Commit Graph

4380 Commits

Author SHA1 Message Date
James McClure
d3dc35c018 fix bad ref to D3Q7 2022-04-22 14:30:03 -04:00
James McClure
481a258fbd read Membrane ion concentration list 2022-04-19 10:53:16 -04:00
James McClure
b51968c677 print membrane input concentration 2022-04-19 07:46:53 -04:00
James McClure
2cbb4ce8cd update print 2022-04-19 07:33:21 -04:00
James McClure
7eaaced8d9 add barriers to poisson solver 2022-04-18 08:45:49 -04:00
James McClure
e613cba376 remove print staetements 2022-04-16 17:14:22 -04:00
James McClure
b183252947 remove bad warnings 2022-04-15 22:50:16 -04:00
James McClure
85e99df3f3 add membrane concentration init 2022-04-14 22:57:23 -04:00
James McClure
aa8783141d small change 2022-04-13 20:39:59 -04:00
James McClure
adeecbd122 add GPU functions for d3q19 poisson 2022-04-12 23:29:46 -04:00
James McClure
8fd8799ff9 update cell example 2022-04-12 20:51:13 -04:00
James McClure
032a21a872 Poisson working pretty good now 2022-04-10 22:21:34 -04:00
James McClure
d0e41bf834 d319 poisson works good 2022-04-10 17:25:29 -04:00
James McClure
eb1c5da99c still broken wang 2022-04-10 16:08:35 -04:00
James McClure
cd970d64a3 Merge branch 'membrane-rex-d3q19' into membrane-wang 2022-04-10 12:34:31 -04:00
James McClure
b182d04833 tau from wang paper 2022-04-10 11:32:53 -04:00
James McClure
b3dfc014d8 rex d3q19 (broken) 2022-04-10 11:05:53 -04:00
James McClure
9c63613373 original wang poisson solver (broken) 2022-04-10 09:51:02 -04:00
James McClure
2bb2be845a membrane starts working ok... 2022-04-08 16:44:37 -04:00
James McClure
25b17f996c membrane transport test passing 2022-04-06 22:43:42 -04:00
James McClure
9c013e6169 testing membrane ion transport 2022-04-06 22:25:05 -04:00
James McClure
cca06f7964 add testing functions to ScaLBL 2022-04-06 20:44:14 -04:00
James McClure
4758bdffa9 refactor compact AA routines for testing 2022-04-06 20:34:12 -04:00
James McClure
3715ed98b0 Merge branch 'membrane' of github.com:JamesEMcClure/LBPM-WIA into membrane 2022-04-01 06:58:49 -04:00
James McClure
39a04e38ab getting ready to merge gpu 2022-04-01 06:58:43 -04:00
James E McClure
b6c2e7de3a update crusher script 2022-03-31 07:23:04 -04:00
James E McClure
cd34f11c38 cuda build succeeds 2022-03-28 18:59:30 -04:00
James E McClure
f99af45c9b Merge branch 'membrane' into tmp 2022-03-27 16:03:26 -04:00
James E McClure
6911e97c29 merge master with crusher 2022-03-27 16:02:56 -04:00
James E McClure
de2fe8b3a9 Merge branch 'master' of github.com:JamesEMcClure/LBPM-WIA 2022-03-27 16:01:20 -04:00
James McClure
8a0937e111 add sigmoid to ion equilibrium dist 2022-03-24 07:38:06 -04:00
James McClure
7172364660 update cell example 2022-03-22 20:03:34 -04:00
James McClure
2c3272e423 updates and fix for user input reader 2022-03-22 17:31:12 -04:00
James McClure
8ae69e4c1e start on hip function 2022-03-21 19:53:05 -04:00
James McClure
18602c7516 start on cuda function 2022-03-21 19:51:09 -04:00
James McClure
16275ce1b9 werkin 2022-03-21 19:44:21 -04:00
James McClure
0a1057926d start on cuda function 2022-03-21 19:44:04 -04:00
James McClure
286e779459 refining cell example 2022-03-20 18:01:19 -04:00
James McClure
4927e54707 add single cell example 2022-03-20 15:13:53 -04:00
James McClure
3522d35de1 read input files 2022-03-20 13:32:24 -04:00
James McClure
51c88f0055 cell simulator runs 2022-03-20 11:22:46 -04:00
James McClure
9e3a07d419 add python script to generate bubble 2022-03-20 09:30:46 -04:00
James McClure
a50d9e9aa6 add python script to generate bubble 2022-03-20 09:29:42 -04:00
James McClure
702eaae1c1 try at membrane simulator 2022-03-18 18:08:44 -04:00
James McClure
c94d4e5194 membrane structure in IonModel 2022-03-18 11:23:01 -04:00
James McClure
bfe1de6be2 membrane structure in IonModel 2022-03-18 11:20:09 -04:00
James McClure
bfa6f5e5b8 move membrane to common folder 2022-03-18 11:09:34 -04:00
James McClure
e8d0b0b48a adding membrane functions 2022-03-18 11:06:16 -04:00
James McClure
1abb9adea6 clean up relabel 2022-03-18 11:05:50 -04:00
zherexli
ece735e0e7 fix dumb print bug 2022-03-18 14:29:29 +11:00