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454 Commits

Author SHA1 Message Date
Tong Dong Qiu
b0749ce7d4 Use default parameters if json file does not specify all. 
Throw exception if json file cannot be parsed.
 2021-07-09 14:07:55 +02:00
Tong Dong Qiu
f77d745b51 Factor out CUDA part of amgclSolver 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
b2156a4edc Remove unused variable warnings 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
b28c96699b Combine blocked and unblocked VexCL implementations 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
5306ae6a60 Allow VexCL to use unblocked matrices 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
47ffeaf24a Allow VexCL to use runtime parameters 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
b4eb711c71 Enable the VexCL backend, disabled for blocksize=1 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
a3d8d6655f Added enum for amgcl_backend_type 2021-07-07 16:24:52 +02:00
Markus Blatt
adc2bf46b9 Search for VexCL and create an imported target. 
Unfortunately, we cannot us the imported targets. They add some compile
parameters using generator expressions based on the CXX_COMPILER_ID.
While we are using the system CXX compiler for most of the stuff, some
cuda code is compiled with nvcc which at least for some versions does
not support -Wno-catch-value (which gets passed as normal compiler
option).
 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
d45f9d08f7 Allow amgcl without CUDA 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
e556124405 Allow to choose amgcl backend at runtime, added default amgcl params 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
282f611f92 Make sure amgcl can be used without CUDA 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
3c1bfeb72f Let amgcl use runtime parameters via JSON file 2021-07-07 16:24:52 +02:00
Tong Dong Qiu
a23d881817 Reuse amgcl parameters 2021-07-07 16:24:51 +02:00
Tong Dong Qiu
47e2899ba8 Moved amgcl declarations to header 2021-07-07 16:24:51 +02:00
Tong Dong Qiu
7c7911b9bc Allow to use amgcl when CUDA and OpenCL are not found 2021-07-07 16:24:51 +02:00
Tong Dong Qiu
c2869810e2 Added amgclSolverBackend 2021-07-07 16:24:51 +02:00
Tong Dong Qiu
5918c64b54 Add useWellConn parameter to WellContributions() 2021-07-07 16:24:51 +02:00
Markus Blatt
8d0a254211
Merge pull request #3364 from blattms/flexible-solver-determine-pressure-idx-from-model 
Determine index of pressure from model used to increase usability
 2021-07-01 15:22:50 +02:00
Markus Blatt
2260fde478
Merge pull request #3300 from Tongdongq/add-tests 
Added tests for cusparseSolver and openclSolver
 2021-06-17 22:31:23 +02:00
Bård Skaflestad
dc7a6018f6
Merge pull request #3381 from akva2/boost_version_include 
fixed: add missing include for boost version
 2021-06-14 13:29:14 +02:00
Arne Morten Kvarving
54d928583b fixed: add missing include for boost version 2021-06-14 11:50:57 +02:00
Arne Morten Kvarving
86b454f4c8 fixed: initialize to avoid sca warning 2021-06-14 09:26:32 +02:00
Markus Blatt
db0f19ba88 Determine index of pressure from model used. 
Previously, the user had to specify it in the json file read from the
FlexibleSolver or 1 was used. Unfortunately, the index depends on the
model used and it seem rather opaque to a user what that index is.

With this commit we determine the pressure index from the model.
 2021-06-10 16:19:18 +02:00
Arne Morten Kvarving
b7e2ad3bfe added: PropertyTree class 
this is a thin wrapper around boost::property_tree
with this we avoid parsing property tree headers in all
simulator objects
 2021-06-09 15:21:52 +02:00
Arne Morten Kvarving
29ae002a87 changed: avoid templating in setupPropertyTree 
simply pass the required params to function instead.
 2021-06-09 12:54:14 +02:00
Tong Dong Qiu
74b46e4d8d Added tests for cusparseSolver and openclSolver 2021-06-07 11:40:03 +02:00
Tong Dong Qiu
0e63cda518 Instantiate whole class instead of each function 2021-06-07 11:40:03 +02:00
Markus Blatt
7c17db3d06 Fixes unused variable warnings for CUDA only. 2021-05-28 16:26:46 +02:00
Markus Blatt
6ffde47096 Fixes compilation with CUDA but without OpenCL. 
Using statements should not be in namespaces anyway...
 2021-05-28 16:26:46 +02:00
Arne Morten Kvarving
a4c0af09d9 fixed: do not use Opm:: prefix when inside namespace Opm 2021-05-05 11:59:18 +02:00
Bård Skaflestad
7be6e5bbf1
Merge pull request #3196 from akva2/use_forwarding 
Use forwarding where possible in some headers
 2021-04-30 16:00:41 +02:00
Arne Morten Kvarving
3c77b97cae MultisegmentWellContribution: remove unused members 2021-04-30 13:09:25 +02:00
Arne Morten Kvarving
b30fc4eac1 ExtractParallelGridInfoToISTL: use forwarding 2021-04-29 12:50:19 +02:00
Markus Blatt
824df60e94
Merge pull request #3150 from Tongdongq/always_print_prec_info 
Always print CHOW_PATEL info if used
 2021-04-21 19:51:22 +02:00
Arne Morten Kvarving
b9c19958fb fixed: mark possibly unused variables as such to quell warnings 
also take chance to break an extremely long line
 2021-04-19 09:49:20 +02:00
Tong Dong Qiu
5466b0f5f2 Always print CHOW_PATEL info if used 2021-04-09 16:19:45 +02:00
Tong Dong Qiu
8ea19c66aa Reduced code duplication in BdaBridge 2021-03-12 11:15:02 +01:00
Tong Dong Qiu
81c0a3d9f9 Simplified CPU fallback warnings 2021-03-12 11:15:02 +01:00
Giacomo Marchiori
b4aa28771f Added fpgaSolver 2021-03-12 11:14:59 +01:00
Markus Blatt
3ec181e231
Merge pull request #3089 from Tongdongq/exact-ilu-decomp-gpu 
Exact ilu decomp gpu
 2021-03-08 17:25:04 +01:00
Tong Dong Qiu
87e3f1d72d Added timers to ChowPatelIlu 2021-03-03 17:12:46 +01:00
Tong Dong Qiu
b87e9dad9a Updated comments 2021-03-03 16:36:27 +01:00
Tong Dong Qiu
0caae966b8 Add more waiting for opencl functions, using shortened opencl kernel params in WellContributions 2021-03-03 14:04:06 +01:00
Tong Dong Qiu
688d8ff627 Shorten opencl kernel params, add source file for openclKernels 2021-03-03 13:09:24 +01:00
Tong Dong Qiu
61bf85bf24 Add waiting for enqueueWriteBuffer 2021-03-03 10:37:01 +01:00
Tong Dong Qiu
18bf7c4b19 Replace diagfinding with std::find 2021-03-03 09:50:33 +01:00
Tong Dong Qiu
5b4deab7e4 Generating opencl kernels 2021-03-01 10:26:44 +01:00
Tong Dong Qiu
141af23db5 Exact ILU decomp is now performed on GPU 2021-03-01 10:26:35 +01:00
Tong Dong Qiu
748dc4ccb3 Reduced header inclusion, also moved WellContributions OpenCL initialization 2021-03-01 09:42:56 +01:00
Franz Georg Fuchs
17126ba229 throw specific error if json file does not exist 2021-02-24 11:31:36 +01:00
Markus Blatt
00df3d06c2 Allow usage of non-gpu devices with OpenCL. 
This is needed to use the CPU backend of PoCL http://portablecl.org/
which seems handy for debugging.
 2021-02-09 10:45:19 +01:00
tqiu
c8dca99fad Renamed fgpilu to ChowPatelIlu 2021-02-03 17:43:54 +01:00
tqiu
a64a342104 Added symmetry check in Debug mode 2021-02-01 11:19:38 +01:00
tqiu
363cc31316 Made waiting for a GPUcopy more explicit 2021-01-28 15:40:10 +01:00
tqiu
d222dffcfd Improved initial guess of L 2021-01-28 13:46:01 +01:00
tqiu
837a83fc16 Added error checking and std::call_once 2021-01-26 17:32:18 +01:00
tqiu
1e09b1f4d9 Added comments and rewrote if 2021-01-26 15:42:38 +01:00
tqiu
dba20adf04 Bugfix: extra swap was done on odd number of sweeps 2021-01-20 11:00:30 +01:00
tqiu
48ebef7808 Updated comments 2021-01-19 11:06:39 +01:00
tqiu
123e3fa89e Use std::find and added comments 2021-01-18 17:10:46 +01:00
tqiu
a8e524fc9d Minor C to C++ changes 2021-01-18 14:11:07 +01:00
tqiu
0f9ae3695d Made reordering optional for WellContributions 
Removed unnecessary alloc
 2021-01-13 12:34:56 +01:00
tqiu
f26e58c6ca Reordering is now actually skipped when NONE is chosen. 
Also made reordering optional for openclSolver.
 2021-01-12 15:25:47 +01:00
tqiu
71692ff52b Disabled FGPILU by default 2021-01-12 15:21:19 +01:00
tqiu
9f92a69037 Added CPU and GPU implementations of Fine-Grained Parallel ILU (FGPILU) 2021-01-12 15:21:19 +01:00
Markus Blatt
c037bd762d
Merge pull request #2990 from atgeirr/testing-precfactory-operators 
Only add AMG preconditioners to factory if sensible.
 2020-12-22 09:52:53 +01:00
Atgeirr Flø Rasmussen
d910d42f6e Only add AMG preconditioners to factory if sensible. 
Also add test using a new operator class, that would not compile
without the change.
 2020-12-17 14:54:59 +01:00
Markus Blatt
065e2f34f1 Do not include config.h in header (not even in *_impl.hpp) 
I was getting warnings about redefined definitions (e.g. HAVE_PARMETIS).
 2020-12-11 17:53:24 +01:00
Atgeirr Flø Rasmussen
374764fc6f
Merge pull request #2946 from atgeirr/add-more-amg-options 
Add more AMG options to allow setting from JSON.
 2020-11-27 08:57:04 +01:00
Atgeirr Flø Rasmussen
6e31c77234 Add more AMG options to allow setting from JSON. 2020-11-26 15:37:50 +01:00
Tor Harald Sandve
f924ac7ffe
Merge pull request #2933 from totto82/dunefem 
WIP make Flow compile with dune-fem
 2020-11-26 15:10:34 +01:00
Atgeirr Flø Rasmussen
a0ca8dd0b5 Use better-suited AMG criterion. 
Use SymmetricDependency instead of SymmetricMatrixDependency.
Our matrices are structurally symmetric, but not numerically symmetric.
 2020-11-25 16:40:03 +01:00
Markus Blatt
b21b6cf28c
Merge pull request #2914 from ducbueno/rm-oclcontainer 
Removed WellContributionsOCLContainer class
 2020-11-19 21:27:55 +01:00
Tor Harald Sandve
c4c0b7a756 Make it compile with dune-fem 2020-11-19 15:45:37 +01:00
Markus Blatt
ea3c899080
Merge pull request #2882 from atgeirr/msw-add-well-contrib 
Implement addWellContributions() for multi-segment wells
 2020-11-18 13:44:24 +01:00
Jose Eduardo Bueno
a9c2a684c6 Removed WellContributionsOCLContainer class (rebase) 2020-11-18 09:14:31 -03:00
Markus Blatt
64fa5a2b30
Merge pull request #2858 from Tongdongq/ilu-reorder-strategy 
Added cmdline parameter --ilu-reorder-strategy
 2020-11-17 09:35:12 +01:00
Atgeirr Flø Rasmussen
db7cd1053f Add the multMatrixImpl() utility. 2020-11-16 11:37:44 +01:00
Tor Harald Sandve
fbccdbf68e Make a flow version that uses the polyhedreal grid 
Currently the simulator creats the polyhedreal grid from an eclGrid from opm-common

TODO
 - make it possible to create the grid directly from DGF or MRST format
 - fix issue on norne.
 2020-11-10 15:49:59 +01:00
Atgeirr Flø Rasmussen
adfb8ef771
Merge pull request #2898 from blattms/always-accu-to-one-proc-as-default 
Always accumulates data in AMG to 1 process on coarse levels.
 2020-11-05 15:41:57 +01:00
Markus Blatt
d83ae17e5b Always accumulates data in AMG to 1 process on coarse levels. 
In OPM the matrix graph might be unsymmetric as we do not store
the full sparsity pattern for copy rows but only the diagonal.
Unfortunately, DUNE assumes that matrices from finite elements and
finite volumes have a symmetric sparsity pattern for copy rows to
and uses this assumption to create the graphs for PTScotch/ParMETIS
more easily. But PTScotch/ParMetis assume a symmetric graph.
 2020-11-03 22:13:27 +01:00
Arne Morten Kvarving
4121e0a3c4 fix typo 2020-11-03 13:48:09 +01:00
tqiu
d25405d39a Renamed parameter to OpenclIluReorder and moved error checking to BdaBridge constructor. 2020-10-19 11:36:25 +02:00
tqiu
a372a1e4bd Added cmdline parameter --ilu-reorder-strategy 2020-10-19 11:33:32 +02:00
Atgeirr Flø Rasmussen
e7d1d6603a Silence unused argument warning. 2020-10-19 09:13:37 +02:00
Bård Skaflestad
9a71bbe4b0 Move 'gridForConn' Into Cuda/OpenCL Block 
It is only used within this context and produces a warning of the
form

  ISTLSolverEbos.hpp:128:25: warning: unused variable ‘gridForConn’

unless the build configures accelerator support.
 2020-10-19 02:28:05 +02:00
Markus Blatt
44fadfb88a Fixes compilation of CUDA. 
nvcc exits compilation if the header dune/istl/basearray.hh (form DUNE
2.6) is included as it does not seem to understand the friend declaration
there (friend class for a struct).

```
/usr/include/dune/istl/basearray.hh:101:49: error: ‘typename Dune::Imp::base_array_unmanaged<B, A>::RealIterator’ names ‘template<class B, class A> template<class T> struct Dune::Imp::base_array_unmanaged<B, A>::RealIterator’, which is not a type
       friend class RealIterator<const ValueType>;
                                                 ^
```
 2020-10-14 19:23:57 +02:00
Atgeirr Flø Rasmussen
43d5d2c532
Merge pull request #2850 from atgeirr/silence-warnings 
Silence warnings from range-for.
 2020-10-13 08:19:48 +02:00
Atgeirr Flø Rasmussen
ea0abd1331 Bugfix: do not substr() on too small strings. 2020-10-12 21:58:58 +02:00
Atgeirr Flø Rasmussen
dedbe78cee Copyright additions. 2020-10-12 17:06:11 +02:00
Atgeirr Flø Rasmussen
316b28923d Rename parameter --linear-solver-configuration to --linsolver. 2020-10-12 17:03:00 +02:00
Atgeirr Flø Rasmussen
f169cf90d8 Remove --linear-solver-configuration-file parameter. 
This is now handled by passing a string to --linear-solver-configuration that
ends with ".json".
 2020-10-12 16:41:09 +02:00
Atgeirr Flø Rasmussen
f262eec9bf Silence warnings from range-for. 2020-10-12 09:39:37 +02:00
Atgeirr Flø Rasmussen
385880485a Fix logic of shouldCreateSolver(). 2020-10-11 22:46:02 +02:00
Atgeirr Flø Rasmussen
30a4fe55b0 Add "amg" option to --linear-solver-configuration. 2020-10-11 09:31:48 +02:00
Atgeirr Flø Rasmussen
842afd312e Refactor setupPropertyTree(). 2020-10-11 09:24:05 +02:00
Atgeirr Flø Rasmussen
00438c4860 Remove unused parts (not just comment out). 2020-10-11 08:44:21 +02:00
Atgeirr Flø Rasmussen
0a70d95bee Refactor shouldCreateSolver(). 2020-10-11 08:20:19 +02:00
Atgeirr Flø Rasmussen
1c208e9a92 Avoid unnecessary extra matrix manipulation. 
When using the ParallelOverlappingILU0 it is not necessary to fix the overlap rows.
 2020-10-10 10:09:23 +02:00
Atgeirr Flø Rasmussen
65817c9068 Removed old amg/cpr code that can be replaced. 
The replacement consists of using the FlexibleSolver code.
 2020-10-08 15:12:41 +02:00
Markus Blatt
ec884183a5
Merge pull request #2828 from blattms/add-mswells 
[opencl] deletes assignment operator of WellContributionsOCLContainer
 2020-10-01 22:35:09 +02:00
Markus Blatt
e8c030be17
Merge pull request #2821 from ducbueno/add-mswells 
Reintroduced multisegment wells to OpenCL backend
 2020-10-01 21:52:25 +02:00
Markus Blatt
684b58564c use auto in for-loop as at other occasions. 2020-10-01 15:56:50 +02:00
Markus Blatt
f306f78737 Delete assignment operator of WellContributionsOCLContainer, too 2020-10-01 15:55:57 +02:00
Jose Eduardo Bueno
fbbb21d482 Removed smart pointers; + delete for copy constr 2020-10-01 10:27:34 -03:00
Jose Eduardo Bueno
89cefd8d95 Fixed seg fault when there are only mswells 2020-09-30 18:34:50 -03:00
Jose Eduardo Bueno
7aad035bcf Added smart pointers 2020-09-30 17:31:35 -03:00
Markus Blatt
d30f6d272b [gpu] Support UMFPack with DUNE 2.7 
The index type changed from int to long int with 2.7.
 2020-09-30 20:10:21 +02:00
Jose Eduardo Bueno
3a680f728e Removed unnecessary vector clear operations 2020-09-30 09:14:20 -03:00
Jose Eduardo Bueno
99e4419b3c Reintroduced multisegment wells 2020-09-30 09:11:20 -03:00
Jose Eduardo Bueno
a3a15a744c Corrected kernel 2020-09-28 18:06:13 -03:00
Jose Eduardo Bueno
9fe6ee85a4 Throws exception if well dimensions aren't correct 2020-09-28 18:01:42 -03:00
Jose Eduardo Bueno
268bcd95e8 Implemented reinit; reduced sync events 2020-09-28 17:27:12 -03:00
Jose Eduardo Bueno
bedf3d16cf Querying number of work items with get_local_size 2020-09-28 12:56:22 -03:00
Jose Eduardo Bueno
77bcadff45 Events wellContribs write calls & update sparsity 2020-09-28 09:40:39 -03:00
Jose Eduardo Bueno
d653873735 Added destructor for WellContributionsOCLContainer 2020-09-28 09:15:17 -03:00
Jose Eduardo Bueno
d236079173 Bug fixes 2020-09-25 11:31:17 -03:00
Jose Eduardo Bueno
ab57d5ecd2 Fixed errors 2020-09-24 18:07:10 -03:00
Jose Eduardo Bueno
1ba81cece2 First commit 2020-09-24 16:35:36 -03:00
Jose Eduardo Bueno
c43648076f Fixed kernel; fixed time step chopping; 2020-09-24 16:35:36 -03:00
Jose Eduardo Bueno
c41aafcc58 Simplified initialize_wellContribs calls 2020-09-24 16:35:36 -03:00
Joakim Hove
0565d6f402 Remove unused #include of exceptions 2020-09-21 11:12:15 +02:00
Markus Blatt
53005c477d
Merge pull request #2762 from ducbueno/opencl-stdwell-clean 
Fixed out of resources problem
 2020-09-03 19:50:39 +02:00
Jose Eduardo Bueno
525faf7b5d Changed work_group_size 2020-09-03 14:25:50 -03:00
Jose Eduardo Bueno
f8898e3158 New function for setting OpenCL in wellContribs 2020-09-03 13:30:12 -03:00
Arne Morten Kvarving
273d465c32 fixed: use the proper linear operator without wells in matrix in serial 2020-09-03 15:53:57 +02:00
Jose Eduardo Bueno
c7adc3495f Initial commit 2020-09-03 09:46:44 -03:00
Markus Blatt
27931c4303 [opencl] Fixes shadowing variable warnings. 
These seemed familar and I would have sworn that I already fixed them
somewhen. Might have been reintroduced by rebasing.
 2020-09-02 22:46:44 +02:00
Markus Blatt
e997d7b130
Merge pull request #2751 from ducbueno/opencl-stdwell-clean 
AddStandardWell functionality in OpenCL backend
 2020-09-02 22:02:05 +02:00
Jose Eduardo Bueno
4d10d9ac76 Fixed issue when no std wells are present 2020-09-02 15:44:46 -03:00
Jose Eduardo Bueno
56c1c0862c Added StandardWell functionality to OpenCL backend 2020-09-02 15:00:34 -03:00
Arne Morten Kvarving
7305f84351 use std::make_unique where applicable 2020-09-02 15:35:39 +02:00
Arne Morten Kvarving
3b21a8a481 changed: remove SET_TYPE_PROP macro usage 2020-08-28 10:44:53 +02:00
Arne Morten Kvarving
93a3ebf8f7 changed: remove NEW_PROP_TAG macro usage 2020-08-28 10:44:53 +02:00
Arne Morten Kvarving
941e4916f8 changed: remove SET_PROP macro usage 2020-08-27 14:02:05 +02:00
Arne Morten Kvarving
7d853d2e05 changed: remove SET_SCALAR_PROP macro usage 2020-08-27 13:01:51 +02:00
Arne Morten Kvarving
fca83318aa changed: remove SET_INT_PROP macro usage 2020-08-27 13:01:51 +02:00
Arne Morten Kvarving
a79c37a041 changed: remove SET_STRING_PROP macro usage 2020-08-27 13:01:51 +02:00
Arne Morten Kvarving
0e71c0e29b changed: remove SET_BOOL_PROP macro usage 2020-08-27 13:01:51 +02:00
Arne Morten Kvarving
e8248b44ff changed: remove NEW_TYPE_TAG macro usage 2020-08-27 13:01:51 +02:00
Arne Morten Kvarving
914053ac3c changed: remove GET_PROP_VALUE macro usage 2020-08-27 13:01:51 +02:00
Arne Morten Kvarving
74fac38d85 changed: remove GET_PROP_TYPE / GET_PROP macro usage 2020-08-27 08:19:39 +02:00
Arne Morten Kvarving
70908d9017 changed: remove BEGIN_PROPERTIES/END_PROPERTIES macro usage 2020-08-21 15:50:35 +02:00
Markus Blatt
5743a979e3 Formatting: added missing space. 2020-08-07 09:38:10 +02:00
Markus Blatt
8d3eac81a5 [OpenCL] Fixes out of bounds read in reordering code in ILU0. 
rowPerColor only has size numColors!
 2020-08-05 21:22:01 +02:00
Markus Blatt
c28a12636a Also free memory allocated with CUDA also with CUDA 
With multisegment wells we allocate WellContributions::hx and hy with
`CudaMallocHost`. Yet we tried to deallocate them with
`delete[]`. This caused segementation faults e.g. for
model1/MSW_MODEL_1. Now we use `CudaFreeHost` for freeing if we used
CUDA.

Closes #2719
 2020-08-04 12:54:27 +02:00
Markus Blatt
f37fa8bbd9 Prevent unused variable warnings without CUDA in WellContributions. 2020-07-21 11:24:19 +02:00
Markus Blatt
59064b4ac2 Prevent warning about shadowing dim_wells and dim. 2020-07-10 13:40:38 +02:00
Markus Blatt
efd3aeb290 Catch exceptions by const reference to prevent warnings. 
e.g. gcc issued: "warning: catching polymorphic type ‘class cl::Error’ by value [-Wcatch-value=]"
 2020-07-10 13:40:38 +02:00