState.hpp>
+#include <opm/input/eclipse/EclipseState/EclipseState.hpp>
+#include <opm/input/eclipse/Schedule/Schedule.hpp>
+#include <opm/input/eclipse/Schedule/Action/State.hpp>
 
 #include <opm/output/data/Solution.hpp>
 #include <opm/output/data/Wells.hpp>
 #include <opm/output/data/Groups.hpp>
-#include <opm/parser/eclipse/Deck/UDAValue.hpp>
+#include <opm/input/eclipse/Deck/UDAValue.hpp>
 
 
 namespace Opm {
@@ -25,38 +23,39 @@ class EclipseIO;
 class ParseContext;
 class Parser;
 class Python;
-class SummaryState;
 class UDQState;
 class WellTestState;
 
-namespace Action {
-class State;
-}
-
 class msim {
 
 public:
     using well_rate_function = double(const EclipseState&, const Schedule&, const SummaryState& st, const data::Solution&, size_t report_step, double seconds_elapsed);
     using solution_function = void(const EclipseState&, const Schedule&, data::Solution&, size_t report_step, double seconds_elapsed);
 
-    msim(const EclipseState& state);
+    msim(const EclipseState& state, const Schedule& schedule_arg);
 
     Opm::UDAValue uda_val();
 
     void well_rate(const std::string& well, data::Rates::opt rate, std::function<well_rate_function> func);
     void solution(const std::string& field, std::function<solution_function> func);
-    void run(Schedule& schedule, EclipseIO& io, bool report_only);
-    void post_step(Schedule& schedule, Action::State& action_state, SummaryState& st, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, const time_point& sim_time);
+    void run(EclipseIO& io, bool report_only);
+    void post_step(data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, const time_point& sim_time);
+
 private:
 
-    void run_step(const Schedule& schedule, Action::State& action_state, WellTestState& wtest_state, SummaryState& st, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, EclipseIO& io) const;
-    void run_step(const Schedule& schedule, Action::State& action_state, WellTestState& wtest_state, SummaryState& st, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, double dt, EclipseIO& io) const;
-    void output(Action::State& action_state, WellTestState& wtest_state, SummaryState& st, const UDQState& udq_state, size_t report_step, bool substep, double seconds_elapsed, const data::Solution& sol, const data::Wells& well_data, const data::GroupAndNetworkValues& group_data, EclipseIO& io) const;
-    void simulate(const Schedule& schedule, WellTestState& wtest_state, const SummaryState& st, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, double seconds_elapsed, double time_step) const;
+    void run_step(WellTestState& wtest_state, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, EclipseIO& io);
+    void run_step(WellTestState& wtest_state, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, double dt, EclipseIO& io);
+    void output(WellTestState& wtest_state, const UDQState& udq_state, size_t report_step, bool substep, double seconds_elapsed, const data::Solution& sol, const data::Wells& well_data, const data::GroupAndNetworkValues& group_data, EclipseIO& io);
+    void simulate(data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, double seconds_elapsed, double time_step);
 
     EclipseState state;
     std::map<std::string, std::map<data::Rates::opt, std::function<well_rate_function>>> well_rates;
     std::map<std::string, std::function<solution_function>> solutions;
+
+public:
+    Schedule schedule;
+    Action::State action_state;
+    SummaryState st;
 };
 }
 

msim/src/msim.cpp

@@ -27,32 +27,30 @@
 #include <opm/output/data/Solution.hpp>
 #include <opm/output/data/Wells.hpp>
 #include <opm/output/data/Groups.hpp>
-#include <opm/parser/eclipse/Python/Python.hpp>
+#include <opm/input/eclipse/Python/Python.hpp>
 
-#include <opm/parser/eclipse/EclipseState/Schedule/SummaryState.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Action/ActionContext.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Action/State.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/UDQ/UDQState.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/UDQ/UDQConfig.hpp>
-#include <opm/parser/eclipse/EclipseState/Schedule/Well/WellTestState.hpp>
-#include <opm/parser/eclipse/Parser/Parser.hpp>
-#include <opm/parser/eclipse/Parser/ParseContext.hpp>
-#include <opm/parser/eclipse/Parser/ErrorGuard.hpp>
+#include <opm/input/eclipse/Schedule/Action/ActionContext.hpp>
+#include <opm/input/eclipse/Schedule/UDQ/UDQState.hpp>
+#include <opm/input/eclipse/Schedule/UDQ/UDQConfig.hpp>
+#include <opm/input/eclipse/Schedule/Well/WellTestState.hpp>
+#include <opm/input/eclipse/Parser/Parser.hpp>
+#include <opm/input/eclipse/Parser/ParseContext.hpp>
+#include <opm/input/eclipse/Parser/ErrorGuard.hpp>
 #include <opm/msim/msim.hpp>
 
 namespace Opm {
 
-msim::msim(const EclipseState& state_arg) :
-    state(state_arg)
+msim::msim(const EclipseState& state_arg, const Schedule& schedule_arg)
+    : state(state_arg)
+    , schedule(schedule_arg)
+    , st(TimeService::from_time_t(this->schedule.getStartTime()))
 {}
 
-void msim::run(Schedule& schedule, EclipseIO& io, bool report_only) {
+void msim::run(EclipseIO& io, bool report_only) {
     const double week = 7 * 86400;
     data::Solution sol;
-    SummaryState st(TimeService::from_time_t(schedule.getStartTime()));
-    UDQState udq_state(schedule.getUDQConfig(0).params().undefinedValue());
+    UDQState udq_state(this->schedule.getUDQConfig(0).params().undefinedValue());
     WellTestState wtest_state;
-    Action::State action_state;
     Python python;
 
     io.writeInitial();
@@ -60,13 +58,13 @@ void msim::run(Schedule& schedule, EclipseIO& io, bool report_only) {
         data::Wells well_data;
         data::GroupAndNetworkValues group_nwrk_data;
         if (report_only)
-            run_step(schedule, action_state, wtest_state, st, udq_state, sol, well_data, group_nwrk_data, report_step, io);
+            run_step(wtest_state, udq_state, sol, well_data, group_nwrk_data, report_step, io);
         else {
             double time_step = std::min(week, 0.5*schedule.stepLength(report_step - 1));
-            run_step(schedule, action_state, wtest_state, st, udq_state, sol, well_data, group_nwrk_data, report_step, time_step, io);
+            run_step(wtest_state, udq_state, sol, well_data, group_nwrk_data, report_step, time_step, io);
         }
         auto sim_time = TimeService::from_time_t( schedule.simTime(report_step) );
-        post_step(schedule, action_state, st, sol, well_data, group_nwrk_data, report_step, sim_time);
+        post_step(sol, well_data, group_nwrk_data, report_step, sim_time);
         const auto& exit_status = schedule.exitStatus();
         if (exit_status.has_value())
             return;
@@ -78,33 +76,33 @@ UDAValue msim::uda_val() {
 }
 
 
-void msim::post_step(Schedule& schedule, Action::State& action_state, SummaryState& st, data::Solution& /* sol */, data::Wells& /* well_data */, data::GroupAndNetworkValues& /* grp_nwrk_data */, size_t report_step, const time_point& sim_time) {
-    const auto& actions = schedule[report_step].actions.get();
+void msim::post_step(data::Solution& /* sol */, data::Wells& /* well_data */, data::GroupAndNetworkValues& /* grp_nwrk_data */, size_t report_step, const time_point& sim_time) {
+    const auto& actions = this->schedule[report_step].actions.get();
     if (actions.empty())
         return;
 
-    Action::Context context( st , schedule[report_step].wlist_manager.get());
+    Action::Context context( this->st , this->schedule[report_step].wlist_manager.get());
 
-    for (const auto& action : actions.pending(action_state, std::chrono::system_clock::to_time_t(sim_time))) {
+    for (const auto& action : actions.pending(this->action_state, std::chrono::system_clock::to_time_t(sim_time))) {
         auto result = action->eval(context);
         if (result)
-            schedule.applyAction(report_step, sim_time, *action, result, {});
+            this->schedule.applyAction(report_step, *action, result.wells(), {});
     }
 
-    for (const auto& pyaction : actions.pending_python())
-        pyaction->run(this->state, schedule, report_step, st);
+    for (const auto& pyaction : actions.pending_python(this->action_state))
+        this->schedule.runPyAction(report_step, *pyaction, this->action_state, this->state, this->st);
 }
 
 
 
-void msim::run_step(const Schedule& schedule, Action::State& action_state, WellTestState& wtest_state, SummaryState& st, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& grp_nwrk_data, size_t report_step, EclipseIO& io) const {
-    this->run_step(schedule, action_state, wtest_state, st, udq_state, sol, well_data, grp_nwrk_data, report_step, schedule.stepLength(report_step - 1), io);
+void msim::run_step(WellTestState& wtest_state, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& grp_nwrk_data, size_t report_step, EclipseIO& io) {
+    this->run_step(wtest_state, udq_state, sol, well_data, grp_nwrk_data, report_step, schedule.stepLength(report_step - 1), io);
 }
 
 
-void msim::run_step(const Schedule& schedule, Action::State& action_state, WellTestState& wtest_state, SummaryState& st, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, double dt, EclipseIO& io) const {
-    double start_time = schedule.seconds(report_step - 1);
-    double end_time = schedule.seconds(report_step);
+void msim::run_step(WellTestState& wtest_state, UDQState& udq_state, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& group_nwrk_data, size_t report_step, double dt, EclipseIO& io) {
+    double start_time = this->schedule.seconds(report_step - 1);
+    double end_time = this->schedule.seconds(report_step);
     double seconds_elapsed = start_time;
 
     while (seconds_elapsed < end_time) {
@@ -112,11 +110,11 @@ void msim::run_step(const Schedule& schedule, Action::State& action_state, WellT
         if ((seconds_elapsed + time_step) > end_time)
             time_step = end_time - seconds_elapsed;
 
-        this->simulate(schedule, wtest_state, st, sol, well_data, group_nwrk_data, report_step, seconds_elapsed, time_step);
+        this->simulate(sol, well_data, group_nwrk_data, report_step, seconds_elapsed, time_step);
 
         seconds_elapsed += time_step;
 
-        io.summary().eval(st,
+        io.summary().eval(this->st,
                           report_step,
                           seconds_elapsed,
                           well_data,
@@ -126,11 +124,9 @@ void msim::run_step(const Schedule& schedule, Action::State& action_state, WellT
                           {},
                           {});
 
-        schedule.getUDQConfig( report_step ).eval(report_step, schedule.wellMatcher(report_step), st, udq_state);
+        this->schedule.getUDQConfig( report_step ).eval(report_step, schedule.wellMatcher(report_step), this->st, udq_state);
 
-        this->output(action_state,
-                     wtest_state,
-                     st,
+        this->output(wtest_state,
                      udq_state,
                      report_step,
                      (seconds_elapsed < end_time),
@@ -144,11 +140,11 @@ void msim::run_step(const Schedule& schedule, Action::State& action_state, WellT
 
 
 
-void msim::output(Action::State& action_state, WellTestState& wtest_state, SummaryState& st, const UDQState& udq_state, size_t report_step, bool substep, double seconds_elapsed, const data::Solution& sol, const data::Wells& well_data, const data::GroupAndNetworkValues& group_nwrk_data, EclipseIO& io) const {
+void msim::output(WellTestState& wtest_state, const UDQState& udq_state, size_t report_step, bool substep, double seconds_elapsed, const data::Solution& sol, const data::Wells& well_data, const data::GroupAndNetworkValues& group_nwrk_data, EclipseIO& io) {
     RestartValue value(sol, well_data, group_nwrk_data, {});
-    io.writeTimeStep(action_state,
+    io.writeTimeStep(this->action_state,
                      wtest_state,
-                     st,
+                     this->st,
                      udq_state,
                      report_step,
                      substep,
@@ -157,15 +153,15 @@ void msim::output(Action::State& action_state, WellTestState& wtest_state, Summa
 }
 
 
-void msim::simulate(const Schedule& schedule, WellTestState&, const SummaryState& st, data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& /* group_nwrk_data */, size_t report_step, double seconds_elapsed, double time_step) const {
+void msim::simulate(data::Solution& sol, data::Wells& well_data, data::GroupAndNetworkValues& /* group_nwrk_data */, size_t report_step, double seconds_elapsed, double time_step) {
     for (const auto& sol_pair : this->solutions) {
         auto func = sol_pair.second;
-        func(this->state, schedule, sol, report_step, seconds_elapsed + time_step);
+        func(this->state, this->schedule, sol, report_step, seconds_elapsed + time_step);
     }
 
     for (const auto& well_pair : this->well_rates) {
         const std::string& well_name = well_pair.first;
-        const auto& sched_well = schedule.getWell(well_name, report_step);
+        const auto& sched_well = this->schedule.getWell(well_name, report_step);
         bool well_open = (sched_well.getStatus() == Well::Status::OPEN);
 
         data::Well& well = well_data[well_name];
@@ -174,7 +170,7 @@ void msim::simulate(const Schedule& schedule, WellTestState&, const SummaryState
             auto func = rate_pair.second;
 
             if (well_open)
-                well.rates.set(rate, func(this->state, schedule, st, sol, report_step, seconds_elapsed + time_step));
+                well.rates.set(rate, func(this->state, this->schedule, this->st, sol, report_step, seconds_elapsed + time_step));
             else
                 well.rates.set(rate, 0.0);
         }

opm/common/ErrorMacros.hpp

@@ -49,22 +49,22 @@
 // std::runtime_error.
 //
 // Usage: OPM_THROW(ExceptionClass, "Error message " << value);
-#define OPM_THROW(Exception, message)                                   \
-    do {                                                                \
-        std::ostringstream oss__;                                       \
-        oss__ << "[" << __FILE__ << ":" << __LINE__ << "] " << message; \
-        ::Opm::OpmLog::error(oss__.str());                                \
-        throw Exception(oss__.str());                                   \
+#define OPM_THROW(Exception, message)                                                        \
+    do {                                                                                     \
+        std::ostringstream opmErrorMacroOStringStream;                                       \
+        opmErrorMacroOStringStream << "[" << __FILE__ << ":" << __LINE__ << "] " << message; \
+        ::Opm::OpmLog::error(opmErrorMacroOStringStream.str());                              \
+        throw Exception(opmErrorMacroOStringStream.str());                                   \
     } while (false)
 
 // Same as OPM_THROW, except for not making an OpmLog::error() call.
 //
 // Usage: OPM_THROW_NOLOG(ExceptionClass, "Error message " << value);
-#define OPM_THROW_NOLOG(Exception, message)                             \
-    do {                                                                \
-        std::ostringstream oss__;                                       \
-        oss__ << "[" << __FILE__ << ":" << __LINE__ << "] " << message; \
-        throw Exception(oss__.str());                                   \
+#define OPM_THROW_NOLOG(Exception, message)                                                  \
+    do {                                                                                     \
+        std::ostringstream opmErrorMacroOStringStream;                                       \
+        opmErrorMacroOStringStream << "[" << __FILE__ << ":" << __LINE__ << "] " << message; \
+        throw Exception(opmErrorMacroOStringStream.str());                                   \
     } while (false)
 
 // throw an exception if a condition is true

opm/common/OpmLog/KeywordLocation.hpp

@@ -53,7 +53,7 @@ public:
 
     std::string format(const std::string& msg_fmt) const;
 
-    static KeywordLocation serializeObject()
+    static KeywordLocation serializationTestObject()
     {
         KeywordLocation result;
         result.keyword = "KW";

opm/common/OpmLog/StreamLog.hpp

@@ -21,7 +21,6 @@
 #define STREAMLOG_H
 
 #include <fstream>
-#include <iostream>
 #include <cstdint>
 
 #include <opm/common/OpmLog/LogBackend.hpp>

opm/common/utility/ActiveGridCells.hpp

@@ -19,9 +19,10 @@
 #ifndef ACTIVEGRIDCELLS_HPP
 #define ACTIVEGRIDCELLS_HPP
 
-#include <opm/parser/eclipse/EclipseState/Grid/GridDims.hpp>
+#include <opm/input/eclipse/EclipseState/Grid/GridDims.hpp>
 
 #include <array>
+#include <vector>
 
 namespace Opm
 {
@@ -69,6 +70,7 @@ public:
     /// \param k The index in the k direction
     /// \return The local index or -1 if the cell is inactive
     int localCell(std::size_t i, std::size_t j, std::size_t k) const;
+
 protected:
     /// \brief Maps the cartesian index to a compressed local index.
     ///

opm/common/utility/FileSystem.hpp

@@ -19,31 +19,15 @@
 #ifndef OPM_FILESYSTEM_HPP
 #define OPM_FILESYSTEM_HPP
 
-#if __cplusplus < 201703L || \
-    (defined(__GNUC__) && __GNUC__ < 8 && !defined(__clang__))
-#include <experimental/filesystem>
-#else
 #include <filesystem>
-#endif
 
 #include <string>
 
 
 namespace Opm
 {
-#if __cplusplus < 201703L || \
-    (defined(__GNUC__) && __GNUC__ < 8 && !defined(__clang__))
-    namespace filesystem = std::experimental::filesystem;
-    filesystem::path proximate(const filesystem::path& p,
-                               const filesystem::path& base = filesystem::current_path());
-#else
-    namespace filesystem = std::filesystem;
-    using filesystem::proximate;
-#endif
-
     // A poor man's filesystem::unique_path
     std::string unique_path(const std::string& input);
-
 } // end namespace Opm
 
 

opm/common/utility/Serializer.hpp

@@ -1,11 +1,9 @@
 /*
-  Copyright 2020 Equinor ASA.
-
   This file is part of the Open Porous Media project (OPM).
 
   OPM is free software: you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by
-  the Free Software Foundation, either version 3 of the License, or
+  the Free Software Foundation, either version 2 of the License, or
   (at your option) any later version.
 
   OPM is distributed in the hope that it will be useful,
@@ -15,122 +13,513 @@
 
   You should have received a copy of the GNU General Public License
   along with OPM.  If not, see <http://www.gnu.org/licenses/>.
+
+  Consult the COPYING file in the top-level source directory of this
+  module for the precise wording of the license and the list of
+  copyright holders.
 */
+#ifndef SERIALIZER_HPP
+#define SERIALIZER_HPP
 
-#ifndef OPM_SERIALIZER_HPP
-#define OPM_SERIALIZER_HPP
-
-#include <cstring>
-#include <string>
+#include <algorithm>
+#include <functional>
+#include <map>
+#include <memory>
+#include <optional>
+#include <set>
+#include <type_traits>
+#include <utility>
 #include <unordered_map>
+#include <unordered_set>
+#include <variant>
 #include <vector>
 
 namespace Opm {
-/*
-  This is a very basic serialization class used to support serialization of
-  small state objects from opm common. The main serialization code used in
-  opm/flow is initiated and controlled from the restart code, and therefor
-  slightly cumbersome to use for objects which should be serialized not as part
-  of the restart code.
-*/
+namespace detail {
 
+template<typename ...Ts>
+struct MakeVariantImpl
+{
 
-class Serializer {
-public:
-    Serializer() = default;
-    explicit Serializer(const std::vector<char>& buffer_arg) :
-        buffer(buffer_arg)
-    {}
+template<std::size_t Index, typename, typename ...Rest>
+static decltype(auto) make_variant(std::size_t index)
+{
+  if(Index == index)
+    return std::variant<Ts...>{std::in_place_index_t<Index>{}};
 
+  if constexpr(sizeof...(Rest) != 0)
+    return make_variant<Index + 1, Rest...>(index);
+  else
+    throw std::runtime_error("Invalid variant index");
+}
 
-    template <typename T>
-    void put(const T& value) {
-        this->pack(std::addressof(value), sizeof(T));
-    }
-
-    template <typename T>
-    void put(const T* ) {
-        throw std::logic_error("Serializer can not pack pointers");
-    }
-
-    template <typename T>
-    T get() {
-        T value;
-        std::memcpy(&value, &this->buffer[this->read_pos], sizeof(T));
-        this->read_pos += sizeof(T);
-        return value;
-    }
-
-    template<typename T>
-    void put_vector(const std::vector<T>& values) {
-        this->put(values.size());
-        this->pack(values.data(), values.size() * sizeof(T));
-    }
-
-
-
-    template<typename T>
-    std::vector<T> get_vector() {
-        std::size_t size = this->get<std::size_t>();
-        std::vector<T> values(size);
-        for (std::size_t index=0; index < size; index++)
-            values[index] = this->get<T>();
-
-        return values;
-    }
-
-    template<typename K, typename T>
-    void put_map(const std::unordered_map<K,T>& values) {
-        this->put(values.size());
-        for (const auto& value_pair : values) {
-            this->put(value_pair.first);
-            this->put(value_pair.second);
-        }
-    }
-
-    template<typename K, typename T>
-    std::unordered_map<K,T> get_map() {
-        std::unordered_map<K,T> values;
-        auto size = this->get<std::size_t>();
-        for (std::size_t index = 0; index < size; index++) {
-            auto key = this->get<K>();
-            auto value = this->get<T>();
-            values.insert( std::make_pair(key,value) );
-        }
-        return values;
-    }
-
-
-    std::vector<char> buffer;
-private:
-    void pack(const void * ptr, std::size_t value_size) {
-        std::size_t write_pos = this->buffer.size();
-        std::size_t new_size = write_pos + value_size;
-        this->buffer.resize( new_size );
-        std::memcpy(&this->buffer[write_pos], ptr, value_size);
-    }
-
-    std::size_t read_pos = 0;
 };
 
-template <>
-void inline Serializer::put(const std::string& value) {
-    this->put(value.size());
-    if (value.empty())
-        return;
-
-    this->pack(value.c_str(), value.size());
+template<typename ...Ts>
+decltype(auto) make_variant(std::size_t index)
+{
+  return detail::MakeVariantImpl<Ts...>::template make_variant<0, Ts...>(index);
 }
 
-template<>
-std::string inline Serializer::get<std::string>() {
-    std::string::size_type length = this->get<std::string::size_type>();
-    if (length == 0)
-        return std::string{};
+template<class T>
+using remove_cvr_t = std::remove_cv_t<std::remove_reference_t<T>>;
 
-    this->read_pos += length;
-    return {std::addressof(this->buffer[this->read_pos - length]), length};
-}
+} // namespace detail
+
+/*! \brief Class for (de-)serializing.
+ *!  \details If the class has a serializeOp member this is used,
+ *            if not it is passed on to the underlying packer.
+*/
+
+template<class Packer>
+class Serializer {
+public:
+    //! \brief Constructor.
+    //! \param packer Packer to use
+    explicit Serializer(const Packer& packer) :
+        m_packer(packer)
+    {}
+
+    //! \brief Applies current serialization op to the passed data.
+    template<class T>
+    void operator()(const T& data)
+    {
+        if constexpr (is_ptr<T>::value) {
+            ptr(data);
+        } else if constexpr (is_pair_or_tuple<T>::value) {
+            tuple(data);
+        } else if constexpr (is_variant<T>::value) {
+            variant(data);
+        } else if constexpr (is_optional<T>::value) {
+            optional(data);
+        } else if constexpr (is_vector<T>::value) {
+            vector(data);
+        } else if constexpr (is_map<T>::value) {
+            map(data);
+        } else if constexpr (is_array<T>::value) {
+            array(data);
+        } else if constexpr (is_set<T>::value) {
+            set(data);
+        } else if constexpr (has_serializeOp<detail::remove_cvr_t<T>>::value) {
+            const_cast<T&>(data).serializeOp(*this);
+        } else {
+            if (m_op == Operation::PACKSIZE)
+                m_packSize += m_packer.packSize(data);
+            else if (m_op == Operation::PACK)
+                m_packer.pack(data, m_buffer, m_position);
+            else if (m_op == Operation::UNPACK)
+                m_packer.unpack(const_cast<T&>(data), m_buffer, m_position);
+        }
+    }
+
+    //! \brief Call this to serialize data.
+    //! \tparam T Type of class to serialize
+    //! \param data Class to serialize
+    template<class T>
+    void pack(const T& data)
+    {
+        m_op = Operation::PACKSIZE;
+        m_packSize = 0;
+        (*this)(data);
+        m_position = 0;
+        m_buffer.resize(m_packSize);
+        m_op = Operation::PACK;
+        (*this)(data);
+    }
+
+    //! \brief Call this to serialize data.
+    //! \tparam T Type of class to serialize
+    //! \param data Class to serialize
+    template<class... Args>
+    void pack(const Args&... data)
+    {
+        m_op = Operation::PACKSIZE;
+        m_packSize = 0;
+        variadic_call(data...);
+        m_position = 0;
+        m_buffer.resize(m_packSize);
+        m_op = Operation::PACK;
+        variadic_call(data...);
+    }
+
+    //! \brief Call this to de-serialize data.
+    //! \tparam T Type of class to de-serialize
+    //! \param data Class to de-serialize
+    template<class T>
+    void unpack(T& data)
+    {
+        m_position = 0;
+        m_op = Operation::UNPACK;
+        (*this)(data);
+    }
+
+    //! \brief Call this to de-serialize data.
+    //! \tparam T Type of class to de-serialize
+    //! \param data Class to de-serialize
+    template<class... Args>
+    void unpack(Args&... data)
+    {
+        m_position = 0;
+        m_op = Operation::UNPACK;
+        variadic_call(data...);
+    }
+
+    //! \brief Returns current position in buffer.
+    size_t position() const
+    {
+        return m_position;
+    }
+
+    //! \brief Returns true if we are currently doing a serialization operation.
+    bool isSerializing() const
+    {
+        return m_op != Operation::UNPACK;
+    }
+
+protected:
+    //! \brief Handler for vectors.
+    //! \tparam T Type for vector elements
+    //! \param data The vector to (de-)serialize
+    template <typename T>
+    void vector(const std::vector<T>& data)
+    {
+        if constexpr (std::is_pod_v<T>) {
+          if (m_op == Operation::PACKSIZE) {
+              (*this)(data.size());
+              m_packSize += m_packer.packSize(data.data(), data.size());
+          } else if (m_op == Operation::PACK) {
+              (*this)(data.size());
+              m_packer.pack(data.data(), data.size(), m_buffer, m_position);
+          } else if (m_op == Operation::UNPACK) {
+              std::size_t size = 0;
+              (*this)(size);
+              auto& data_mut = const_cast<std::vector<T>&>(data);
+              data_mut.resize(size);
+              m_packer.unpack(data_mut.data(), size, m_buffer, m_position);
+          }
+        } else {
+            if (m_op == Operation::UNPACK) {
+                std::size_t size = 0;
+                (*this)(size);
+                auto& data_mut = const_cast<std::vector<T>&>(data);
+                data_mut.resize(size);
+                std::for_each(data_mut.begin(), data_mut.end(), std::ref(*this));
+            } else {
+                (*this)(data.size());
+                std::for_each(data.begin(), data.end(), std::ref(*this));
+            }
+        }
+    }
+
+    //! \brief Handler for bool vectors.
+    //! \param data The vector to (de-)serialize
+    void vector(const std::vector<bool>& data)
+    {
+        if (m_op == Operation::UNPACK) {
+            std::size_t size = 0;
+            (*this)(size);
+            auto& data_mut = const_cast<std::vector<bool>&>(data);
+            data_mut.clear();
+            data_mut.reserve(size);
+            for (size_t i = 0; i < size; ++i) {
+                bool entry = false;
+                (*this)(entry);
+                data_mut.push_back(entry);
+            }
+        } else {
+            (*this)(data.size());
+            for (const auto entry : data) { // Not a reference: vector<bool> range
+                bool b = entry;
+                (*this)(b);
+            }
+        }
+    }
+
+    //! \brief Handler for arrays.
+    //! \param data The array to (de-)serialize
+    template <class Array>
+    void array(const Array& data)
+    {
+        using T = typename Array::value_type;
+
+        if constexpr (std::is_pod_v<T>) {
+            if (m_op == Operation::PACKSIZE)
+                m_packSize += m_packer.packSize(data.data(), data.size());
+            else if (m_op == Operation::PACK)
+                m_packer.pack(data.data(), data.size(), m_buffer, m_position);
+            else if (m_op == Operation::UNPACK) {
+                auto& data_mut = const_cast<Array&>(data);
+                m_packer.unpack(data_mut.data(), data_mut.size(), m_buffer, m_position);
+            }
+        } else {
+            std::for_each(data.begin(), data.end(), std::ref(*this));
+        }
+    }
+
+    //! \brief Handler for std::variant.
+    //! \param data The variant to (de-)serialize
+    template<class... Args>
+    void variant(const std::variant<Args...>& data)
+    {
+        if (m_op == Operation::UNPACK) {
+            std::size_t index = 0;
+            (*this)(index);
+            auto& data_mut = const_cast<std::variant<Args...>&>(data);
+            data_mut = detail::make_variant<Args...>(index);
+            std::visit(std::ref(*this), data_mut);
+        } else {
+            (*this)(data.index());
+            std::visit(std::ref(*this), data);
+        }
+    }
+
+    //! \brief Handler for std::optional.
+    //! \tparam T Type for data
+    //! \param data The optional to (de-)serialize
+    template<class T>
+    void optional(const std::optional<T>& data)
+    {
+        if (m_op == Operation::UNPACK) {
+            bool has = false;
+            (*this)(has);
+            if (has) {
+                T res;
+                (*this)(res);
+                const_cast<std::optional<T>&>(data) = res;
+            }
+        } else {
+            (*this)(data.has_value());
+            if (data.has_value()) {
+                (*this)(*data);
+            }
+        }
+    }
+
+    //! \brief Handler for std::tuple.
+    //! \param data The tuple to (de-)serialize
+    template<class Tuple>
+    void tuple(const Tuple& data)
+    {
+        tuple_call(data);
+    }
+
+    //! \brief Handler for maps.
+    //! \tparam Map map type
+    //! \param map The map to (de-)serialize
+    template<class Map>
+    void map(const Map& data)
+    {
+        if (m_op == Operation::UNPACK) {
+            std::size_t size = 0;
+            (*this)(size);
+            auto& data_mut = const_cast<Map&>(data);
+            for (size_t i = 0; i < size; ++i) {
+                typename Map::value_type entry;
+                (*this)(entry);
+                data_mut.insert(entry);
+            }
+        } else {
+            (*this)(data.size());
+            std::for_each(data.begin(), data.end(), std::ref(*this));
+        }
+    }
+
+    //! \brief Handler for sets.
+    //! \tparam Set set type
+    //! \param data The set to (de-)serialize
+    template<class Set>
+    void set(const Set& data)
+    {
+        if (m_op == Operation::UNPACK) {
+            std::size_t size = 0;
+            (*this)(size);
+            auto& data_mut = const_cast<Set&>(data);
+            for (size_t i = 0; i < size; ++i) {
+                typename Set::value_type entry;
+                (*this)(entry);
+                data_mut.insert(entry);
+            }
+        } else {
+            (*this)(data.size());
+            std::for_each(data.begin(), data.end(), std::ref(*this));
+        }
+    }
+
+    template<typename T, typename... Args>
+    void variadic_call(T& first,
+                       Args&&... args)
+    {
+      (*this)(first);
+      if constexpr (sizeof...(args) > 0)
+          variadic_call(std::forward<Args>(args)...);
+    }
+
+    template<std::size_t I = 0, typename Tuple>
+    typename std::enable_if<I == std::tuple_size<Tuple>::value, void>::type
+    tuple_call(const Tuple&)
+    {
+    }
+
+    template<std::size_t I = 0, typename Tuple>
+    typename std::enable_if<I != std::tuple_size<Tuple>::value, void>::type
+    tuple_call(const Tuple& tuple)
+    {
+        (*this)(std::get<I>(tuple));
+        tuple_call<I+1>(tuple);
+    }
+
+    //! \brief Enumeration of operations.
+    enum class Operation {
+        PACKSIZE, //!< Calculating serialization buffer size
+        PACK,     //!< Performing serialization
+        UNPACK    //!< Performing de-serialization
+    };
+
+    //! \brief Predicate for detecting vectors.
+    template<class T>
+    struct is_vector {
+        constexpr static bool value = false;
+    };
+
+    template<class T1, class Allocator>
+    struct is_vector<std::vector<T1,Allocator>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for detecting variants.
+    template<class T>
+    struct is_variant {
+        constexpr static bool value = false;
+    };
+
+    template<class... Ts>
+    struct is_variant<std::variant<Ts...>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for detecting pairs and tuples.
+    template<class T>
+    struct is_pair_or_tuple {
+        constexpr static bool value = false;
+    };
+
+    template<class... Ts>
+    struct is_pair_or_tuple<std::tuple<Ts...>> {
+        constexpr static bool value = true;
+    };
+
+    template<class T1, class T2>
+    struct is_pair_or_tuple<std::pair<T1,T2>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for smart pointers.
+    template<class T>
+    struct is_ptr {
+        constexpr static bool value = false;
+    };
+
+    template<class T1>
+    struct is_ptr<std::shared_ptr<T1>> {
+        constexpr static bool value = true;
+    };
+
+    template<class T1, class Deleter>
+    struct is_ptr<std::unique_ptr<T1, Deleter>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for std::optional.
+    template<class T>
+    struct is_optional {
+        constexpr static bool value = false;
+    };
+
+    template<class T1>
+    struct is_optional<std::optional<T1>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for maps
+    template<class T>
+    struct is_map {
+        constexpr static bool value = false;
+    };
+
+    template<class Key, class T, class Compare, class Allocator>
+    struct is_map<std::map<Key,T,Compare,Allocator>> {
+        constexpr static bool value = true;
+    };
+
+    template<class Key, class T, class Hash, class KeyEqual, class Allocator>
+    struct is_map<std::unordered_map<Key,T,Hash,KeyEqual,Allocator>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for sets
+    template<class T>
+    struct is_set {
+        constexpr static bool value = false;
+    };
+
+    template<class Key, class Compare, class Allocator>
+    struct is_set<std::set<Key,Compare,Allocator>> {
+        constexpr static bool value = true;
+    };
+
+    template<class Key, class Hash, class KeyEqual, class Allocator>
+    struct is_set<std::unordered_set<Key,Hash,KeyEqual,Allocator>> {
+        constexpr static bool value = true;
+    };
+
+    //! \brief Predicate for arrays
+    template<class T>
+    struct is_array {
+        constexpr static bool value = false;
+    };
+
+    template<class T, std::size_t N>
+    struct is_array<std::array<T,N>> {
+        constexpr static bool value = true;
+    };
+
+    //! Detect existence of \c serializeOp member function
+    //!
+    //! Base case (no \c serializeOp member function)
+    template <typename, class = void>
+    struct has_serializeOp : public std::false_type {};
+
+    //! Detect existence of \c serializeOp member function
+    //!
+    //! Non-default, albeit common, case (type has \c serializeOp member
+    //! function)
+    template <typename T>
+    struct has_serializeOp<
+        T, std::void_t<decltype(std::declval<T>().serializeOp(std::declval<Serializer<Packer>&>()))>
+    > : public std::true_type {};
+
+    //! \brief Handler for smart pointers.
+    template<class PtrType>
+    void ptr(const PtrType& data)
+    {
+        using T1 = typename PtrType::element_type;
+        bool value = data ? true : false;
+        (*this)(value);
+        if (m_op == Operation::UNPACK && value) {
+            const_cast<PtrType&>(data).reset(new T1);
+        }
+        if (data) {
+            (*this)(*data);
+        }
+    }
+
+    const Packer& m_packer; //!< Packer to use
+    Operation m_op = Operation::PACKSIZE; //!< Current operation
+    size_t m_packSize = 0; //!< Required buffer size after PACKSIZE has been done
+    int m_position = 0; //!< Current position in buffer
+    std::vector<char> m_buffer; //!< Buffer for serialized data
+};
 
 }
+
 #endif

opm/common/utility/TimeService.hpp

@@ -24,7 +24,7 @@
 #include <ctime>
 #include <string>
 #include <unordered_map>
-#include <opm/parser/eclipse/Deck/DeckRecord.hpp>
+#include <opm/input/eclipse/Deck/DeckRecord.hpp>
 
 
 namespace Opm {
@@ -45,6 +45,7 @@ namespace Opm {
 
     std::time_t mkdatetime(int in_year, int in_month, int in_day, int hour, int minute, int second);
     std::time_t mkdate(int in_year, int in_month, int in_day);
+    std::time_t portable_timegm(const std::tm* t);
     std::time_t timeFromEclipse(const DeckRecord &dateRecord);
     }
 
@@ -103,7 +104,7 @@ namespace Opm {
         template<class Serializer>
         void serializeOp(Serializer& serializer)
         {
-            ymd_.serializeOp(serializer);
+            serializer(ymd_);
             serializer(hour_);
             serializer(minutes_);
             serializer(seconds_);

opm/common/utility/numeric/UniformTableLinear.hpp

@@ -24,7 +24,7 @@
 #include <exception>
 #include <vector>
 #include <utility>
-#include <iostream>
+#include <ostream>
 
 #include <opm/common/ErrorMacros.hpp>
 

opm/common/utility/shmatch.hpp

@@ -0,0 +1,37 @@
+/*
+  Copyright 2022 Equinor ASA.
+
+  This file is part of the Open Porous Media project (OPM).
+
+  OPM is free software: you can redistribute it and/or modify
+  it under the terms of the GNU General Public License as published by
+  the Free Software Foundation, either version 3 of the License, or
+  (at your option) any later version.
+
+  OPM is distributed in the hope that it will be useful,
+  but WITHOUT ANY WARRANTY; without even the implied warranty of
+  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+  GNU General Public License for more details.
+
+  You should have received a copy of the GNU General Public License
+  along with OPM.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
+#ifndef OPM_UTILITY_SHMATCH_HPP
+#define OPM_UTILITY_SHMATCH_HPP
+
+#include <string>
+
+namespace Opm {
+
+/*
+  The shmatch() function is an implementation of the shell matching algorithm
+  used in posix function fnmatch(). It is implemented here based on std::regex
+  to avoid using a posix function.
+*/
+
+bool shmatch(const std::string& pattern, const std::string& symbol);
+
+
+}
+#endif //OPM_UTILITY_STRING_HPP

opm/input/eclipse/Deck/Deck.hpp

@@ -20,16 +20,18 @@
 #ifndef DECK_HPP
 #define DECK_HPP
 
+#include <functional>
+#include <iosfwd>
 #include <map>
 #include <memory>
-#include <ostream>
 #include <optional>
 #include <vector>
 #include <string>
 
-#include <opm/parser/eclipse/Deck/DeckTree.hpp>
-#include <opm/parser/eclipse/Deck/DeckKeyword.hpp>
-#include <opm/parser/eclipse/Units/UnitSystem.hpp>
+#include <opm/input/eclipse/Deck/DeckView.hpp>
+#include <opm/input/eclipse/Deck/DeckTree.hpp>
+#include <opm/input/eclipse/Deck/DeckKeyword.hpp>
+#include <opm/input/eclipse/Units/UnitSystem.hpp>
 
 #ifdef OPM_PARSER_DECK_API_WARNING
 #ifndef OPM_PARSER_DECK_API
@@ -56,85 +58,18 @@ namespace Opm {
      */
     class DeckOutput;
 
-    class DeckView {
+
+
+    class Deck {
         public:
-            typedef std::vector< DeckKeyword >::const_iterator const_iterator;
-
-            bool hasKeyword( const DeckKeyword& keyword ) const;
-            bool hasKeyword( const std::string& keyword ) const;
-            template< class Keyword >
-            bool hasKeyword() const {
-                return hasKeyword( Keyword::keywordName );
-            }
-
-            const DeckKeyword& getKeyword( const std::string& keyword, size_t index ) const;
-            const DeckKeyword& getKeyword( const std::string& keyword ) const;
-            const DeckKeyword& getKeyword( size_t index ) const;
-
-            const DeckKeyword& operator[](std::size_t index) const;
-            DeckKeyword& getKeyword( size_t index );
-            template< class Keyword >
-            const DeckKeyword& getKeyword() const {
-                return getKeyword( Keyword::keywordName );
-            }
-            template< class Keyword >
-            const DeckKeyword& getKeyword( size_t index ) const {
-                return getKeyword( Keyword::keywordName, index );
-            }
-            template< class Keyword >
-            std::size_t count() const {
-                return count( Keyword::keywordName );
-            }
-
-            const std::vector< const DeckKeyword* > getKeywordList( const std::string& keyword ) const;
-            template< class Keyword >
-            const std::vector< const DeckKeyword* > getKeywordList() const {
-                return getKeywordList( Keyword::keywordName );
-            }
-
-            size_t count(const std::string& keyword) const;
-            size_t size() const;
-
-            const_iterator begin() const;
-            const_iterator end() const;
-
-
-        protected:
-            void add( const DeckKeyword*, const_iterator, const_iterator );
-
-            const std::vector< size_t >& offsets( const std::string& ) const;
-
-            DeckView( const_iterator first, const_iterator last );
-            explicit DeckView( std::pair< const_iterator, const_iterator > );
-            DeckView() = default;
-            void init( const_iterator, const_iterator );
-
-        private:
-            const_iterator first;
-            const_iterator last;
-            std::map< std::string, std::vector< size_t > > keywordMap;
-
-    };
-
-    class Deck : private DeckView {
-        public:
-            using DeckView::const_iterator;
-            using DeckView::hasKeyword;
-            using DeckView::getKeyword;
-            using DeckView::getKeywordList;
-            using DeckView::count;
-            using DeckView::size;
-            using DeckView::begin;
-            using DeckView::end;
-            using DeckView::operator[];
-
             using iterator = std::vector< DeckKeyword >::iterator;
+            using const_iterator = std::vector< DeckKeyword >::const_iterator;
 
-            Deck();
+            Deck() = default;
             Deck( const Deck& );
             Deck( Deck&& );
 
-            static Deck serializeObject();
+            static Deck serializationTestObject();
 
             Deck& operator=(const Deck& rhs);
             bool operator==(const Deck& data) const;
@@ -142,8 +77,6 @@ namespace Opm {
             void addKeyword( DeckKeyword&& keyword );
             void addKeyword( const DeckKeyword& keyword );
 
-            DeckKeyword& getKeyword( size_t );
-
             const UnitSystem& getDefaultUnitSystem() const;
             const UnitSystem& getActiveUnitSystem() const;
             UnitSystem& getActiveUnitSystem();
@@ -163,31 +96,68 @@ namespace Opm {
             iterator end();
             void write( DeckOutput& output ) const ;
             friend std::ostream& operator<<(std::ostream& os, const Deck& deck);
+            const_iterator begin() const;
+            const_iterator end() const;
+
+            Opm::DeckView operator[](const std::string& keyword) const;
+            const DeckKeyword& operator[](std::size_t index) const;
+
+            template< class Keyword >
+            Opm::DeckView get() const {
+                return this->operator[](Keyword::keywordName);
+            }
+
+            std::vector< const DeckKeyword* > getKeywordList( const std::string& keyword ) const;
+            template< class Keyword >
+            std::vector< const DeckKeyword* > getKeywordList() const {
+                return getKeywordList( Keyword::keywordName );
+            }
 
             template<class Serializer>
             void serializeOp(Serializer& serializer)
             {
-                serializer.vector(keywordList);
-                defaultUnits.serializeOp(serializer);
+                serializer(keywordList);
+                serializer(defaultUnits);
                 serializer(activeUnits);
                 serializer(m_dataFile);
                 serializer(input_path);
                 serializer(unit_system_access_count);
-                if (!serializer.isSerializing())
-                  this->init(this->keywordList.begin(), this->keywordList.end());
             }
 
+            bool hasKeyword( const std::string& keyword ) const;
+
+            template< class Keyword >
+            bool hasKeyword() const {
+                return this->hasKeyword( Keyword::keywordName );
+            }
+
+
+
+            const std::vector<std::size_t> index(const std::string& keyword) const {
+                return this->global_view().index(keyword);
+            }
+
+            template< class Keyword >
+            std::size_t count() const {
+                return count( Keyword::keywordName );
+            }
+            size_t count(const std::string& keyword) const;
+
+
+
         private:
-            Deck(std::vector<DeckKeyword>&& keywordList);
 
             std::vector< DeckKeyword > keywordList;
             UnitSystem defaultUnits;
-            std::unique_ptr<UnitSystem> activeUnits;
+            std::optional<UnitSystem> activeUnits;
 
             std::optional<std::string> m_dataFile;
             std::string input_path;
             DeckTree file_tree;
             mutable std::size_t unit_system_access_count = 0;
+
+            const DeckView& global_view() const;
+            mutable std::unique_ptr<DeckView> m_global_view{nullptr};
     };
 }
 #endif  /* DECK_HPP */

opm/input/eclipse/Deck/DeckItem.hpp

@@ -23,12 +23,12 @@
 #include <string>
 #include <vector>
 #include <memory>
-#include <ostream>
+#include <iosfwd>
 
-#include <opm/parser/eclipse/Units/Dimension.hpp>
-#include <opm/parser/eclipse/Utility/Typetools.hpp>
-#include <opm/parser/eclipse/Deck/UDAValue.hpp>
-#include <opm/parser/eclipse/Deck/value_status.hpp>
+#include <opm/input/eclipse/Units/Dimension.hpp>
+#include <opm/input/eclipse/Utility/Typetools.hpp>
+#include <opm/input/eclipse/Deck/UDAValue.hpp>
+#include <opm/input/eclipse/Deck/value_status.hpp>
 
 
 namespace Opm {
@@ -46,7 +46,7 @@ namespace Opm {
         DeckItem( const std::string&, UDAValue, const std::vector<Dimension>& active_dim, const std::vector<Dimension>& default_dim);
         DeckItem( const std::string&, double, const std::vector<Dimension>& active_dim, const std::vector<Dimension>& default_dim);
 
-        static DeckItem serializeObject();
+        static DeckItem serializationTestObject();
 
         const std::string& name() const;
 
@@ -113,7 +113,7 @@ namespace Opm {
           account, i.e. two items will compare differently if one is
           defaulted and the other has the default value explicitly
           set. The default behaviour is cmp_default == false -
-          itrespective of whether they have been set explicitly or
+          irrespective of whether they have been set explicitly or
           have been defaulted.
         */
         bool equal(const DeckItem& other, bool cmp_default, bool cmp_numeric) const;
@@ -130,6 +130,7 @@ namespace Opm {
         bool is_double() { return  type == get_type< double >(); };
         bool is_int() { return  type == get_type< int >() ; };
         bool is_string() { return  type == get_type< std::string >(); };
+        bool is_raw_string() { return  type == get_type< RawString >(); };
 
         UDAValue& get_uda() { return uval[0]; };
 
@@ -139,14 +140,14 @@ namespace Opm {
             serializer(dval);
             serializer(ival);
             serializer(sval);
-            serializer.vector(rsval);
-            serializer.vector(uval);
+            serializer(rsval);
+            serializer(uval);
             serializer(type);
             serializer(item_name);
-            serializer.template vector<value::status, false>(value_status);
+            serializer(value_status);
             serializer(raw_data);
-            serializer.vector(active_dimensions);
-            serializer.vector(default_dimensions);
+            serializer(active_dimensions);
+            serializer(default_dimensions);
         }
 
         void reserve_additionalRawString(std::size_t);

opm/input/eclipse/Deck/DeckKeyword.hpp

@@ -23,8 +23,8 @@
 #include <string>
 #include <vector>
 
-#include <opm/parser/eclipse/Deck/DeckRecord.hpp>
-#include <opm/parser/eclipse/Deck/value_status.hpp>
+#include <opm/input/eclipse/Deck/DeckRecord.hpp>
+#include <opm/input/eclipse/Deck/value_status.hpp>
 #include <opm/common/OpmLog/KeywordLocation.hpp>
 
 namespace Opm {
@@ -46,7 +46,7 @@ namespace Opm {
         DeckKeyword(const ParserKeyword& parserKeyword, const std::vector<int>& data);
         DeckKeyword(const ParserKeyword& parserKeyword, const std::vector<double>& data, const UnitSystem& system_active, const UnitSystem& system_default);
 
-        static DeckKeyword serializeObject();
+        static DeckKeyword serializationTestObject();
 
         const std::string& name() const;
         void setFixedSize();
@@ -77,8 +77,8 @@ namespace Opm {
         void write_TITLE( DeckOutput& output ) const;
 
         template <class Keyword>
-        bool isKeyword() const {
-            if (Keyword::keywordName == m_keywordName)
+        bool is() const {
+            if (Keyword::keywordName == this->m_keywordName)
                 return true;
             else
                 return false;
@@ -97,8 +97,8 @@ namespace Opm {
         void serializeOp(Serializer& serializer)
         {
             serializer(m_keywordName);
-            m_location.serializeOp(serializer);
-            serializer.vector(m_recordList);
+            serializer(m_location);
+            serializer(m_recordList);
             serializer(m_isDataKeyword);
             serializer(m_slashTerminated);
             serializer(m_isDoubleRecordKeyword);

opm/input/eclipse/Deck/DeckOutput.hpp

@@ -20,7 +20,7 @@
 #ifndef DECK_OUTPUT_HPP
 #define DECK_OUTPUT_HPP
 
-#include <ostream>
+#include <iosfwd>
 #include <string>
 #include <cstddef>
 

opm/input/eclipse/Deck/DeckRecord.hpp

@@ -23,9 +23,9 @@
 #include <string>
 #include <vector>
 #include <memory>
-#include <ostream>
+#include <iosfwd>
 
-#include <opm/parser/eclipse/Deck/DeckItem.hpp>
+#include <opm/input/eclipse/Deck/DeckItem.hpp>
 
 namespace Opm {
 
@@ -36,7 +36,7 @@ namespace Opm {
         DeckRecord() = default;
         DeckRecord( std::vector< DeckItem >&& items, const bool check_for_duplicate_names = true );
 
-        static DeckRecord serializeObject();
+        static DeckRecord serializationTestObject();
 
         size_t size() const;
         void addItem( DeckItem deckItem );
@@ -64,8 +64,8 @@ namespace Opm {
         const_iterator begin() const;
         const_iterator end() const;
 
-        void write(DeckOutput& writer) const;
-        void write_data(DeckOutput& writer) const;
+        void write(DeckOutput& writer, std::size_t item_offset = 0) const;
+        void write_data(DeckOutput& writer, std::size_t item_offset = 0) const;
         friend std::ostream& operator<<(std::ostream& os, const DeckRecord& record);
 
         bool equal(const DeckRecord& other, bool cmp_default, bool cmp_numeric) const;
@@ -75,7 +75,7 @@ namespace Opm {
         template<class Serializer>
         void serializeOp(Serializer& serializer)
         {
-            serializer.vector(m_items);
+            serializer(m_items);
         }
 
     private:

opm/input/eclipse/Deck/DeckSection.hpp

@@ -22,10 +22,12 @@
 
 #include <string>
 
-#include <opm/parser/eclipse/Deck/Deck.hpp>
+#include <opm/input/eclipse/Deck/DeckView.hpp>
 
 namespace Opm {
 
+class Deck;
+
 enum class Section {
     RUNSPEC,
     GRID,
@@ -43,7 +45,6 @@ enum class Section {
 
 class DeckSection : public DeckView {
     public:
-        using DeckView::const_iterator;
 
         DeckSection( const Deck& deck, const std::string& startKeyword );
         const std::string& name() const;
@@ -64,6 +65,46 @@ class DeckSection : public DeckView {
                                          const Parser&,
                                          bool ensureKeywordSectionAffiliation = false);
 
+
+        // ---------------------------------------------------------------------------------
+        // Highly deprecated shims
+        const DeckKeyword& getKeyword(const std::string& keyword, std::size_t index) const {
+            auto view = this->operator[](keyword);
+            return view[index];
+        }
+
+        const DeckKeyword& getKeyword(const std::string& keyword) const {
+            auto view = this->operator[](keyword);
+            return view.back();
+        }
+
+
+        std::vector<const DeckKeyword*> getKeywordList(const std::string& keyword) const {
+            std::vector<const DeckKeyword*> kw_list;
+            auto view = this->operator[](keyword);
+            for (const auto& kw : view)
+                kw_list.push_back(&kw);
+            return kw_list;
+        }
+
+        template <class Keyword>
+        std::vector<const DeckKeyword*> getKeywordList() const {
+            return this->getKeywordList(Keyword::keywordName);
+        }
+
+
+        bool hasKeyword(const std::string& keyword) const {
+            return this->has_keyword(keyword);
+        }
+
+        template <class Keyword>
+        bool hasKeyword() const {
+            return this->has_keyword(Keyword::keywordName);
+        }
+
+        // ---------------------------------------------------------------------------------
+
+
     private:
         std::string section_name;
         const UnitSystem& units;
@@ -72,49 +113,41 @@ class DeckSection : public DeckView {
 
     class RUNSPECSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit RUNSPECSection(const Deck& deck) : DeckSection(deck, "RUNSPEC") {}
     };
 
     class GRIDSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit GRIDSection(const Deck& deck) : DeckSection(deck, "GRID") {}
     };
 
     class EDITSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit EDITSection(const Deck& deck) : DeckSection(deck, "EDIT") {}
     };
 
     class PROPSSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit PROPSSection(const Deck& deck) : DeckSection(deck, "PROPS") {}
     };
 
     class REGIONSSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit REGIONSSection(const Deck& deck) : DeckSection(deck, "REGIONS") {}
     };
 
     class SOLUTIONSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit SOLUTIONSection(const Deck& deck) : DeckSection(deck, "SOLUTION") {}
     };
 
     class SUMMARYSection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit SUMMARYSection(const Deck& deck) : DeckSection(deck, "SUMMARY") {}
     };
 
     class SCHEDULESection : public DeckSection {
     public:
-        using DeckSection::const_iterator;
         explicit SCHEDULESection(const Deck& deck) : DeckSection(deck, "SCHEDULE") {}
     };
 }

opm/input/eclipse/Deck/DeckTree.hpp

@@ -23,6 +23,7 @@
 #include <string>
 #include <unordered_map>
 #include <unordered_set>
+#include <optional>
 
 
 namespace Opm {

opm/input/eclipse/Deck/DeckValue.hpp

@@ -22,7 +22,8 @@
 
 #include <string>
 
-#include <opm/parser/eclipse/Utility/Typetools.hpp>
+#include <opm/input/eclipse/Utility/Typetools.hpp>
+#include <opm/input/eclipse/Deck/UDAValue.hpp>
 
 namespace Opm {
 
@@ -33,7 +34,8 @@ class DeckValue {
         explicit DeckValue(int);
         explicit DeckValue(double);
         explicit DeckValue(const std::string&);
-        
+        explicit DeckValue(const UDAValue&);
+
         bool is_default() const;
 
         template<typename T>
@@ -48,7 +50,8 @@ class DeckValue {
         type_tag value_enum;
         int int_value;
         double double_value;
-        std::string string_value;    
+        std::string string_value;
+        UDAValue uda_value;
 
 };
 

opm/input/eclipse/Deck/DeckView.hpp

@@ -0,0 +1,91 @@
+/*
+  Copyright 2021 Statoil ASA.
+
+  This file is part of the Open Porous Media project (OPM).
+
+  OPM is free software: you can redistribute it and/or modify
+  it under the terms of the GNU General Public License as published by
+  the Free Software Foundation, either version 3 of the License, or
+  (at your option) any later version.
+
+  OPM is distributed in the hope that it will be useful,
+  but WITHOUT ANY WARRANTY; without even the implied warranty of
+  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+  GNU General Public License for more details.
+
+  You should have received a copy of the GNU General Public License
+  along with OPM.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
+#ifndef DECKVIEW_HPP
+#define DECKVIEW_HPP
+
+#include <opm/input/eclipse/Deck/DeckKeyword.hpp>
+
+#include <unordered_map>
+
+namespace Opm {
+
+
+class DeckView {
+public:
+    typedef std::vector<std::reference_wrapper<const DeckKeyword>> storage_type;
+
+
+    struct Iterator : public storage_type::iterator {
+        Iterator(storage_type::const_iterator inner_iter) :
+            inner(inner_iter)
+        {}
+
+        const DeckKeyword& operator*()  { return this->inner->get(); }
+        const DeckKeyword* operator->() { return &this->inner->get(); }
+
+        Iterator& operator++()    { ++this->inner; return *this; }
+        Iterator  operator++(int) { auto tmp = *this; ++this->inner; return tmp; }
+
+
+        Iterator& operator--()    { --this->inner; return *this; }
+        Iterator  operator--(int) { auto tmp = *this; --this->inner; return tmp; }
+
+        Iterator::difference_type operator-(const Iterator &other) { return this->inner - other.inner; }
+        Iterator operator+(Iterator::difference_type shift) { Iterator tmp = *this; tmp.inner += shift; return tmp;}
+
+        friend bool operator== (const Iterator& a, const Iterator& b) { return a.inner == b.inner; };
+        friend bool operator!= (const Iterator& a, const Iterator& b) { return a.inner != b.inner; };
+    private:
+        storage_type::const_iterator inner;
+    };
+
+    Iterator begin() const { return Iterator(this->keywords.begin()); }
+    Iterator end() const { return Iterator(this->keywords.end()); }
+
+    const DeckKeyword& operator[](std::size_t index) const;
+    DeckView operator[](const std::string& keyword) const;
+    std::vector<std::size_t> index(const std::string& keyword) const;
+    std::size_t count(const std::string& keyword) const;
+    const DeckKeyword& front() const;
+    const DeckKeyword& back() const;
+
+    DeckView() = default;
+    void add_keyword(const DeckKeyword& kw);
+    bool has_keyword(const std::string& kw) const;
+    bool empty() const;
+    std::size_t size() const;
+
+    template<class Keyword>
+    bool has_keyword() const {
+        return this->has_keyword( Keyword::keywordName );
+    }
+
+    template<class Keyword>
+    DeckView get() const {
+        return this->operator[](Keyword::keywordName);
+    }
+
+private:
+    storage_type keywords;
+    std::unordered_map<std::string, std::vector<std::size_t>> keyword_index;
+};
+
+}
+#endif

opm/input/eclipse/Deck/FileDeck.hpp

@@ -23,15 +23,15 @@
 #include <optional>
 #include <string>
 #include <unordered_set>
+#include <filesystem>
 #include <fstream>
-#include <iostream>
+#include <iosfwd>
 #include <fmt/format.h>
 
-#include <opm/parser/eclipse/Deck/DeckKeyword.hpp>
-#include <opm/parser/eclipse/Deck/FileDeck.hpp>
-#include <opm/common/utility/FileSystem.hpp>
+#include <opm/input/eclipse/Deck/DeckKeyword.hpp>
+#include <opm/input/eclipse/Deck/FileDeck.hpp>
 
-namespace fs = Opm::filesystem;
+namespace fs = std::filesystem;
 
 namespace Opm {
 class Deck;
@@ -39,7 +39,7 @@ class Deck;
 class FileDeck {
 public:
     static const std::unordered_set<std::string> rst_keep_in_solution;
-
+    static const std::unordered_set<std::string> rst_keep_in_schedule;
 
 enum class OutputMode {
     INLINE = 1,
@@ -66,7 +66,7 @@ struct Index {
     bool   operator==(const Index& other) const;
     bool   operator!=(const Index& other) const;
     bool   operator<(const Index& other) const;
-
+    Index  operator+(std::size_t shift) const;
 
 private:
     const FileDeck * deck;
@@ -79,7 +79,7 @@ public:
     explicit Block(const std::string& filename);
     std::size_t size() const;
     void load(const Deck& deck, std::size_t deck_index);
-    std::optional<std::size_t> find(const std::string& keyword) const;
+    std::optional<std::size_t> find(const std::string& keyword, std::size_t keyword_index) const;
     bool empty() const;
     void erase(const FileDeck::Index& index);
     void insert(std::size_t keyword_index, const DeckKeyword& keyword);
@@ -94,7 +94,9 @@ friend FileDeck;
 
 
     explicit FileDeck(const Deck& deck);
+    std::optional<Index> find(const std::string& keyword, const Index& offset) const;
     std::optional<Index> find(const std::string& keyword) const;
+    std::size_t count(const std::string& keyword) const;
     void erase(const Index& index);
     void erase(const Index& begin, const Index& end);
     void insert(const Index& index, const DeckKeyword& keyword);
@@ -107,6 +109,7 @@ friend FileDeck;
 
     void rst_solution(const std::string& rst_base, int report_step);
     void insert_skiprest();
+    void skip(int report_step);
 
 private:
     std::vector<Block> blocks;

opm/input/eclipse/Deck/ImportContainer.hpp

@@ -24,7 +24,7 @@
 #include <string>
 #include <vector>
 
-#include <opm/parser/eclipse/Deck/DeckKeyword.hpp>
+#include <opm/input/eclipse/Deck/DeckKeyword.hpp>
 
 
 namespace Opm {

opm/input/eclipse/Deck/UDAValue.hpp

@@ -25,7 +25,7 @@
 #include <string>
 #include <iosfwd>
 
-#include <opm/parser/eclipse/Units/Dimension.hpp>
+#include <opm/input/eclipse/Units/Dimension.hpp>
 
 namespace Opm {
 
@@ -51,7 +51,7 @@ public:
     void update(const std::string& s);
     void update_value(const UDAValue& other);
 
-    static UDAValue serializeObject();
+    static UDAValue serializationTestObject();
 
     /*
       The get<double>() and get<std::string>() methods will throw an
@@ -80,7 +80,7 @@ public:
     bool operator==(const UDAValue& other) const;
     bool operator!=(const UDAValue& other) const;
 
-    bool is_numeric() { return numeric_value; }
+    bool is_numeric() const { return numeric_value; }
 
     template<class Serializer>
     void serializeOp(Serializer& serializer)
@@ -88,9 +88,12 @@ public:
         serializer(numeric_value);
         serializer(double_value);
         serializer(string_value);
-        dim.serializeOp(serializer);
+        serializer(dim);
     }
 
+    void operator*=(double rhs);
+
+
 private:
     bool numeric_value;
     double double_value;

opm/input/eclipse/EclipseState/Aquifer/Aquancon.hpp

@@ -26,7 +26,7 @@
   implement the analytical aquifer models in OPM Flow.
 */
 
-#include <opm/parser/eclipse/EclipseState/Grid/FaceDir.hpp>
+#include <opm/input/eclipse/EclipseState/Grid/FaceDir.hpp>
 
 #include <cstddef>
 #include <unordered_map>
@@ -93,18 +93,19 @@ namespace Opm {
             void pruneDeactivatedAquiferConnections(const std::vector<std::size_t>& deactivated_cells);
             void loadFromRestart(const RestartIO::RstAquifer& rst_aquifers);
 
-            static Aquancon serializeObject();
+            static Aquancon serializationTestObject();
 
             const std::unordered_map<int, std::vector<Aquancon::AquancCell>>& data() const;
             bool operator==(const Aquancon& other) const;
             bool active() const;
 
-            const std::vector<Aquancon::AquancCell>& operator[](int aquiferID) const;
+            bool hasAquiferConnections(int aquiferID) const;
+            const std::vector<Aquancon::AquancCell>& getConnections(int aquiferID) const;
 
             template<class Serializer>
             void serializeOp(Serializer& serializer)
             {
-                serializer.map(this->cells);
+                serializer(this->cells);
             }
 
         private:

opm/input/eclipse/EclipseState/Aquifer/AquiferCT.hpp

@@ -81,7 +81,7 @@ namespace Opm {
             std::vector<double> dimensionless_time{};
             std::vector<double> dimensionless_pressure{};
 
-            static AQUCT_data serializeObject();
+            static AQUCT_data serializationTestObject();
 
             double timeConstant() const { return this->time_constant_; }
             double influxConstant() const { return this->influx_constant_; }
@@ -129,7 +129,7 @@ namespace Opm {
         void loadFromRestart(const RestartIO::RstAquifer& rst,
                              const TableManager&          tables);
 
-        static AquiferCT serializeObject();
+        static AquiferCT serializationTestObject();
 
         std::size_t size() const;
         std::vector<AquiferCT::AQUCT_data>::const_iterator begin() const;
@@ -142,7 +142,7 @@ namespace Opm {
         template<class Serializer>
         void serializeOp(Serializer& serializer)
         {
-            serializer.vector(m_aquct);
+            serializer(m_aquct);
         }
 
     private:

opm/input/eclipse/EclipseState/Aquifer/AquiferConfig.hpp

@@ -20,10 +20,10 @@
 #ifndef OPM_AUQIFER_CONFIG_HPP
 #define OPM_AUQIFER_CONFIG_HPP
 
-#include <opm/parser/eclipse/EclipseState/Aquifer/Aquancon.hpp>
-#include <opm/parser/eclipse/EclipseState/Aquifer/Aquifetp.hpp>
-#include <opm/parser/eclipse/EclipseState/Aquifer/AquiferCT.hpp>
-#include <opm/parser/eclipse/EclipseState/Aquifer/NumericalAquifer/NumericalAquifers.hpp>
+#include <opm/input/eclipse/EclipseState/Aquifer/Aquancon.hpp>
+#include <opm/input/eclipse/EclipseState/Aquifer/Aquifetp.hpp>
+#include <opm/input/eclipse/EclipseState/Aquifer/AquiferCT.hpp>
+#include <opm/input/eclipse/EclipseState/Aquifer/NumericalAquifer/NumericalAquifers.hpp>
 
 #include <cstddef>
 #include <vector>
@@ -53,7 +53,7 @@ public:
     void loadFromRestart(const RestartIO::RstAquifer& aquifers,
                          const TableManager&          tables);
 
-    static AquiferConfig serializeObject();
+    static AquiferConfig serializationTestObject();
 
     bool active() const;
     const AquiferCT& ct() const;
@@ -61,6 +61,7 @@ public:
     const Aquancon& connections() const;
     bool operator==(const AquiferConfig& other) const;
     bool hasAquifer(const int aquID) const;
+    bool hasAnalyticalAquifer(const int aquID) const;
 
     bool hasNumericalAquifer() const;
     bool hasAnalyticalAquifer() const;
@@ -70,10 +71,10 @@ public:
     template<class Serializer>
     void serializeOp(Serializer& serializer)
     {
-        aquifetp.serializeOp(serializer);
-        aquiferct.serializeOp(serializer);
-        aqconn.serializeOp(serializer);
-        numerical_aquifers.serializeOp(serializer);
+        serializer(aquifetp);
+        serializer(aquiferct);
+        serializer(aqconn);
+        serializer(numerical_aquifers);
     }
 
 private:

opm/input/eclipse/EclipseState/Aquifer/Aquifetp.hpp

@@ -57,7 +57,8 @@ class Aquifetp {
                      const double C_t_,
                      const double V0_,
                      const double d0_,
-                     const double p0_);
+                     const double p0_,
+                     const double t0_);
 
         int aquiferID{};
         int pvttableID{};
@@ -68,8 +69,9 @@ class Aquifetp {
         double datum_depth{};
 
         std::optional<double> initial_pressure{};
+        std::optional<double> initial_temperature{};
 
-        static AQUFETP_data serializeObject();
+        static AQUFETP_data serializationTestObject();
 
         double timeConstant() const { return this->time_constant_; }
         double waterDensity() const { return this->water_density_; }
@@ -89,6 +91,7 @@ class Aquifetp {
             serializer(this->initial_watvolume);
             serializer(this->datum_depth);
             serializer(this->initial_pressure);
+            serializer(this->initial_temperature);
             serializer(this->time_constant_);
             serializer(this->water_density_);
             serializer(this->water_viscosity_);
@@ -107,7 +110,7 @@ class Aquifetp {
     void loadFromRestart(const RestartIO::RstAquifer& rst,
                          const TableManager&          tables);
 
-    static Aquifetp serializeObject();
+    static Aquifetp serializationTestObject();
 
     const std::vector<Aquifetp::AQUFETP_data>& data() const;
 
@@ -121,7 +124,7 @@ class Aquifetp {
     template<class Serializer>
     void serializeOp(Serializer& serializer)
     {
-        serializer.vector(m_aqufetp);
+        serializer(m_aqufetp);
     }
 
 private:

opm/input/eclipse/EclipseState/Aquifer/NumericalAquifer/NumericalAquiferConnection.hpp

@@ -20,7 +20,7 @@
 #ifndef OPM_NUMERICALAQUIFERCONNECTION_HPP
 #define OPM_NUMERICALAQUIFERCONNECTION_HPP
 
-#include <opm/parser/eclipse/EclipseState/Grid/FaceDir.hpp>
+#include <opm/input/eclipse/EclipseState/Grid/FaceDir.hpp>
 #include <map>
 #include <array>
 #include <vector>

opm/input/eclipse/EclipseState/Aquifer/NumericalAquifer/NumericalAquifers.hpp

@@ -25,7 +25,7 @@
 
 #include <stddef.h>
 
-#include <opm/parser/eclipse/EclipseState/Aquifer/NumericalAquifer/SingleNumericalAquifer.hpp>
+#include <opm/input/eclipse/EclipseState/Aquifer/NumericalAquifer/SingleNumericalAquifer.hpp>
 
 namespace Opm {
     class Deck;
@@ -57,11 +57,11 @@ namespace Opm {
         void initConnections(const Deck& deck, const EclipseGrid& grid);
         void postProcessConnections(const EclipseGrid& grid, const std::vector<int>& actnum);
 
-        static NumericalAquifers serializeObject();
+        static NumericalAquifers serializationTestObject();
         template <class Serializer>
         void serializeOp(Serializer& serializer)
         {
-            serializer.map(this->m_aquifers);
+            serializer(this->m_aquifers);
             serializer(this->m_num_records);
         }