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README.md |
Open Porous Media Core Library
THIS MODULE IS DEPRECATED. The code is now integrated in the other modules.
These are release notes for opm-core.
CONTENT
opm-core is the core library within OPM and contains the following
- Fluid properties (basic PVT models and rock properties)
- Grid handling (cornerpoint grids, unstructured grid interface)
- Linear Algebra (interface to different linear solvers)
- Pressure solvers (various discretization schemes, flow models)
- Simulators (some basic examples of simulators based on sequential splitting schemes)
- Transport solvers (various discretization schemes, flow models)
- Flow diagnostics (time-of-flight and tracer solvers, diagnostic functions)
- Utilities (input and output processing, unit conversion)
- Wells (basic well handling)
LICENSE
The library is distributed under the GNU General Public License, version 3 or later (GPLv3+).
PLATFORMS
The opm-core module is designed to run on Linux platforms. It is also regularly run on Mac OS X. No efforts have been made to ensure that the code will compile and run on windows platforms.
DEPENDENCIES FOR DEBIAN BASED DISTRIBUTIONS (Debian Squeeze/Ubuntu Precise)
packages necessary for building
sudo apt-get install -y build-essential gfortran cmake cmake-data util-linux
packages necessary for documentation
sudo apt-get install -y doxygen ghostscript texlive-latex-recommended pgf
packages necessary for version control
sudo apt-get install -y git-core
basic libraries necessary for both DUNE and OPM
sudo apt-get install -y libboost-all-dev libsuperlu3-dev libsuitesparse-dev
for server edition of Ubuntu add-apt-repository depends on
sudo apt-get install python-software-properties
add this repository for necessary backports (required for Ubuntu Precise)
sudo add-apt-repository -y ppa:opm/ppa sudo apt-get update
parts of DUNE needed
sudo apt-get install libdune-common-dev libdune-istl-dev libdune-grid-dev
libraries necessary for OPM
sudo apt-get install -y libtinyxml-dev
Ensemble based Reservoir Tool Eclipse utilities module
IMPORTANT: if you install this (binary) version of ERT,
you will get the 2015.04 release version. That
is only compatible with the 2015.04 release version
of OPM! If you are building OPM from source you should
use the latest master branches of both ERT and OPM.
sudo apt-get install ert.ecl
Note: You should compile the OPM modules using the same toolchain that was used to build DUNE. Otherwise, you can get strange ABI errors.
DEPENDENCIES FOR SUSE BASED DISTRIBUTIONS
repository containing prerequisites
sudo zypper ar http://download.opensuse.org/repositories/science/openSUSE_12.3/science.repo
math libraries
sudo zypper in blas-devel lapack-devel suitesparse-devel superlu-devel
utility libraries
sudo zypper in boost-devel tinyxml-devel
tools necessary for building
sudo zypper in gcc gcc-c++ gcc-fortran cmake git doxygen
DUNE libraries
sudo zypper in dune-common-devel dune-istl-devel
Ensemble-based Reservoir Tools Eclipse utility module
git sudo zypper ar http://www.opm-project.org/packages/current/opensuse/12/opm.repo sudo zypper in zlib-devel ert.ecl-devel
(to remove the repository, run sudo zypper removerepo "Open Porous Media Initiative"
)
DEPENDENCIES FOR RHEL BASED DISTRIBUTIONS
packages necessary for building
sudo yum install make gcc-c++ gcc-gfortran cmake28 util-linux
packages necessary for documentation
sudo yum install doxygen ghostscript texlive
packages necessary for version control
sudo yum install git
basic libraries necessary for both DUNE and OPM
sudo yum install boost-devel suitesparse-devel blas-devel lapack-devel
libraries necessary for OPM
sudo yum install tinyxml-devel
sudo yum-config-manager --add-repo
http://www.opm-project.org/packages/current/redhat/6/opm.repo
sudo yum install libsuperlu3 ert.ecl-devel
optional
sudo yum install dune-istl-devel
DEPENDENCIES FOR MACOS X
You can build opm-core with Apple Xcode 4.6 or later, Ruby 1.9 or later and the Homebrew port system:
activate necessary repositories
brew tap homebrew/science brew tap opm/opm
libraries necessary for OPM
caffeinate brew install suite-sparse superlu ert.ecl caffeinate brew install --with-c++11 boost tinyxml dune-istl
DOWNLOADING
For a read-only download: git clone git://github.com/OPM/opm-core.git
If you want to contribute, fork OPM/opm-core on github.
BUILDING
There are two ways to build the opm-core library.
- As a stand-alone library. In this setup we recommend creating an entirely separate directory outside the directory containing the source code and doing the build from that separate directory (termed "the build directory"). This configuration is sometimes referred to as an "out-of-source build".
As an example, consider the following layout in which "opm-core" refers to the directory containing the package source code as downloaded from GitHub
workspace
|
+-- build
|
+-- opm-core
| |
| +-- ...
| |
| +-- opm
| |
| +-- ...
We will configure a release-type (optimised) build using traditional Unix Makefiles within the "build" directory. The following command configures the build
cd path/to/build
cmake ../opm-core -DCMAKE_BUILD_TYPE=Release
If you want to debug the library you should specify the build type "Debug" instead of "Release" in the command above. This will disable optimizations and make it easier to step through the code.
Building the software then amounts to typing
make
in the top-level "build" directory; i.e., the directory from which we invoked the "cmake" utility. On a multi-core computer system you may want to build the software in parallel (make(1)'s "job-server" mode) in order to reduce the total amount of time needed to complete the build. To do so, replace the above "make" command with
make -j N
or, possibly,
nice -20 make -j N
in which "N" is an integer that should typically not exceed the number of cores in the system.
Once the library has been built, it can be installed in a central, system-wide location (often in "/usr/local") through the command
sudo make install
- As a dune module.
- Put the opm-core directory in the same directory as the other dune modules to be built (e.g. dune-commmon, dune-grid). Note that for Ubuntu you can install Dune from the ppa as outlined above.
- Run dunecontrol as normal. For more information on the dune build system, see http://www.dune-project.org/doc/installation-notes.html
DOCUMENTATION
Efforts have been made to document the code with Doxygen. In order to build the documentation, enter the command
make doc
in the topmost directory.
REPORTING ISSUES
Issues can be reported in the Git issue tracker online at:
http://github.com/OPM/opm-core/issues
To help diagnose build errors, please provide a link to a build log together with the issue description.
You can capture such a log from the build using the `script' utility, e.g.:
LOGFILE=$(date +%Y%m%d-%H%M-)build.log ;
cmake -E cmake_echo_color --cyan --bold "Log file: $LOGFILE" ;
script -q $LOGFILE -c 'cmake ../opm-core -DCMAKE_BUILD_TYPE=Debug' &&
script -q $LOGFILE -a -c 'ionice nice make -j 4 -l 3' ||
cat CMakeCache.txt CMakeFiles/CMake*.log >> $LOGFILE
The resulting file can be uploaded to for instance gist.github.com.