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245 Commits

Author SHA1 Message Date
Klaus Mosthaf
c885041050 made some corrections to quickstart-guide, guidelines and install TEX-files 2012-07-12 21:23:08 +02:00
Klaus Mosthaf
e3744d9b1d some corrections in the installation part of the handbook - tbc 2012-07-12 21:23:06 +02:00
Andreas Lauser
200675efd3 tutorial: adapt line numbers so that no fragments boilerplate text appears 
the GPL copyright headers and the doxygen file descriptions are not really
relevant for the tutorials...
 2012-07-12 21:23:06 +02:00
Benjamin Faigle
36806bbc38 added more information to tutorial to ease it for newcomers 2012-07-12 21:23:06 +02:00
David Werner
46117984ca wrong module name 2012-07-12 21:23:06 +02:00
David Werner
ebe73e722e section about application of patches 2012-07-12 21:23:06 +02:00
David Werner
0538826c81 checkout-dumux script 2012-07-12 21:23:04 +02:00
David Werner
61e6113f96 aboveskip option formatting of bash-scripts, more corrected text in install.tex 2012-07-12 21:23:03 +02:00
Melanie Darcis
759f43d877 Typo corrected in tutorials. Reference to tutorial/results in coupled tutorial deleted. 2012-07-12 21:23:03 +02:00
Andreas Lauser
0bf5bdb381 build system: fine-tune the option files and the macros in dumux.m4 
we disable MPI by default as it might result in compilation issues
with newer compilers and the models do not work reliably anyway. also
the conditionals for building the handbook are refined and
summary status messages are added for LaTeX and the handbook.
 2012-07-12 21:23:03 +02:00
David Werner
d54656d075 some more changes 2012-07-12 21:23:03 +02:00
David Werner
0b7a65f8e2 todays work on install file 2012-07-12 21:23:03 +02:00
David Werner
19d75b11c3 tuning of listings style for bash code listings in install.tex 2012-07-12 21:23:03 +02:00
David Werner
29b9ac3251 error in wiki entries 2012-07-12 21:23:03 +02:00
David Werner
d1f8ad24b8 some more changes to installation chapter 2012-07-12 21:23:03 +02:00
David Werner
e24a0da433 bash commands typeset with package listings with a style definition. 2012-07-12 21:23:03 +02:00
David Werner
f7b1f0a25d some more changes for better reading 2012-07-12 21:23:02 +02:00
David Werner
1a6a62d97d Try to explain some things more explicit, worked on structuring though this chapter. Todo shell-commands not within itemize refs more precise. 2012-07-12 21:23:02 +02:00
Philipp Nuske
f07417a5c1 clarified that there is no pdelab tarball 2012-07-12 21:23:02 +02:00
Philipp Nuske
13deae5805 minor changes to install procedure in the handbook 2012-07-12 21:23:01 +02:00
Philipp Nuske
deb5f75bb9 dumux cannnot be build without any options, at least fno-strict-aliasing needs to be handed over. 2012-07-12 21:23:01 +02:00
Andreas Lauser
ed57a85fcf handbook: regenerated model descriptions from the doxygen sources 2012-07-12 21:23:01 +02:00
Philipp Nuske
d4570ed214 boost and autotools belong to the prerequisits not to the additional packages 2012-07-12 21:23:00 +02:00
Philipp Nuske
815ae962dc quenched some typos in the installation guidelines, added needed packages for ubuntu 2012-07-12 21:23:00 +02:00
Benjamin Faigle
be88724d4a no compilation of handbook when --disable-documentation 2012-07-12 21:22:59 +02:00
Katherina Baber
ae7552e59d small changes in box-scheme picture and corresponding svg 2012-07-12 21:22:59 +02:00
Philipp Nuske
3357e88a79 streamlined the formatting of \Dune , \Dune-Root, changed some requesites related stuff 2012-07-12 21:22:58 +02:00
Philipp Nuske
283b4e2115 cleaned Makefile of handbook setdependencies of handbook strait 2012-07-12 21:22:58 +02:00
Benjamin Faigle
0d7f8adc41 adapted tutorial decoupled to unique neumann-BC definition 2012-07-12 21:22:58 +02:00
Benjamin Faigle
f4208fd27b edited decoupled exercices for new material law parameters 2012-07-12 21:22:56 +02:00
Andreas Lauser
66f7ee2564 doc/flowchart: remove the gravest errors 
IMHO it still has some issues with consistency and the level of detail
in some places...
 2012-07-12 21:22:56 +02:00
Karin Erbertseder
af17c21b48 (empty message) 2012-07-12 21:22:56 +02:00
Karin Erbertseder
2ddf3cf14c add a new picture 2012-07-12 21:22:56 +02:00
Karin Erbertseder
6379d8e7f1 added chapter box method 2012-07-12 21:22:56 +02:00
Benjamin Faigle
a89b447312 adapted handbook to bernds changes of tutorial (make it less diffusive) 2012-07-12 21:22:56 +02:00
Philipp Nuske
a666aa9e85 quenched typos, enhanced readability in few places AND updated the "Mother of all Flowcharts" (here to stay) 2012-07-12 21:22:55 +02:00
Melanie Darcis
230042640c extraction rate and simulation times adapted to new problem file 2012-07-12 21:22:54 +02:00
Katherina Baber
36a3ddd149 (empty message) 2012-07-12 21:22:53 +02:00
Benjamin Faigle
9c0c9b9fb0 updated tutorial decoupled, reformulated things and update minor mistakes 2012-07-12 21:22:53 +02:00
Bernd Flemisch
4f0df32508 cleaned up documentation 2012-07-12 21:22:50 +02:00
Melanie Darcis
18ab91054a (empty message) 2012-07-12 21:22:50 +02:00
Melanie Darcis
f3a53e5115 small correction 2012-07-12 21:22:50 +02:00
Melanie Darcis
507c4862b2 new version of tutorial coupled 2012-07-12 21:22:50 +02:00
Andreas Lauser
2849154a60 handbook: factor the design patterns chapter out into a separate file 2012-07-12 21:22:49 +02:00
Andreas Lauser
ecc16cfd72 handbook: make the undefined references go away, finalize on the design patterns and property system chapters 2012-07-12 21:22:49 +02:00
Andreas Lauser
96e5522ad5 introduce new file dumux/common/basicproperties.hh; remove ReferenceElements property from decoupled models; doc 
- now every model type tag should be derived from the NumericModel type
tag.
- instead of retrieving the reference elements from the ReferenceElements property,
  use Dune::GenericReferenceElements<Scalar, dim>
- some improvements for the handbook's design patterns and property system chapeters
 2012-07-12 21:22:48 +02:00
Andreas Lauser
02ddfea028 doc: (almost) finish the design patterns chapter in the handbook 
also remove the ReferenceElements property because changing to the old
DUNE entity numbering would not work anyways...
 2012-07-12 21:22:48 +02:00
Klaus Mosthaf
99e13c14fe made small corrections with the tutorial figures 2012-07-12 21:22:47 +02:00
Andreas Lauser
5fdd83c9be time manager: do not call problem.nextTimeStepSize() at the begining of a new episode 
handbook: some improvements
 2012-07-12 21:22:47 +02:00
Andreas Lauser
a5d28c06f2 logo: do not clip the shadow anymore 
this looks nicer (I hope)
 2012-07-12 21:22:47 +02:00
Andreas Lauser
3d737c2952 handbook: Add automatically extracted model desctiptions for the fully coupled models 
also improve the description of the richards model so that it is ready
for the handbook
 2012-07-12 21:22:46 +02:00
Klaus Mosthaf
e14fa005d3 added some links to the external libraries / modules, needs to be extended 2012-07-12 21:22:45 +02:00
Klaus Mosthaf
98c08883aa some corrections in the installation chapter of the handbook 2012-07-12 21:22:45 +02:00
Klaus Mosthaf
47724af9dc Further work on the installation chapter of the handbook 2012-07-12 21:22:45 +02:00
David Werner
2f9338825f More dependencies mentioned, old parts of Philipp removed. 2012-07-12 21:22:44 +02:00
David Werner
4799cd9410 some minor improvements 2012-07-12 21:22:44 +02:00
David Werner
66ff5a0c87 added hint for external libraries IWS users, Todo: give more precise references where things are documented in Dune and external libaries are found, proof read and english-spell check 2012-07-12 21:22:44 +02:00
David Werner
9ca29df445 typing error in one latex command made it not to build .. fixed 2012-07-12 21:22:44 +02:00
David Werner
e8b64981ae intermediate state, description to iws internal external dune libraries commented out 2012-07-12 21:22:44 +02:00
Klaus Mosthaf
ea2e30538f removed line break 2012-07-12 21:22:44 +02:00
Katherina Baber
dc962a81e8 (empty message) 2012-07-12 21:22:44 +02:00
Klaus Mosthaf
0e0168603a removed line break 2012-07-12 21:22:43 +02:00
Klaus Mosthaf
0cfbf91760 further work on the tutorial_coupled 2012-07-12 21:22:42 +02:00
Philipp Nuske
703a898965 added the information how to get pardiso running on a non-LH2 machine 2012-07-12 21:22:42 +02:00
Klaus Mosthaf
38159bf1f1 further work on the tutorial_coupled exchanged fluidsystem and fluid to twophase water-oil 2012-07-12 21:22:42 +02:00
Nicolas Schwenck
1a2c09a476 extended information about Dune-debug output stream. 2012-07-12 21:22:42 +02:00
Melanie Darcis
0e19686ffe small corrections 2012-07-12 21:22:41 +02:00
Melanie Darcis
c9df44b986 small corrections 2012-07-12 21:22:41 +02:00
Klaus Mosthaf
b442580b0c small changes in the installation chapter 2012-07-12 21:22:41 +02:00
Klaus Mosthaf
8f71a34f8f further work on the installation and getting-started chapter of the handbook 2012-07-12 21:22:41 +02:00
David Werner
248f683787 developers part is not anonymously accessable 2012-07-12 21:22:41 +02:00
Klaus Mosthaf
a6959aa5dd started to change the getting started chapter of the handbook 2012-07-12 21:22:41 +02:00
Benjamin Faigle
15db5c3bc6 changed grid-howto to stable release 2.0 to avoid installation errors 2012-07-12 21:22:40 +02:00
Benjamin Faigle
414bff3fa9 new version of decoupled tutorial 2012-07-12 21:22:39 +02:00
Benjamin Faigle
e49d8dd6ec edited handbook docu for tutorial-decoupled 2012-07-12 21:22:38 +02:00
Philipp Nuske
f3323041af new package included 2012-07-12 21:22:38 +02:00
Philipp Nuske
3fb1182348 as agreed today in the Dumux Coffee, I put some BIG note into the handbook that needs to be replaced by information about the external folder (install.tex) 2012-07-12 21:22:38 +02:00
Katherina Baber
1be6abf6b8 (empty message) 2012-07-12 21:22:38 +02:00
Philipp Nuske
3f50edcfa7 Work on handbook - quenched typos - added and started to fill new section tips & tricks 2012-07-12 21:22:38 +02:00
Katherina Baber
0eac6e0374 update of chapter 5 (structure) in handbook 2012-07-12 21:22:38 +02:00
Philipp Nuske
3c01670acf - corrected typos in NewtonInAnutshell.tex 2012-07-12 21:22:37 +02:00
Andreas Lauser
a0a5b85242 handbook: Some work on the intro, start of chapter about the property system 2012-07-12 21:22:37 +02:00
Benjamin Faigle
f3a2d10ca1 adapt handbook to split version of dumux 2012-07-12 21:22:27 +02:00
Andreas Lauser
73d9972d52 sync with splitting point 2012-07-12 21:21:06 +02:00
Benjamin Faigle
4324b50f0f got the bright idea to do a spellcheck.... 2012-07-11 23:28:30 +02:00
Benjamin Faigle
2b08c5f50a updated handbook to capture the new_material system of the tutorial_coupled. 2012-07-11 23:28:30 +02:00
Philipp Nuske
6f81b60544 newFolder.tex hinzu gefuegt 2012-07-11 23:28:02 +02:00
Philipp Nuske
68069840c7 funktionesaufrufe in der Flow-Doku hoch gerückt 2012-07-11 23:28:02 +02:00
Philipp Nuske
d1c43d4f85 two new chapters in the handbook showing how the problem is moved around in Dumux and one for the Newton 2012-07-11 23:28:02 +02:00
Philipp Nuske
fa1175061d Newly introducing newFolder.tex, which describes how to setup a new Folder (and which files to adapt) in \Dumux 2012-07-11 23:27:59 +02:00
Andreas Lauser
351c18602a merge the changes directly done in the stable branch back into trunk 2012-07-11 23:27:59 +02:00
Markus Wolff
330f89d037 tutorial decoupled fixed for releas 2012-07-11 23:27:55 +02:00
Markus Wolff
c7e0293de1 some corrections in the handbook: tutorial-decoupled 2012-07-11 23:27:55 +02:00
Bernd Flemisch
66bc40d769 handbook finished 2012-07-11 23:27:54 +02:00
Bernd Flemisch
2a1452fed2 chapter structure of handbook filled a bit 2012-07-11 23:27:54 +02:00
Melanie Darcis
72c6a73ad1 spelling error 2012-07-11 23:27:54 +02:00
Markus Wolff
2424327588 added handbook part for decoupled 2p 2012-07-11 23:27:54 +02:00
Bernd Flemisch
e3454d9e0f set naming conventions in tutorial_decoupled.cc and tutorialsoil_coupled.hh 2012-07-11 23:27:54 +02:00
Bernd Flemisch
045e8afbe7 logo included in handbook 2012-07-11 23:27:52 +02:00
Andreas Lauser
3489275642 adapt coupled tutorial 2012-07-11 23:27:51 +02:00
Andreas Lauser
cdc88582c3 adapt the tutorial for the fully coupled models to the new ways to do things 2012-07-11 23:27:51 +02:00
Andreas Lauser
8de246205d don't build the documentation if the --disable-documentation configure flag is used 2012-07-11 23:27:51 +02:00
Andreas Lauser
0ac1b0f4ed fix documentation 2012-07-11 23:27:51 +02:00
Andreas Lauser
5a6a61462f fix the handbook 2012-07-11 23:27:49 +02:00
Andreas Lauser
a2f89656f9 fix formula syntax for the coupled models 2012-07-11 23:27:49 +02:00
Andreas Lauser
f0c2b59779 rename the phaseproperties into fluids, refactor phaseproperties.hh, so that every fluid has a file of its own. 2012-07-11 23:27:48 +02:00
Markus Wolff
7f38afb3d1 tutorial-decoupled in handbook on new version 2012-07-11 23:27:48 +02:00
Andreas Lauser
bb5d0f36e9 improve documentation of the two-phase model, make the boundary conditions of the lens problem readable 2012-07-11 23:27:45 +02:00
Jochen Fritz
ec1df1978d 2012-07-11 23:27:45 +02:00
Bernd Flemisch
883ee7b43c dunedesign.eps added 2012-07-11 23:27:38 +02:00
Bernd Flemisch
0dba3bd6b7 handbook updated 2012-07-11 23:27:38 +02:00
Bernd Flemisch
04ec7c0032 decoupled section splitted in handbook 2012-07-11 23:27:38 +02:00
Andreas Lauser
29ca3fdd81 change the script for extracting the detailed description from the doxygen generated latex files so that it works even if there is no detailed description 2012-07-11 23:27:38 +02:00
Bernd Flemisch
06e0654d5d model description added to handbook 2012-07-11 23:27:37 +02:00
Klaus Mosthaf
2968790d66 Replaced name of the install script and revised the installation notes 2012-07-11 23:26:20 +02:00
Markus Wolff
75d558c4b4 2012-07-09 22:44:26 +02:00
Klaus Mosthaf
76c6ccd2c3 added paragraph about anonymous installation from outside 2012-07-09 22:44:26 +02:00
Markus Wolff
8347ef2641 tutorial exerciesed finished 2012-07-09 22:44:26 +02:00
Melanie Darcis
3f3a06f562 2012-07-09 22:44:26 +02:00
Melanie Darcis
f17f6fc7d2 exercise 2 corrected, exercise 3 added. 2012-07-09 22:44:26 +02:00
Melanie Darcis
1696d66096 exercise coupled revised 2012-07-09 22:44:26 +02:00
Melanie Darcis
3bcb26e4f7 exercises of the coupled tutorial problem included. Need to be completed and checked. I will also create some result files and store them in /dune-mux/test/tutorial I will do that the week after next week 2012-07-09 22:44:25 +02:00
Melanie Darcis
4f8d127eff eps figures for tutorial exercises 2012-07-09 22:44:25 +02:00
Melanie Darcis
0511f94228 figures for tutorial in xfig format 2012-07-09 22:44:25 +02:00
Bernd Flemisch
f186ff6dbd Makefile.am and configure.ac changed to be able to make tarballs 2012-07-09 22:44:25 +02:00
Andreas Lauser
68090c87d2 fixed the 2p2c co2 model and test 2012-07-09 22:44:24 +02:00
Klaus Mosthaf
61b46be462 Corrected two small errors in the install.tex 2012-07-09 22:44:24 +02:00
Markus Wolff
a017e20e1a some format errors corrected 2012-07-09 22:44:23 +02:00
Markus Wolff
fb0cddd129 there were still some labels missing! 2012-07-09 22:44:23 +02:00
Markus Wolff
618bb72ea4 Some corrections on the existing parts of the handbook: Labels 2012-07-09 22:44:23 +02:00
Melanie Darcis
afa1db0c9d tutorial-coupled revised 2012-07-09 22:44:23 +02:00
Melanie Darcis
e75a935524 coupled tutorial revised 2012-07-09 22:44:23 +02:00
Klaus Mosthaf
52ff34863c modified quickstart-guide (handbook) 2012-07-09 22:44:23 +02:00
Markus Wolff
64dac3a7be input intro.tex commented out - error during dune-control 2012-07-09 22:44:23 +02:00
Bernd Flemisch
e1ea7bc027 handbook updated 2012-07-09 22:44:23 +02:00
Melanie Darcis
7cabd8a2a8 first version, thanks to Markus' preliminary work 2012-07-09 22:44:22 +02:00
Melanie Darcis
ddf3db5b41 2012-07-09 22:44:22 +02:00
Markus Wolff
048bd90c4e picture corrected: Dumux tutorial decoupled 2012-07-09 22:44:22 +02:00
Markus Wolff
543795e79f correction of the dumux tutorial (handbook) 2012-07-09 22:44:22 +02:00
Markus Wolff
0eeaab3a61 First iteration of the tutorial for the decoupled model 2012-07-09 22:44:22 +02:00
Markus Wolff
e41b0ef6a2 documentation of tutorial_decoupled.cc 2012-07-09 22:44:20 +02:00
Markus Wolff
43b34413d3 tutorial, first iteration 2012-07-09 22:44:18 +02:00
Klaus Mosthaf
33d333179a Made some small changes to the quickstart-guide.tex of the handbook. This is rather to test the eclipse-extension 'subclipse'. 2012-07-09 22:44:18 +02:00
Klaus Mosthaf
41f45abf3e subdivided dumux-handbook.tex into several sub-texs, startet to work on the quickstart-guide 2012-07-09 22:44:16 +02:00
Bernd Flemisch
d43c51fce2 handbook updated 2012-07-09 22:44:16 +02:00