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147 lines
6.2 KiB
C++
147 lines
6.2 KiB
C++
// -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
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// vi: set et ts=4 sw=4 sts=4:
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/*
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Copyright 2022 SINTEF Digital, Mathematics and Cybernetics.
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Copyright 2023 Inria, Bretagne–Atlantique Research Center
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This file is part of the Open Porous Media project (OPM).
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OPM is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 2 of the License, or
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(at your option) any later version.
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OPM is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with OPM. If not, see <http://www.gnu.org/licenses/>.
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Consult the COPYING file in the top-level source directory of this
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module for the precise wording of the license and the list of
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copyright holders.
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*/
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#include <config.h>
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#include <ebos/damariswriter.hh>
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#include <opm/common/ErrorMacros.hpp>
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#include <opm/common/OpmLog/OpmLog.hpp>
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#include <Damaris.h>
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#include <fmt/format.h>
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#include <limits>
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#include <stdexcept>
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namespace Opm::DamarisOutput {
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int setPosition(const char* field, int rank, int64_t pos)
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{
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int dam_err = damaris_set_position(field, &pos);
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if (dam_err != DAMARIS_OK) {
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OpmLog::error(fmt::format("damariswriter::writeOutput() : ( rank:{})"
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"damaris_set_position({}, ...), Damaris Error: {} ",
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rank, field, damaris_error_string(dam_err)));
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}
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return dam_err;
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}
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int setParameter(const char* field, int rank, int value)
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{
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int dam_err = damaris_parameter_set(field, &value, sizeof(int));
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if (dam_err != DAMARIS_OK) {
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OpmLog::error(fmt::format("(rank:{}) Damaris library produced an error result for "
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"damaris_parameter_set(\"{}\",...)", rank, field));
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}
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return dam_err;
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}
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int write(const char* field, int rank, const void* data)
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{
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int dam_err = damaris_write(field, data);
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if (dam_err != DAMARIS_OK) {
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OpmLog::error(fmt::format("damariswriter::writeOutput() : ( rank:{}) "
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"damaris_write({}, ...), Damaris Error: {} ",
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rank, field, damaris_error_string(dam_err)));
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}
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return dam_err;
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}
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int endIteration(int rank)
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{
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int dam_err = damaris_end_iteration();
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if (dam_err != DAMARIS_OK) {
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OpmLog::error(fmt::format("damariswriter::writeOutput() : ( rank:{}) "
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"damaris_end_iteration(), Damaris Error: {} ",
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rank, damaris_error_string(dam_err)));
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}
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return dam_err;
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}
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int setupWritingPars(Parallel::Communication comm,
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const int n_elements_local_grid,
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std::vector<unsigned long long>& elements_rank_offsets)
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{
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// one for each rank -- to be gathered from each client rank
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std::vector<unsigned long long> elements_rank_sizes(comm.size());
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// n_elements_local_grid should be the full model size
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const unsigned long long n_elements_local = n_elements_local_grid;
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// This gets the n_elements_local from all ranks and copies them to a std::vector of all the values on all ranks
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// (elements_rank_sizes[]).
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comm.allgather(&n_elements_local, 1, elements_rank_sizes.data());
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elements_rank_offsets[0] = 0ULL;
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// This scan makes the offsets to the start of each ranks grid section if each local grid data was concatenated (in
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// rank order)
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std::partial_sum(elements_rank_sizes.begin(),
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std::prev(elements_rank_sizes.end()),
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elements_rank_offsets.begin() + 1);
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// find the global/total size
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unsigned long long n_elements_global_max = elements_rank_offsets[comm.size() - 1];
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n_elements_global_max += elements_rank_sizes[comm.size() - 1]; // add the last ranks size to the already accumulated offset values
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if (comm.rank() == 0) {
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OpmLog::debug(fmt::format("In setupDamarisWritingPars(): n_elements_global_max = {}",
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n_elements_global_max));
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}
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// Set the paramater so that the Damaris servers can allocate the correct amount of memory for the variabe
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// Damaris parameters only support int data types. This will limit models to be under size of 2^32-1 elements
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// ToDo: Do we need to check that local ranks are 0 based ?
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int dam_err = setParameter("n_elements_local", comm.rank(), elements_rank_sizes[comm.rank()]);
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// Damaris parameters only support int data types. This will limit models to be under size of 2^32-1 elements
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// ToDo: Do we need to check that n_elements_global_max will fit in a C int type (INT_MAX)
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if( n_elements_global_max <= std::numeric_limits<int>::max() ) {
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setParameter("n_elements_total", comm.rank(), n_elements_global_max);
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} else {
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OpmLog::error(fmt::format("( rank:{} ) The size of the global array ({}) is"
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"greater than what a Damaris paramater type supports ({}). ",
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comm.rank(), n_elements_global_max, std::numeric_limits<int>::max() ));
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// assert( n_elements_global_max <= std::numeric_limits<int>::max() ) ;
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OPM_THROW(std::runtime_error, "setupDamarisWritingPars() n_elements_global_max "
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"> std::numeric_limits<int>::max() " + std::to_string(dam_err));
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}
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// Use damaris_set_position to set the offset in the global size of the array.
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// This is used so that output functionality (e.g. HDF5Store) knows global offsets of the data of the ranks
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setPosition("PRESSURE", comm.rank(), elements_rank_offsets[comm.rank()]);
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dam_err = setPosition("GLOBAL_CELL_INDEX", comm.rank(), elements_rank_offsets[comm.rank()]);
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// Set the size of the MPI variable
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DamarisVar<int> mpi_rank_var(1, {"n_elements_local"}, "MPI_RANK", comm.rank());
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mpi_rank_var.setDamarisPosition({static_cast<int64_t>(elements_rank_offsets[comm.rank()])});
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return dam_err;
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}
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}
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