James McClure
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1ed3428ef6
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re-run clang format
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2023-10-23 04:18:20 -04:00 |
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James McClure
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588d1a15c1
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updates from ScaLBL
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2023-10-22 09:53:45 -04:00 |
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James McClure
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111529ff5e
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add voltage BC for d3q19 poisson solver
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2022-10-27 08:15:21 -04:00 |
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James McClure
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f1ceb930ee
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working on read/write for membrane coefficients
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2022-10-26 16:16:59 -04:00 |
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James McClure
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ffe4f794de
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fix swc stuff try 3
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2022-08-27 16:30:03 -04:00 |
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James McClure
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9229de2875
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fix swc stuff try 2
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2022-08-27 16:06:30 -04:00 |
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James McClure
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fc4af2d712
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fix swc thing
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2022-08-27 15:40:32 -04:00 |
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Mark Berrill
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3cc12ac36e
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Fixing memory leaks
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2022-07-13 11:20:53 -04:00 |
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Mark Berrill
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ed8f5684fd
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Fixing memory leak
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2022-07-13 10:53:19 -04:00 |
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James McClure
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5204f48d45
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fix memory leaks
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2022-07-12 18:44:36 -04:00 |
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James McClure
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a9ed4a3b97
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fix bug with SWC
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2022-07-04 19:46:14 -04:00 |
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James McClure
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dc78491a9c
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add offset to Domain for swc
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2022-05-25 17:59:08 -04:00 |
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James McClure
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df27167212
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SWC reader update 2
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2022-05-25 16:28:58 -04:00 |
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James McClure
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57fc4cc8e1
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SWC reader update
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2022-05-25 16:21:34 -04:00 |
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James McClure
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e818ade293
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shift swc data
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2022-05-16 21:43:53 -04:00 |
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James McClure
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175e7bd00b
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swc reader works with MPI
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2022-05-16 11:22:38 -04:00 |
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James McClure
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c4a97c0589
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support for SWC input format
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2022-05-16 11:17:47 -04:00 |
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James McClure
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0e65364954
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added support for swc file
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2022-05-15 23:00:23 -04:00 |
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James McClure
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2acaa335aa
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added membrane analysis capability
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2022-05-13 20:44:33 -04:00 |
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James E McClure
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b6227dd823
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multiple nvidia gpu working with membrane
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2022-05-12 20:50:05 -04:00 |
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James McClure
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ad8c5f6e26
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communication seems to work
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2022-05-12 00:52:34 -04:00 |
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James McClure
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29e4c76561
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membrane test works with new comm
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2022-05-12 00:31:22 -04:00 |
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James McClure
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7c790e8802
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updating membrane communication structure
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2022-05-11 23:37:18 -04:00 |
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James McClure
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2894b740d0
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add functions to copy send / recv list from ScaLBL
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2022-05-11 17:12:23 -04:00 |
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James McClure
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4661cbdce4
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debug gpu
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2022-05-11 14:05:16 -04:00 |
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James McClure
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e677b0395f
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add barrier to membrane transport
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2022-05-09 06:32:58 -04:00 |
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James McClure
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c424e1d984
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cleanup with help from valgrind
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2022-05-06 16:21:37 -04:00 |
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Zhe Rex Li
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6959a02f7b
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correct ion LB collison
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2022-05-03 15:00:00 +10:00 |
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Zhe Li
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bdd0efd36e
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build passed
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2022-04-28 16:55:58 +10:00 |
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James McClure
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e3518e3482
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added membrane properties to input db
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2022-04-26 18:07:26 -04:00 |
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James McClure
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3e82370d6c
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update cpu ion valence
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2022-04-26 06:37:08 -04:00 |
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James E McClure
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3642a6ae9b
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debug charge density problems on crusher
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2022-04-24 15:55:23 -04:00 |
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James E McClure
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9043751281
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debug crusher
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2022-04-24 14:55:59 -04:00 |
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James E McClure
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36a5204882
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a bunch of summit debug things to roll back later
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2022-04-24 11:04:11 -04:00 |
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James McClure
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cf4f2b63da
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update error analysis for Poisson solver
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2022-04-22 15:17:52 -04:00 |
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James McClure
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2cbb4ce8cd
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update print
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2022-04-19 07:33:21 -04:00 |
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James McClure
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e613cba376
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remove print staetements
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2022-04-16 17:14:22 -04:00 |
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James McClure
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b183252947
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remove bad warnings
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2022-04-15 22:50:16 -04:00 |
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James McClure
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adeecbd122
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add GPU functions for d3q19 poisson
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2022-04-12 23:29:46 -04:00 |
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James McClure
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032a21a872
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Poisson working pretty good now
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2022-04-10 22:21:34 -04:00 |
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James McClure
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9c63613373
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original wang poisson solver (broken)
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2022-04-10 09:51:02 -04:00 |
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James McClure
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2bb2be845a
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membrane starts working ok...
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2022-04-08 16:44:37 -04:00 |
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James McClure
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9c013e6169
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testing membrane ion transport
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2022-04-06 22:25:05 -04:00 |
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James McClure
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cca06f7964
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add testing functions to ScaLBL
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2022-04-06 20:44:14 -04:00 |
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James E McClure
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f99af45c9b
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Merge branch 'membrane' into tmp
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2022-03-27 16:03:26 -04:00 |
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James McClure
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2c3272e423
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updates and fix for user input reader
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2022-03-22 17:31:12 -04:00 |
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James McClure
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16275ce1b9
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werkin
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2022-03-21 19:44:21 -04:00 |
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James McClure
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4927e54707
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add single cell example
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2022-03-20 15:13:53 -04:00 |
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James McClure
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51c88f0055
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cell simulator runs
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2022-03-20 11:22:46 -04:00 |
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James McClure
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702eaae1c1
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try at membrane simulator
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2022-03-18 18:08:44 -04:00 |
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